BDGP Sequence Production Resources |
Search the DGRC for RH13513
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 135 |
Well: | 13 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Zip99C-RC |
Protein status: | RH13513.pep: gold |
Preliminary Size: | 1242 |
Sequenced Size: | 1838 |
Gene | Date | Evidence |
---|---|---|
CG7816 | 2002-10-18 | Blastp of sequenced clone |
CG7816 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7816 | 2008-04-29 | Release 5.5 accounting |
CG7816 | 2008-08-15 | Release 5.9 accounting |
CG7816 | 2008-12-18 | 5.12 accounting |
1838 bp (1838 high quality bases) assembled on 2002-10-18
GenBank Submission: BT001774
> RH13513.complete GATTGTATTTTCCGCACGGCCCTCGAACAAAGTAAACAAATGTATAAATG CATGTGTTTTTGGCGAGCTTGTAACTGTTAGTGAAGCGACGCGCGGAGCG ACGACATCAACATTAAGCCCGTGTTTCGAGTTAGGCGAGGCCAGGCGTAC GTTTAACCCACGCAGAGCCCGGGCGAAATAAACGTAAATTCACGCAATTA CTTCGCAGTAAAAAAAGCATCGGGTGCCAATGATCGCTACTACGCAATAG AAAAGTAATTTATCATACAATTTCGCCACTGCAAAAATCGAAAGTTTCGG GTTTTATTCCCTGCTATAAAAGTGATAAGAGCACGTTAACCCGTTCCTGT TACAGCTGAATAACGCCGAGTCATCATCGATCACGGCACATACTCCACCG AAAGTCACTGGACATGAGCAGGCAGCAGTGACTGAAGAAACCCAACCCAG TTCCAGCACAGAGCAGCGCATAAGTAGCCGTAAAAAGGCAGCCGAAAATG ACCACGAACAGCAGCTTCTTCGATGAACACATCGCCATGATATACTCCAA CCTGATGGACCAGTACATGCCCGAGTACTTCAAAAGCTTTGAGTACACGC CATGGGTTTTCTCCCTGCTGGGATCGGTGGTAATTGGACTGAGTGGCATA TTCCCGCTGATCATCATTCCCACGGAGGAGAAAATGGCTAAGGAGGGATA CAAAGATCCTGCAGATTCAAAACTCCTGCGAGTGCTTCTGAGTTTCGCGG TCGGCGGTCTGCTGGGCGATGTGTTCCTTCACCTGTTGCCAGAAGCCTGG GAGGGCGATAATCAAGATCCTTCTAGTCACCCATCCCTGCGCTCGGGCCT TTGGGTACTTTCCGGCATACTGATCTTCACGATCGTGGAGAAAATCTTTT CCGGATATGCCAGCGCGGACGAGGAGAACCCTCAGCCCAAGTGCGTGGAG ATAGCCAACTGCCTGTTGCGTCGACATGGCGGCCAACTACCAGAGGGCGA AACCTCTGAGAGTTGTGGCGGCGCCTGCGACATCGAAGATGTAGGTAAAG TCTGTTTCCTACGCGAGCAGGAACAGAAGTCAAAGGAAAGGAAGGAACAG CCGAAGAAGGTGGCTGGTTATCTGAACCTCTTGGCCAACTCAATTGACAA TTTCACACACGGTCTAGCCGTGGCTGGATCCTTTTTGGTGTCCTTCAGAC ACGGCATTCTAGCCACTTTTGCCATATTGCTTCATGAAATTCCGCACGAG GTGGGGGATTTCGCAATCCTGCTTCGATCCGGATTCAGTCGCTGGGACGC CGCGCGTGCGCAACTACTCACGGCGGGAGCTGGCCTGCTCGGTGCTCTGG TGGCCATCGGAGGCTCCGGCGTAACGTCGGCCATGGAGGCACGTACTTCG TGGATTATGCCGTTCACCGCCGGCGGCTTTCTGCACATTGCTCTGGTCAC AGTATTACCTGATCTCTTGAAGGAGGAGGAGCGCAAGGAGTCCATTAAGC AGCTGCTAGCACTGGTATTTGGCATTGCGTTAATGGCCGTGATGACCATG CTATTCGAACACTAGGAACTTTAGCTGACAGCAGTATAAGAAGAAAATTG AAAGCAGTTTTTAGTTTGTTCTAAGATTGTCATTGGCAGTTTTAAATTAA CATGAATTTGTTGTACTTTATGGGATTCGACATCCTGTCTGCGTTATGTA ATTATAGCCAATATGAATGATATTTAAACTATTATTAATGATTACGTATT ACTGTATCATACTTATGAAACGAAAATTCAATAGACATTTAAGGGAGAGT CCTTTGCCCTCCACTATCCACGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7816-RF | 1908 | CG7816-RF | 44..1866 | 2..1824 | 9115 | 100 | Plus |
CG7816.b | 1817 | CG7816.b | 1..1817 | 2..1824 | 9000 | 99.6 | Plus |
CG7816.c | 1755 | CG7816.c | 297..1755 | 366..1824 | 7295 | 100 | Plus |
CG7816.c | 1755 | CG7816.c | 44..296 | 2..254 | 1265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25686181..25686620 | 1822..1386 | 2120 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 25686896..25687312 | 1230..814 | 2025 | 99 | Minus |
chr3R | 27901430 | chr3R | 25691003..25691366 | 365..2 | 1805 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 25687540..25687883 | 708..365 | 1690 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 25686678..25686833 | 1386..1231 | 780 | 100 | Minus |
