BDGP Sequence Production Resources |
Search the DGRC for RH11203
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 112 |
Well: | 3 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG6463-RA |
Protein status: | RH11203.pep: gold |
Preliminary Size: | 690 |
Sequenced Size: | 612 |
Gene | Date | Evidence |
---|---|---|
CG6463 | 2001-12-13 | Blastp of sequenced clone |
CG6463 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6463 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6463 | 2008-04-29 | Release 5.5 accounting |
CG6463 | 2008-08-15 | Release 5.9 accounting |
CG6463 | 2008-12-18 | 5.12 accounting |
612 bp (612 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070675
> RH11203.complete GCTCGACACTTCACAGCACTGGGCAACAGCTGTTACAAAATAAAGTCGTG CGGAAAATTAAGCATTTTCGGCTAAAAGTCTATTGCAAACATGGCCAAGA TCATTAAGGCGTCCACAGGTTTGACTGGACTCGCCGTGTCCACCAATCCA CACCACACGCTGAGTGCTCTGTATGGCAAGATTCTGCGGGCGGTGTCCAA GATGCCACAGGACGCCAGCTACCGCAAGTACACGGAGCAACTGGTCAAGC AGCGCGCCGATTCTGTGGCCCAACACAAGGACATCACTGCCCTGGAAAAG GCCGTCGGTTGCGGTCAAGTGGAGGAGCTAATTGTCCAGGCCGAGAACGA GCTGATCCTTGCGCGCAAAATGCTCGGCTGGAAGCCCTGGGAGAAGTTGG TCCAAGCCGCGCCTGCCAAGCAGTGGGACTGGCCACCAGCCCAGATCATG GAGCCCAAGGTTTAGATTCACACTTAGTACTAATTAATCTACAGCAAATC GAAATGAGAAGAGAGCAATAAATCCGTTGATAAGCCAGTGGCTTTATCAG CTAAAAAATAATTGAGCTTTAATCAAATGAATAAACCTGGAACAGCAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6463-RA | 729 | CG6463-RA | 38..633 | 2..597 | 2980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 10684515..10684813 | 572..274 | 1450 | 99 | Minus |
chr3L | 24539361 | chr3L | 10685006..10685168 | 273..111 | 755 | 97.5 | Minus |
chr3L | 24539361 | chr3L | 10685296..10685407 | 111..2 | 465 | 96.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 10693183..10693506 | 597..274 | 1620 | 100 | Minus |
3L | 28110227 | 3L | 10693706..10693868 | 273..111 | 815 | 100 | Minus |
3L | 28110227 | 3L | 10693997..10694106 | 111..2 | 550 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 10686283..10686606 | 597..274 | 1620 | 100 | Minus |
3L | 28103327 | 3L | 10686806..10686968 | 273..111 | 815 | 100 | Minus |
3L | 28103327 | 3L | 10687097..10687206 | 111..2 | 550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 10684474..10684502 | 568..596 | 96 | <- | Minus |
chr3L | 10684520..10684813 | 274..567 | 98 | <- | Minus |
chr3L | 10685006..10685167 | 112..273 | 97 | <- | Minus |
chr3L | 10685296..10685407 | 1..111 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..375 | 91..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..375 | 91..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..375 | 91..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..375 | 91..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..375 | 91..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..595 | 2..596 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..595 | 2..596 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..597 | 1..596 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..595 | 2..596 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6463-RA | 1..597 | 1..596 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10693184..10693506 | 274..596 | 100 | <- | Minus |
3L | 10693706..10693867 | 112..273 | 100 | <- | Minus |
3L | 10693997..10694106 | 1..111 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10693184..10693506 | 274..596 | 100 | <- | Minus |
3L | 10693706..10693867 | 112..273 | 100 | <- | Minus |
3L | 10693997..10694106 | 1..111 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10693184..10693506 | 274..596 | 100 | <- | Minus |
3L | 10693706..10693867 | 112..273 | 100 | <- | Minus |
3L | 10693997..10694106 | 1..111 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 10686284..10686606 | 274..596 | 100 | <- | Minus |
arm_3L | 10686806..10686967 | 112..273 | 100 | <- | Minus |
arm_3L | 10687097..10687206 | 1..111 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10686284..10686606 | 274..596 | 100 | <- | Minus |
3L | 10686806..10686967 | 112..273 | 100 | <- | Minus |
3L | 10687097..10687206 | 1..111 | 99 | Minus |
Translation from 90 to 464
> RH11203.hyp MAKIIKASTGLTGLAVSTNPHHTLSALYGKILRAVSKMPQDASYRKYTEQ LVKQRADSVAQHKDITALEKAVGCGQVEELIVQAENELILARKMLGWKPW EKLVQAAPAKQWDWPPAQIMEPKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6463-PA | 124 | CG6463-PA | 1..124 | 1..124 | 639 | 100 | Plus |
Translation from 90 to 464
> RH11203.pep MAKIIKASTGLTGLAVSTNPHHTLSALYGKILRAVSKMPQDASYRKYTEQ LVKQRADSVAQHKDITALEKAVGCGQVEELIVQAENELILARKMLGWKPW EKLVQAAPAKQWDWPPAQIMEPKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23822-PA | 124 | GF23822-PA | 1..124 | 1..124 | 557 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13964-PA | 124 | GG13964-PA | 1..124 | 1..124 | 636 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15571-PA | 124 | GH15571-PA | 1..124 | 1..124 | 573 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-13B-PA | 124 | CG6463-PA | 1..124 | 1..124 | 639 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16846-PA | 124 | GI16846-PA | 1..124 | 1..124 | 599 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20740-PA | 124 | GL20740-PA | 1..124 | 1..124 | 603 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19615-PA | 124 | GA19615-PA | 1..124 | 1..124 | 603 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24801-PA | 124 | GM24801-PA | 1..124 | 1..124 | 640 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12852-PA | 124 | GD12852-PA | 1..124 | 1..124 | 640 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12596-PA | 124 | GJ12596-PA | 1..124 | 1..124 | 594 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16793-PA | 124 | GK16793-PA | 1..124 | 1..124 | 583 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20262-PA | 124 | GE20262-PA | 1..124 | 1..124 | 645 | 100 | Plus |