BDGP Sequence Production Resources |
Search the DGRC for RH13652
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 136 |
Well: | 52 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG6044-RA |
Protein status: | RH13652.pep: gold |
Preliminary Size: | 858 |
Sequenced Size: | 1482 |
Gene | Date | Evidence |
---|---|---|
CG6044 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6044 | 2002-04-19 | Blastp of sequenced clone |
CG6044 | 2008-04-29 | Release 5.5 accounting |
CG6044 | 2008-08-15 | Release 5.9 accounting |
CG6044 | 2008-12-18 | 5.12 accounting |
1482 bp (1482 high quality bases) assembled on 2002-04-19
GenBank Submission: AY113569
> RH13652.complete GAGTCCTCGGCGAACAACAGAAACGATAACGACAGCCCACGCAAAAGAGC TCAGAACTCACAAAAAACCCTGGTGACAAAACAAAGTTCAGTGTCTCGGC CGCCGTTTATCCTCAAAGGTGGCAAAAAGCAAACTGGTTTGGAAACCACA TAAAAAAAAATTTGAAAAAAGTGCAAAGGATTTCGAGAAGTGGATATTGG CATACCCTCAATCATAAACAAGCAACTGAAATGAGGCATCTCTGGCTGCT CCTTCTTATCGCCTGTGGATCTGTCCAGTTCCCAGGTGTGCTGACCTTGC CGGAGGCACTCCCAGCCAAATCTTCATCGGCCGCTGGAGGCGGAAACGGA GGTGGAGCCGGGGGAGCCGTCACTGCCCCGTCAGCAGGAGACACCAGCAA GGACTACGACTACGAGGAGGACCAGCAGCGGGCTCCGGGAAACCTGGCCA AGTCGACCGCTGATCCCAAAGTTCCAGAGCCATACTTCGAGCACAGCGAT GTGGATATCTATGTGCCGCAGAACGCGACCAGCGCCAAGTTGGAGTGCCC AGTTAAAAATTATAATGCTGCACACCACGTCGTTCTCTGGTACAAGGAGA AGGTACAGGTATCCAGCGGAATGAATATATTCAACCACATCTATGCCCTG GACGAGCAGTTCTCCCTGACCGTTCCCCTGGCATCCAATGCCACCGAGGA GCGCTACGAGTGCGAGGTACTGCCGAACAAAGTGCGACACACGGCTACCA TTCGCTTTGGCCCGGAGCCAAGCACCCCGGCTCCATCTCTGCTTCCGGCA CCGGCGGGCACATCTGCTTCCTCCGTCAACGATTCGGCGGCTCACGGACG GGACATTAGCCTCTGGCTGCTGGGCCTCTTTCTGGCCCCGCTCCAGTTGG CAGTGACCTTTCGGTTCTGAAGCAGTTTGAGTTCAAGACCGCTCCATAAA TCTGCACCACCGGCATTACGTGATTACGTTTGGAGATGTGCACCGCAACA GATGAGCTTGACATTGGGATGTAGCCCTCGGATAACGTCGATGGCCTGGC AAATTTGCGATAGTTGTTTGCTTTGTTACTGTATTATATGGGAAAACGAT TTTCCAGGGAAGCGAACTTCCCAGAGCTATAGGTTATTTAAATTTTACAC TTCCAACTCAGCTTCCTCTACTTCCAATATCGATGTTTTAGACCTCATTT GAAGTAAAATTGTTTGTAAGCCATTACTTGAACTTAGATACGCTACCTAT AGGATCGAATTAGCCTAGTGTGATTGCTTTAGTATTGCGCTTAGTCGAGA GATTAGTACATAATTGATTTTAACTTAGCGGAACAAAATGCGATACCAAG TGGCTTACCGAATCATTGTGAAGGAAACTATATATATGTGAACAGATTAT GAGTACATAAAAACAATGTATGCAATTTTGTCGAATGTAAAACTGAAATA AACTAGAGCTGCTAAAGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6044.b | 1656 | CG6044.b | 5..1471 | 2..1468 | 7335 | 100 | Plus |
CG6044-RA | 1488 | CG6044-RA | 5..1471 | 2..1468 | 7335 | 100 | Plus |
CG6044-RE | 1512 | CG6044-RE | 309..1495 | 282..1468 | 5935 | 100 | Plus |
CG6044-RE | 1512 | CG6044-RE | 3..286 | 2..285 | 1420 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18293969..18294869 | 567..1467 | 4460 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 18293556..18293840 | 283..567 | 1410 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 18290689..18290973 | 2..287 | 1380 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22407454..22408355 | 567..1468 | 4510 | 100 | Plus |
2R | 25286936 | 2R | 22404177..22404462 | 2..287 | 1430 | 100 | Plus |
2R | 25286936 | 2R | 22407040..22407325 | 282..567 | 1430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22408653..22409554 | 567..1468 | 4510 | 100 | Plus |
2R | 25260384 | 2R | 22408239..22408524 | 282..567 | 1430 | 100 | Plus |
2R | 25260384 | 2R | 22405376..22405661 | 2..287 | 1430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18290687..18290971 | 1..285 | 99 | -> | Plus |
chr2R | 18293559..18293840 | 286..567 | 99 | -> | Plus |