chr3R | 27901430 | chr3R | 25687372..25687479 | 816..709 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29863699..29864137 | 1824..1386 | 2195 | 100 | Minus |
3R | 32079331 | 3R | 29864413..29864829 | 1230..814 | 2085 | 100 | Minus |
3R | 32079331 | 3R | 29868533..29868896 | 365..2 | 1820 | 100 | Minus |
3R | 32079331 | 3R | 29865057..29865400 | 708..365 | 1720 | 100 | Minus |
3R | 32079331 | 3R | 29864195..29864350 | 1386..1231 | 780 | 100 | Minus |
3R | 32079331 | 3R | 29864889..29864996 | 816..709 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29604530..29604968 | 1824..1386 | 2195 | 100 | Minus |
3R | 31820162 | 3R | 29605244..29605660 | 1230..814 | 2085 | 100 | Minus |
3R | 31820162 | 3R | 29609364..29609727 | 365..2 | 1820 | 100 | Minus |
3R | 31820162 | 3R | 29605888..29606231 | 708..365 | 1720 | 100 | Minus |
3R | 31820162 | 3R | 29605026..29605181 | 1386..1231 | 780 | 100 | Minus |
3R | 31820162 | 3R | 29605720..29605827 | 816..709 | 540 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25686181..25686619 | 1387..1822 | 99 | <- | Minus |
chr3R | 25686678..25686833 | 1231..1386 | 100 | <- | Minus |
chr3R | 25686896..25687309 | 817..1230 | 99 | <- | Minus |
chr3R | 25687372..25687479 | 709..816 | 100 | <- | Minus |
chr3R | 25687540..25687882 | 366..708 | 99 | <- | Minus |
chr3R | 25691003..25691366 | 1..365 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 1..1068 | 498..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 1..1068 | 498..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RH | 1..1068 | 498..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 1..1068 | 498..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Zip99C-RH | 1..1068 | 498..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RF | 1..1821 | 2..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RF | 1..1821 | 2..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RF | 1..1820 | 3..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RF | 1..1821 | 2..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Zip99C-RF | 1..1820 | 3..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29864195..29864350 | 1231..1386 | 100 | <- | Minus |
3R | 29863701..29864136 | 1387..1822 | 100 | <- | Minus |
3R | 29868533..29868896 | 1..365 | 99 | Minus | |
3R | 29864413..29864826 | 817..1230 | 100 | <- | Minus |
3R | 29864889..29864996 | 709..816 | 100 | <- | Minus |
3R | 29865057..29865399 | 366..708 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29864195..29864350 | 1231..1386 | 100 | <- | Minus |
3R | 29863701..29864136 | 1387..1822 | 100 | <- | Minus |
3R | 29868533..29868896 | 1..365 | 99 | Minus | |
3R | 29864413..29864826 | 817..1230 | 100 | <- | Minus |
3R | 29864889..29864996 | 709..816 | 100 | <- | Minus |
3R | 29865057..29865399 | 366..708 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29864195..29864350 | 1231..1386 | 100 | <- | Minus |
3R | 29863701..29864136 | 1387..1822 | 100 | <- | Minus |
3R | 29868533..29868896 | 1..365 | 99 | Minus | |
3R | 29864413..29864826 | 817..1230 | 100 | <- | Minus |
3R | 29864889..29864996 | 709..816 | 100 | <- | Minus |
3R | 29865057..29865399 | 366..708 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25689423..25689858 | 1387..1822 | 100 | <- | Minus |
arm_3R | 25689917..25690072 | 1231..1386 | 100 | <- | Minus |
arm_3R | 25690135..25690548 | 817..1230 | 100 | <- | Minus |
arm_3R | 25690611..25690718 | 709..816 | 100 | <- | Minus |
