BDGP Sequence Production Resources |
Search the DGRC for RH14671
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 146 |
Well: | 71 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG33178-RA |
Protein status: | RH14671.pep: gold |
Preliminary Size: | 747 |
Sequenced Size: | 600 |
Gene | Date | Evidence |
---|---|---|
CG33178 | 2001-12-17 | Blastp of sequenced clone |
CG5579 | 2002-01-01 | Sim4 clustering to Release 2 |
CG33178 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33178 | 2008-04-29 | Release 5.5 accounting |
CG33178 | 2008-08-15 | Release 5.9 accounting |
CG33178 | 2008-12-18 | 5.12 accounting |
600 bp (600 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071694
> RH14671.complete GATTTGTCGAAGTCGGCTCAAAGCGAACGCACACACATTCCGCATCCGCC ATGTCGGCCGCAGCTAGTAATTCCAGCAAGATGATGACATCGCCCGGCGA TATGTTTACCCTGGAGAATCCTGTCTTTTGCTGCTATCTTTTTTGGTCCA CAGTCCTGGTGGTGAAGATGCTGCTCATGTCGCTGCTAACGGCCGTTCAG CGTTTCCGGTATAAGATCTTTCCCAACCAGGAGGATCTGTTCTTCAAGAA TCTTGAAGTGCAATTCGATGATCCGCATGTGGAGCGGGTCAGAAGGGCCC ATCGCAATGACATGGAGAACATTCTGCCGTATTTTATCATGTCCTTGATT TATATCAGTACCAATCCGAATGCCGATGTGGCCTGCATACTGTTCCGAGT GGCCTCCGTGGCCAGGATCATACACACTCTGGTTTACGCCGTTTATCCGG TGCCGCAGCCATCGAGGATTCTAGCCTTCGCCACCATGCTACTGATCACC TTCTACATGGCCGCCGTGGTCGCCCTGCGTACCCTAAGCTTTATATGAAT AAATTCAAGTCCCTTTCGGCTTAACCCTCAAAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 14973652..14973940 | 294..582 | 1445 | 100 | Plus |
chrX | 22417052 | chrX | 14972994..14973207 | 2..215 | 1070 | 100 | Plus |
chrX | 22417052 | chrX | 14973421..14973503 | 214..296 | 415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14972993..14973207 | 1..215 | 99 | -> | Plus |
chrX | 14973423..14973502 | 216..295 | 100 | -> | Plus |
chrX | 14973654..14973940 | 296..584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 1..498 | 51..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 1..498 | 51..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 1..498 | 51..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 1..498 | 51..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 1..498 | 51..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 2..582 | 2..584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 2..582 | 2..584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 2..582 | 2..584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 2..582 | 2..584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33178-RA | 2..582 | 2..584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15083488..15083774 | 296..584 | 99 | Plus | |
X | 15082827..15083041 | 1..215 | 99 | -> | Plus |
X | 15083257..15083336 | 216..295 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15083488..15083774 | 296..584 | 99 | Plus | |
X | 15082827..15083041 | 1..215 | 99 | -> | Plus |
X | 15083257..15083336 | 216..295 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15083488..15083774 | 296..584 | 99 | Plus | |
X | 15082827..15083041 | 1..215 | 99 | -> | Plus |
X | 15083257..15083336 | 216..295 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14976860..14977074 | 1..215 | 99 | -> | Plus |
arm_X | 14977290..14977369 | 216..295 | 100 | -> | Plus |
arm_X | 14977521..14977807 | 296..584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15090925..15091139 | 1..215 | 99 | -> | Plus |
