BDGP Sequence Production Resources |
Search the DGRC for RH13862
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 138 |
Well: | 62 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Uev1A-RB |
Protein status: | RH13862.pep: gold |
Preliminary Size: | 888 |
Sequenced Size: | 1120 |
Gene | Date | Evidence |
---|---|---|
CG10640 | 2002-10-18 | Blastp of sequenced clone |
Uev1A | 2008-04-29 | Release 5.5 accounting |
Uev1A | 2008-08-15 | Release 5.9 accounting |
Uev1A | 2008-12-18 | 5.12 accounting |
1120 bp (1120 high quality bases) assembled on 2002-10-18
GenBank Submission: BT001776
> RH13862.complete GGCAGTGGTGCCACGGAATTTCCGCTTACTGGAGGAGCTGGATCAGGGCC AGAAGGGCGTGGGCGATGGCACCATATCGTGGGGCCTGGAGAACGACGAC GACATGACGCTCACCTACTGGATCGGCATGATCATCGGTCCGCCTAGAAC ACCATTCGAGAATCGAATGTATTCACTAAAGATCGAGTGCGGCGAACGCT ATCCGGATGAGCCACCAACGCTCCGGTTTATAACTAAAGTAAACATTAAC TGCATTAATCAGAACAATGGCGTGGTTGATCATAGATCAGTTCAGATGTT GGCCAGATGGAGTCGCGAGTACAATATAAAAACGATGCTGCAGGAAATCC GTAGGATTATGACCATGAAAGAGAACCTGAAGCTGGCACAGCCGCCAGAA GGTAGCTGTTTTTAGTCGACAACATCCGTTAGCAACACCAGCAGCAGCTG CAACAGCATCGAATGCAACGCGAGCGGGAGCAGCATCCACACCCAGTAAG AGCCGGAAAACGAACCACCATCATCAGTCCAAAAGTCCAAGACCAAGGTG GCCACACGTGCGTGGAATTAAAAAGAGATTGTGTGGCGGCTGCTCCGCCG AGTTGCCATCGGTGGCAGCGTATGCTTATTAATGAACGTAATAAAGATCG AGTGCGGTTATTGTGGCAAGAACAACAACCAAATGCAAGCTATATACTAT AAGTAAAGGGAACAGCAGCGAAAAATGCGATAGGAGCGTCACTATGAAGA GGTCGTCGTCGTCCCTTCCGTCATGAACTATGTCATCGTGTTTGGTTACC TTACTCTTCTTACTACTTCAACTTCAGTCCCCAAACAAAACGAAACGAAA ATATGAGAACTTCTTTTGAATAAGAAATAAAACAGCAGCAAAAGAAACAA GTTAAATGCCTGAATGTTTCAGATTCAAAACTTCAAATCGAAAATTCGTA AACTAATCGAACAGAAAAGTAATGCATAACAATGATAACGATTAATCAAG ATCACAGCGTGAGATCCGAGCGTAATTATTGTTTTTTTTTGCCTAAACTA AAAATTTATTAATTATATACATAAAGCAAAATATATATTAATTTAAATAA AACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 5355763..5356592 | 1104..274 | 4060 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 5357516..5357662 | 148..2 | 735 | 100 | Minus |
chr3L | 24539361 | chr3L | 5356658..5356785 | 276..149 | 640 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6842..6954 | 417..529 | 123 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1535..1578 | 416..460 | 114 | 75.6 | Plus |
Ddip\Bari1 | 1677 | Ddip\Bari1 DDBARI1 1676bp Derived from Y13852. | 1334..1592 | 1093..842 | 114 | 55.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1615 | 442..536 | 113 | 63 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5355816..5356591 | 275..1050 | 99 | <- | Minus |
chr3L | 5356660..5356785 | 149..274 | 100 | <- | Minus |
chr3L | 5357516..5357662 | 1..148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RA | 22..438 | 1..415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RA | 22..438 | 1..415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RA | 22..438 | 1..415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RA | 22..438 | 1..415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RA | 22..438 | 1..415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RB | 1..1103 | 2..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RB | 1..1103 | 2..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RA | 91..1196 | 1..1104 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RB | 1..1103 | 2..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uev1A-RA | 91..1196 | 1..1104 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5364084..5364209 | 149..274 | 100 | <- | Minus |
3L | 5364943..5365089 | 1..148 | 99 | Minus | |