arm_3R | 25690779..25691121 | 366..708 | 100 | <- | Minus |
arm_3R | 25694255..25694618 | 1..365 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29605720..29605827 | 709..816 | 100 | <- | Minus |
3R | 29604532..29604967 | 1387..1822 | 100 | <- | Minus |
3R | 29605026..29605181 | 1231..1386 | 100 | <- | Minus |
3R | 29605244..29605657 | 817..1230 | 100 | <- | Minus |
3R | 29605888..29606230 | 366..708 | 100 | <- | Minus |
3R | 29609364..29609727 | 1..365 | 99 | Minus |
Translation from 497 to 1564
> RH13513.hyp MTTNSSFFDEHIAMIYSNLMDQYMPEYFKSFEYTPWVFSLLGSVVIGLSG IFPLIIIPTEEKMAKEGYKDPADSKLLRVLLSFAVGGLLGDVFLHLLPEA WEGDNQDPSSHPSLRSGLWVLSGILIFTIVEKIFSGYASADEENPQPKCV EIANCLLRRHGGQLPEGETSESCGGACDIEDVGKVCFLREQEQKSKERKE QPKKVAGYLNLLANSIDNFTHGLAVAGSFLVSFRHGILATFAILLHEIPH EVGDFAILLRSGFSRWDAARAQLLTAGAGLLGALVAIGGSGVTSAMEART SWIMPFTAGGFLHIALVTVLPDLLKEEERKESIKQLLALVFGIALMAVMT MLFEH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Zip99C-PJ | 355 | CG7816-PJ | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PI | 355 | CG7816-PI | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PH | 355 | CG7816-PH | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PC | 355 | CG7816-PC | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PE | 355 | CG7816-PE | 1..355 | 1..355 | 1825 | 100 | Plus |
Translation from 497 to 1564
> RH13513.pep MTTNSSFFDEHIAMIYSNLMDQYMPEYFKSFEYTPWVFSLLGSVVIGLSG IFPLIIIPTEEKMAKEGYKDPADSKLLRVLLSFAVGGLLGDVFLHLLPEA WEGDNQDPSSHPSLRSGLWVLSGILIFTIVEKIFSGYASADEENPQPKCV EIANCLLRRHGGQLPEGETSESCGGACDIEDVGKVCFLREQEQKSKERKE QPKKVAGYLNLLANSIDNFTHGLAVAGSFLVSFRHGILATFAILLHEIPH EVGDFAILLRSGFSRWDAARAQLLTAGAGLLGALVAIGGSGVTSAMEART SWIMPFTAGGFLHIALVTVLPDLLKEEERKESIKQLLALVFGIALMAVMT MLFEH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16226-PA | 357 | GF16226-PA | 1..357 | 1..355 | 1790 | 94.4 | Plus |
Dana\GF14692-PA | 441 | GF14692-PA | 120..437 | 34..349 | 437 | 33.9 | Plus |
Dana\GF23796-PA | 582 | GF23796-PA | 244..536 | 33..323 | 225 | 25 | Plus |
Dana\GF24332-PA | 715 | GF24332-PA | 549..686 | 211..351 | 185 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11991-PA | 355 | GG11991-PA | 1..355 | 1..355 | 1834 | 97.7 | Plus |
Dere\GG21151-PA | 447 | GG21151-PA | 128..443 | 34..349 | 398 | 34.6 | Plus |
Dere\GG15710-PA | 571 | GG15710-PA | 242..549 | 36..345 | 239 | 23.8 | Plus |
Dere\GG14322-PA | 699 | GG14322-PA | 544..687 | 207..354 | 183 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13993-PA | 355 | GH13993-PA | 1..355 | 1..355 | 1622 | 84.2 | Plus |
Dgri\GH10891-PA | 376 | GH10891-PA | 63..372 | 36..349 | 409 | 34.9 | Plus |
Dgri\GH16665-PA | 581 | GH16665-PA | 410..569 | 192..351 | 194 | 28.9 | Plus |
Dgri\GH22517-PA | 570 | GH22517-PA | 409..550 | 207..351 | 187 | 28.8 | Plus |
Dgri\GH15311-PA | 714 | GH15311-PA | 553..696 | 207..354 | 186 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Zip99C-PJ | 355 | CG7816-PJ | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PI | 355 | CG7816-PI | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PH | 355 | CG7816-PH | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PC | 355 | CG7816-PC | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PE | 355 | CG7816-PE | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PA | 355 | CG7816-PA | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PD | 355 | CG7816-PD | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PF | 355 | CG7816-PF | 1..355 | 1..355 | 1825 | 100 | Plus |