chr2R | 18293970..18294869 | 568..1467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 1..690 | 231..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 1..690 | 231..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 1..690 | 231..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 1..690 | 231..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 1..690 | 231..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 3..1470 | 1..1467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 3..1470 | 1..1467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 1..1466 | 2..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 3..1470 | 1..1467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6044-RA | 1..1466 | 2..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22404175..22404460 | 1..285 | 99 | -> | Plus |
2R | 22407044..22407325 | 286..567 | 100 | -> | Plus |
2R | 22407455..22408354 | 568..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22404175..22404460 | 1..285 | 99 | -> | Plus |
2R | 22407044..22407325 | 286..567 | 100 | -> | Plus |
2R | 22407455..22408354 | 568..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22404175..22404460 | 1..285 | 99 | -> | Plus |
2R | 22407044..22407325 | 286..567 | 100 | -> | Plus |
2R | 22407455..22408354 | 568..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18291680..18291965 | 1..285 | 99 | -> | Plus |
arm_2R | 18294549..18294830 | 286..567 | 100 | -> | Plus |
arm_2R | 18294960..18295859 | 568..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22405374..22405659 | 1..285 | 99 | -> | Plus |
2R | 22408243..22408524 | 286..567 | 100 | -> | Plus |
2R | 22408654..22409553 | 568..1467 | 100 | Plus |
Translation from 230 to 919
> RH13652.pep MRHLWLLLLIACGSVQFPGVLTLPEALPAKSSSAAGGGNGGGAGGAVTAP SAGDTSKDYDYEEDQQRAPGNLAKSTADPKVPEPYFEHSDVDIYVPQNAT SAKLECPVKNYNAAHHVVLWYKEKVQVSSGMNIFNHIYALDEQFSLTVPL ASNATEERYECEVLPNKVRHTATIRFGPEPSTPAPSLLPAPAGTSASSVN DSAAHGRDISLWLLGLFLAPLQLAVTFRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11888-PA | 241 | GF11888-PA | 1..236 | 1..224 | 609 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22186-PA | 228 | GG22186-PA | 1..228 | 1..229 | 1018 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21363-PA | 547 | GH21363-PA | 440..512 | 108..181 | 162 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6044-PG | 229 | CG6044-PG | 1..229 | 1..229 | 1201 | 100 | Plus |
CG6044-PA | 229 | CG6044-PA | 1..229 | 1..229 | 1201 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20558-PA | 169 | GI20558-PA | 6..127 | 54..177 | 269 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17541-PA | 222 | GL17541-PA | 1..209 | 1..213 | 522 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19317-PA | 222 | GA19317-PA | 1..209 | 1..213 | 522 | 52.8 | Plus |
Dpse\GA19317-PC | 209 | GA19317-PC | 7..196 | 20..213 | 439 | 50.8 | Plus |
Dpse\GA19317-PB | 126 | GA19317-PB | 16..113 | 113..213 | 222 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15907-PA | 228 | GM15907-PA | 1..228 | 1..229 | 1076 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11665-PA | 228 | GD11665-PA | 1..228 | 1..229 | 1079 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22411-PA | 171 | GJ22411-PA | 4..132 | 49..177 | 323 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14180-PA | 237 | GE14180-PA | 1..237 | 1..229 | 997 | 89.1 | Plus |
Translation from 230 to 919
> RH13652.hyp MRHLWLLLLIACGSVQFPGVLTLPEALPAKSSSAAGGGNGGGAGGAVTAP SAGDTSKDYDYEEDQQRAPGNLAKSTADPKVPEPYFEHSDVDIYVPQNAT SAKLECPVKNYNAAHHVVLWYKEKVQVSSGMNIFNHIYALDEQFSLTVPL ASNATEERYECEVLPNKVRHTATIRFGPEPSTPAPSLLPAPAGTSASSVN DSAAHGRDISLWLLGLFLAPLQLAVTFRF*