BDGP Sequence Production Resources |
Search the DGRC for RH14395
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 143 |
Well: | 95 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15529-RA |
Protein status: | RH14395.pep: gold |
Preliminary Size: | 591 |
Sequenced Size: | 980 |
Gene | Date | Evidence |
---|---|---|
CG15529 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15529 | 2002-02-26 | Blastp of sequenced clone |
CG15529 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15529 | 2008-04-29 | Release 5.5 accounting |
CG15529 | 2008-08-15 | Release 5.9 accounting |
CG15529 | 2008-12-18 | 5.12 accounting |
980 bp (980 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089656
> RH14395.complete GAGTCTTCAGCGCAGCTCGATAGCGAAAGATGTTTGCCGGGAGCGGCGGT CTCAGTGCCACCGATCCATCTAATCCAAGGTCGCGGGAATAGGACTGCTC TACTGTGTCGTTTGGCGCCATGTGCTGCTGGTGTGCACGTGTCTACTGGA CGGTTCTGCACAATCTCCTGGCTCGCATGATGGACAGCCTGATGGAAGTC AGATCGCCCACCTTCTGTAGCTGCTGCTTCGGTTATCAGCGGCAGGCCAG TCAGGAAGGTGACGTCGCAGAACGGGTTTCCAGCACCGACGACGATCCAC AACAGCAGCCCCGTGAGGATTACGTCATTGTGGACGATGCCGATGTCAAC TACGCGGAGATTGAGGAGAGGCATGTGGAAAAGGAGCAGTACTACTTCAC AGTGGATCGTCCTACGGCGGAGCGAATGCTCCATGGACGAGAGGACGGGT CCTGCCTGGTTCGACCTTTCAAGGCAGCCGACCAGTGGATCCGTTACATA GTGAGCATCTGGGCGGCGGATCAGTACTATCACCTGTTCATAAGGCAAGT GGATAGGAGACAACGCTATGCCATTGGTCAGAAGAAGTCTCAGGAGCGCT GCTTCGGATCCCCCTCGGAAATCGTGGAGTTCTACACGGAGCATCCACTT CTCTGCACCAACAAGGTCCGGAGCCAGTGCGTCCAACTCCGTCCCATCAG TTACGCTTAGCTAGGGGTCAAATCTTTATTGCATAAGAGAGGGCAAGTAT GTACAAATGGGGTTAGCTTAAGACGATGCTCAGGTGGCCACCACCGCCTT GAAGGCGCACTGGTTGTTCTGCATCAGGGCGGGCCAGAGGAAGGCTTTTA TCAGATCCGATCGCCGGTCCGCCTGGGGATGCCGCTCGTGTTTCTCGGGC CTCAGGAAACCTGCATGGGATTTACGTAGGTGTAAGATTGTTAAACGATT AAAGAGTAGCTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 2562..2606 | 252..296 | 126 | 75.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25974498..25974830 | 1..333 | 99 | -> | Plus |
chr3R | 25975079..25975707 | 334..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 1..591 | 120..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 1..591 | 120..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 1..591 | 120..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 1..591 | 120..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 1..591 | 120..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 2..962 | 2..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 2..962 | 2..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 4..965 | 1..962 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 2..962 | 2..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15529-RA | 4..965 | 1..962 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30152062..30152394 | 1..333 | 99 | -> | Plus |
3R | 30152643..30153271 | 334..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30152062..30152394 | 1..333 | 99 | -> | Plus |
3R | 30152643..30153271 | 334..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30152062..30152394 | 1..333 | 99 | -> | Plus |
3R | 30152643..30153271 | 334..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25977784..25978116 | 1..333 | 99 | -> | Plus |
arm_3R | 25978365..25978993 | 334..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29892893..29893225 | 1..333 | 99 | -> | Plus |
3R | 29893474..29894102 | 334..962 | 100 | Plus |
Translation from 119 to 709
> RH14395.pep MCCWCARVYWTVLHNLLARMMDSLMEVRSPTFCSCCFGYQRQASQEGDVA ERVSSTDDDPQQQPREDYVIVDDADVNYAEIEERHVEKEQYYFTVDRPTA ERMLHGREDGSCLVRPFKAADQWIRYIVSIWAADQYYHLFIRQVDRRQRY AIGQKKSQERCFGSPSEIVEFYTEHPLLCTNKVRSQCVQLRPISYA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18824-PA | 207 | GF18824-PA | 1..207 | 1..196 | 807 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11734-PA | 196 | GG11734-PA | 1..196 | 1..196 | 986 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19179-PA | 215 | GH19179-PA | 2..215 | 3..196 | 554 | 57.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15529-PB | 196 | CG15529-PB | 1..196 | 1..196 | 1068 | 100 | Plus |
CG15529-PA | 196 | CG15529-PA | 1..196 | 1..196 | 1068 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24215-PA | 209 | GI24215-PA | 2..209 | 3..196 | 634 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13445-PA | 197 | GL13445-PA | 1..197 | 1..196 | 702 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13786-PA | 199 | GA13786-PA | 1..199 | 1..196 | 698 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12865-PA | 196 | GM12865-PA | 1..196 | 1..196 | 1043 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21505-PA | 196 | GD21505-PA | 1..196 | 1..196 | 1043 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10786-PA | 210 | GJ10786-PA | 2..210 | 3..196 | 576 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14117-PA | 153 | GK14117-PA | 17..153 | 61..196 | 498 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10860-PA | 196 | GE10860-PA | 1..196 | 1..196 | 976 | 93.4 | Plus |
Translation from 119 to 709
> RH14395.hyp MCCWCARVYWTVLHNLLARMMDSLMEVRSPTFCSCCFGYQRQASQEGDVA ERVSSTDDDPQQQPREDYVIVDDADVNYAEIEERHVEKEQYYFTVDRPTA ERMLHGREDGSCLVRPFKAADQWIRYIVSIWAADQYYHLFIRQVDRRQRY AIGQKKSQERCFGSPSEIVEFYTEHPLLCTNKVRSQCVQLRPISYA*