BDGP Sequence Production Resources |
Search the DGRC for RH12290
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 122 |
Well: | 90 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9691-RA |
Protein status: | RH12290.pep: gold |
Preliminary Size: | 505 |
Sequenced Size: | 549 |
Gene | Date | Evidence |
---|---|---|
CG9691 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9691 | 2002-04-22 | Blastp of sequenced clone |
CG9691 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9691 | 2008-04-29 | Release 5.5 accounting |
CG9691 | 2008-08-15 | Release 5.9 accounting |
CG9691 | 2008-12-18 | 5.12 accounting |
549 bp (549 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113568
> RH12290.complete GGACCGCCGTCTCGGAGCGGAGCGATCAGTCAGTCGCGTTGTCAAGCTGA AAGCGTAAAGATGAAATCGCTCGTTGTGTGCTCTTTGATCGGATTGGTCC TGCTTATGGCCGCTGGCCAAGTTCGTGCCGAGTGCGACGAGGCCAAGAGT CCCGAGGACAGCGAATTCAAGCACTTCTTCAAGAACCTAGGCTGCAAGGT CAACCAGGGGGCCAAGGAGGTGGCCGAGGCCGCCAAGCCCTACACCGACA AGATCGGCGAGGGCGCCAAGGAGTTTGGCAGCTCGGTGGCCCAGAAGTAC GACGAACTGAAGCACAAGCTGACCGATGAGCCATCGACCACGCCCAAAAT TCCAGTGGCCTATGACGCCCCCACCGAGAAGGTCCTTTTAGCCCCCATCG GAGGACCCAGCACCCCGATCCCATGAGGGATTTTGCAATCGCTTGAAGGT CCCCTCCGTCTCGTTGCATAAGTTTTCTTTGTTTTTTTTTTTTTCTTTGT GATCTATATTAATAAAAACTAAAGTGATGTTGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dhet\Uhu | 1658 | Dhet\Uhu DHUHUH3 1658bp AKA(S51651) Derived from X63028 (Rel. 36, Last updated, Version 7). | 1459..1531 | 464..531 | 110 | 65.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9776148..9776574 | 1..427 | 99 | -> | Plus |
chrX | 9776644..9776751 | 428..533 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 1..366 | 61..426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 1..366 | 61..426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RB | 1..366 | 61..426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 1..366 | 61..426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RB | 1..366 | 61..426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 2..534 | 2..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 2..534 | 2..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 2..534 | 2..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 2..534 | 2..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9691-RA | 2..534 | 2..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9884442..9884868 | 1..427 | 99 | -> | Plus |
X | 9884938..9885044 | 428..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9884442..9884868 | 1..427 | 99 | -> | Plus |
X | 9884938..9885044 | 428..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9884442..9884868 | 1..427 | 99 | -> | Plus |
X | 9884938..9885044 | 428..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9778475..9778901 | 1..427 | 99 | -> | Plus |
arm_X | 9778971..9779077 | 428..533 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9892540..9892966 | 1..427 | 99 | -> | Plus |
X | 9893036..9893142 | 428..533 | 99 | Plus |
Translation from 0 to 425
> RH12290.hyp RPPSRSGAISQSRCQAESVKMKSLVVCSLIGLVLLMAAGQVRAECDEAKS PEDSEFKHFFKNLGCKVNQGAKEVAEAAKPYTDKIGEGAKEFGSSVAQKY DELKHKLTDEPSTTPKIPVAYDAPTEKVLLAPIGGPSTPIP*
Translation from 60 to 425
> RH12290.pep MKSLVVCSLIGLVLLMAAGQVRAECDEAKSPEDSEFKHFFKNLGCKVNQG AKEVAEAAKPYTDKIGEGAKEFGSSVAQKYDELKHKLTDEPSTTPKIPVA YDAPTEKVLLAPIGGPSTPIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19140-PA | 124 | GF19140-PA | 25..111 | 22..108 | 334 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18331-PA | 121 | GG18331-PA | 1..121 | 1..121 | 603 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11809-PA | 138 | GH11809-PA | 1..115 | 1..119 | 360 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9691-PA | 121 | CG9691-PA | 1..121 | 1..121 | 625 | 100 | Plus |
CG9691-PB | 121 | CG9691-PB | 1..121 | 1..121 | 625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15992-PA | 131 | GI15992-PA | 17..119 | 18..119 | 338 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16381-PA | 123 | GL16381-PA | 1..120 | 1..119 | 409 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21967-PA | 123 | GA21967-PA | 1..120 | 1..119 | 409 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11397-PA | 121 | GM11397-PA | 1..121 | 1..121 | 607 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24780-PA | 102 | GD24780-PA | 44..102 | 63..121 | 292 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18720-PA | 131 | GJ18720-PA | 1..119 | 1..119 | 367 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25363-PA | 127 | GK25363-PA | 1..119 | 1..121 | 402 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17818-PA | 121 | GE17818-PA | 1..121 | 1..121 | 612 | 96.7 | Plus |