Zip99C-PG | 355 | CG7816-PG | 1..355 | 1..355 | 1825 | 100 | Plus |
Catsup-PA | 449 | CG10449-PA | 130..445 | 34..349 | 461 | 34.9 | Plus |
Zip71B-PC | 572 | CG10006-PC | 243..550 | 36..345 | 262 | 23.9 | Plus |
Zip71B-PB | 572 | CG10006-PB | 243..550 | 36..345 | 262 | 23.9 | Plus |
foi-PD | 706 | CG6817-PD | 545..685 | 208..351 | 196 | 28.6 | Plus |
foi-PC | 706 | CG6817-PC | 545..685 | 208..351 | 196 | 28.6 | Plus |
foi-PB | 706 | CG6817-PB | 545..685 | 208..351 | 196 | 28.6 | Plus |
foi-PA | 706 | CG6817-PA | 545..685 | 208..351 | 196 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22338-PA | 354 | GI22338-PA | 1..354 | 1..355 | 1659 | 87.9 | Plus |
Dmoj\GI13064-PA | 437 | GI13064-PA | 109..433 | 36..349 | 389 | 35 | Plus |
Dmoj\GI11351-PA | 579 | GI11351-PA | 406..567 | 190..351 | 201 | 29.8 | Plus |
Dmoj\GI12906-PA | 702 | GI12906-PA | 538..676 | 207..353 | 192 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13475-PA | 360 | GL13475-PA | 1..360 | 1..355 | 1727 | 90.3 | Plus |
Dper\GL18911-PA | 448 | GL18911-PA | 120..447 | 34..352 | 401 | 34.8 | Plus |
Dper\GL24708-PA | 575 | GL24708-PA | 250..566 | 36..355 | 238 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20606-PB | 360 | GA20606-PB | 1..360 | 1..355 | 1727 | 90.3 | Plus |
Dpse\GA20606-PA | 360 | GA20606-PA | 1..360 | 1..355 | 1727 | 90.3 | Plus |
Dpse\GA10324-PA | 448 | GA10324-PA | 120..447 | 34..352 | 407 | 35.1 | Plus |
Dpse\GA10004-PA | 575 | GA10004-PA | 250..566 | 36..355 | 238 | 24 | Plus |
Dpse\GA23845-PA | 718 | GA23845-PA | 554..697 | 207..354 | 190 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12209-PA | 355 | GM12209-PA | 1..355 | 1..355 | 1855 | 98.9 | Plus |
Dsec\GM17316-PA | 434 | GM17316-PA | 115..430 | 34..349 | 378 | 35.1 | Plus |
Dsec\GM25497-PA | 572 | GM25497-PA | 243..550 | 36..345 | 231 | 23.4 | Plus |
Dsec\GM25063-PA | 705 | GM25063-PA | 543..684 | 207..351 | 187 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17600-PA | 355 | GD17600-PA | 1..355 | 1..355 | 1855 | 98.9 | Plus |
Dsim\Catsup-PA | 431 | GD24175-PA | 126..427 | 34..349 | 378 | 33.7 | Plus |
Dsim\GD14517-PA | 572 | GD14517-PA | 243..550 | 36..345 | 236 | 23.4 | Plus |
Dsim\GD14101-PA | 706 | GD14101-PA | 548..687 | 211..354 | 185 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10525-PA | 355 | GJ10525-PA | 1..355 | 1..355 | 1719 | 89.6 | Plus |
Dvir\GJ11603-PA | 435 | GJ11603-PA | 117..431 | 36..349 | 386 | 35.3 | Plus |
Dvir\GJ11605-PA | 571 | GJ11605-PA | 234..559 | 33..355 | 228 | 24.8 | Plus |
Dvir\GJ13046-PA | 697 | GJ13046-PA | 533..671 | 207..353 | 190 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13376-PA | 355 | GK13376-PA | 1..355 | 1..355 | 1743 | 92.1 | Plus |
Dwil\GK24165-PA | 441 | GK24165-PA | 100..437 | 25..349 | 404 | 35.1 | Plus |
Dwil\GK20356-PA | 736 | GK20356-PA | 567..702 | 208..346 | 189 | 30 | Plus |
Dwil\GK10549-PA | 441 | GK10549-PA | 208..427 | 33..264 | 183 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10416-PA | 355 | GE10416-PA | 1..355 | 1..355 | 1850 | 98.3 | Plus |
Dyak\GE13224-PA | 453 | GE13224-PA | 132..449 | 34..349 | 380 | 33.4 | Plus |
Dyak\GE22041-PA | 571 | GE22041-PA | 395..549 | 191..345 | 196 | 31 | Plus |
Dyak\GE20750-PA | 708 | GE20750-PA | 550..689 | 211..354 | 181 | 29.9 | Plus |