3L | 5363186..5364015 | 275..1104 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5364084..5364209 | 149..274 | 100 | <- | Minus |
3L | 5364943..5365089 | 1..148 | 99 | Minus | |
3L | 5363186..5364015 | 275..1104 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5364084..5364209 | 149..274 | 100 | <- | Minus |
3L | 5364943..5365089 | 1..148 | 99 | Minus | |
3L | 5363186..5364015 | 275..1104 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5356286..5357115 | 275..1104 | 100 | <- | Minus |
arm_3L | 5357184..5357309 | 149..274 | 100 | <- | Minus |
arm_3L | 5358043..5358189 | 1..148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5356286..5357115 | 275..1104 | 100 | <- | Minus |
3L | 5357184..5357309 | 149..274 | 100 | <- | Minus |
3L | 5358043..5358189 | 1..148 | 99 | Minus |
Translation from 0 to 414
> RH13862.hyp AVVPRNFRLLEELDQGQKGVGDGTISWGLENDDDMTLTYWIGMIIGPPRT PFENRMYSLKIECGERYPDEPPTLRFITKVNINCINQNNGVVDHRSVQML ARWSREYNIKTMLQEIRRIMTMKENLKLAQPPEGSCF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uev1A-PC | 145 | CG10640-PC | 10..145 | 2..137 | 734 | 100 | Plus |
Uev1A-PA | 145 | CG10640-PA | 10..145 | 2..137 | 734 | 100 | Plus |
Uev1A-PB | 103 | CG10640-PB | 1..103 | 35..137 | 557 | 100 | Plus |
Ubc6-PC | 151 | CG2013-PC | 30..114 | 34..121 | 140 | 33.7 | Plus |
Ubc6-PA | 151 | CG2013-PA | 30..114 | 34..121 | 140 | 33.7 | Plus |
Translation from 103 to 414
> RH13862.pep MTLTYWIGMIIGPPRTPFENRMYSLKIECGERYPDEPPTLRFITKVNINC INQNNGVVDHRSVQMLARWSREYNIKTMLQEIRRIMTMKENLKLAQPPEG SCF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10466-PA | 145 | GF10466-PA | 43..145 | 1..103 | 539 | 97.1 | Plus |
Dana\GF16080-PA | 151 | GF16080-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14135-PA | 145 | GG14135-PA | 43..145 | 1..103 | 554 | 100 | Plus |
Dere\GG11277-PA | 151 | GG11277-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15269-PA | 145 | GH15269-PA | 43..145 | 1..103 | 538 | 97.1 | Plus |
Dgri\GH15302-PA | 151 | GH15302-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uev1A-PB | 103 | CG10640-PB | 1..103 | 1..103 | 557 | 100 | Plus |
Uev1A-PC | 145 | CG10640-PC | 43..145 | 1..103 | 557 | 100 | Plus |
Uev1A-PA | 145 | CG10640-PA | 43..145 | 1..103 | 557 | 100 | Plus |
Ubc6-PC | 151 | CG2013-PC | 36..114 | 6..87 | 136 | 34.9 | Plus |
Ubc6-PA | 151 | CG2013-PA | 36..114 | 6..87 | 136 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11977-PA | 145 | GI11977-PA | 43..145 | 1..103 | 535 | 96.1 | Plus |
Dmoj\GI22506-PA | 151 | GI22506-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12148-PA | 145 | GL12148-PA | 43..145 | 1..103 | 529 | 95.1 | Plus |
Dper\GL24789-PA | 85 | GL24789-PA | 43..82 | 1..40 | 211 | 95 | Plus |
Dper\GL22213-PA | 151 | GL22213-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10461-PA | 145 | GA10461-PA | 43..145 | 1..103 | 529 | 95.1 | Plus |
Dpse\GA15184-PB | 118 | GA15184-PB | 3..81 | 6..87 | 145 | 34.9 | Plus |
Dpse\GA15184-PA | 151 | GA15184-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13922-PA | 145 | GM13922-PA | 43..145 | 1..103 | 554 | 100 | Plus |
Dsec\GM10669-PA | 151 | GM10669-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13202-PA | 145 | GD13202-PA | 43..145 | 1..103 | 554 | 100 | Plus |
Dsim\GD19645-PA | 151 | GD19645-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12202-PA | 145 | GJ12202-PA | 43..145 | 1..103 | 535 | 96.1 | Plus |
Dvir\GJ10109-PA | 151 | GJ10109-PA | 36..114 | 6..87 | 144 | 34.9 | Plus |