X | 15091355..15091434 | 216..295 | 100 | -> | Plus |
X | 15091586..15091872 | 296..584 | 99 | Plus |
Translation from 2 to 547
> RH14671.hyp FVEVGSKRTHTHSASAMSAAASNSSKMMTSPGDMFTLENPVFCCYLFWST VLVVKMLLMSLLTAVQRFRYKIFPNQEDLFFKNLEVQFDDPHVERVRRAH RNDMENILPYFIMSLIYISTNPNADVACILFRVASVARIIHTLVYAVYPV PQPSRILAFATMLLITFYMAAVVALRTLSFI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33178-PC | 165 | CG33178-PC | 1..165 | 17..181 | 840 | 100 | Plus |
CG33178-PA | 165 | CG33178-PA | 1..165 | 17..181 | 840 | 100 | Plus |
CG33178-PB | 177 | CG33178-PB | 1..177 | 17..181 | 817 | 93.2 | Plus |
Mgstl-PA | 152 | CG1742-PA | 1..146 | 28..173 | 446 | 61 | Plus |
CG33177-PA | 167 | CG33177-PA | 19..167 | 34..181 | 405 | 52.3 | Plus |
Translation from 50 to 547
> RH14671.pep MSAAASNSSKMMTSPGDMFTLENPVFCCYLFWSTVLVVKMLLMSLLTAVQ RFRYKIFPNQEDLFFKNLEVQFDDPHVERVRRAHRNDMENILPYFIMSLI YISTNPNADVACILFRVASVARIIHTLVYAVYPVPQPSRILAFATMLLIT FYMAAVVALRTLSFI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21219-PA | 170 | GF21219-PA | 6..170 | 1..165 | 740 | 83.6 | Plus |
Dana\GF21709-PA | 195 | GF21709-PA | 44..186 | 12..154 | 463 | 60.8 | Plus |
Dana\GF21218-PA | 170 | GF21218-PA | 1..170 | 1..165 | 424 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17862-PA | 165 | GG17862-PA | 1..165 | 1..165 | 855 | 98.2 | Plus |
Dere\GG19704-PA | 195 | GG19704-PA | 44..186 | 12..154 | 459 | 60.8 | Plus |
Dere\GG17861-PA | 167 | GG17861-PA | 19..159 | 18..157 | 414 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24641-PA | 162 | GH24641-PA | 2..162 | 17..165 | 661 | 78.3 | Plus |
Dgri\GH12207-PA | 191 | GH12207-PA | 45..187 | 17..159 | 467 | 63.6 | Plus |
Dgri\GH24640-PA | 167 | GH24640-PA | 15..167 | 14..165 | 414 | 51 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33178-PC | 165 | CG33178-PC | 1..165 | 1..165 | 840 | 100 | Plus |
CG33178-PA | 165 | CG33178-PA | 1..165 | 1..165 | 840 | 100 | Plus |
CG33178-PB | 177 | CG33178-PB | 1..177 | 1..165 | 817 | 93.2 | Plus |
Mgstl-PA | 152 | CG1742-PA | 1..146 | 12..157 | 446 | 61 | Plus |
CG33177-PA | 167 | CG33177-PA | 19..167 | 18..165 | 405 | 52.3 | Plus |
Mgstl-PC | 151 | CG1742-PC | 5..145 | 17..157 | 392 | 54.6 | Plus |
Mgstl-PB | 151 | CG1742-PB | 5..145 | 17..157 | 392 | 54.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21688-PA | 177 | GI21688-PA | 17..177 | 17..165 | 680 | 80.1 | Plus |
Dmoj\GI15739-PA | 150 | GI15739-PA | 4..141 | 17..154 | 445 | 60.9 | Plus |
Dmoj\GI21687-PA | 159 | GI21687-PA | 11..159 | 18..165 | 384 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15178-PA | 163 | GL15178-PA | 2..163 | 5..165 | 734 | 85.8 | Plus |
Dper\GL16397-PA | 195 | GL16397-PA | 44..191 | 12..159 | 460 | 60.1 | Plus |
Dper\GL15177-PA | 166 | GL15177-PA | 10..166 | 12..165 | 413 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22801-PA | 163 | GA22801-PA | 2..163 | 5..165 | 734 | 85.8 | Plus |
Dpse\GA14506-PA | 195 | GA14506-PA | 44..191 | 12..159 | 460 | 60.1 | Plus |
Dpse\GA22800-PA | 166 | GA22800-PA | 10..166 | 12..165 | 412 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12056-PA | 165 | GM12056-PA | 1..165 | 1..165 | 866 | 100 | Plus |
Dsec\GM23058-PA | 195 | GM23058-PA | 44..186 | 12..154 | 460 | 61.5 | Plus |
Dsec\GM12055-PA | 167 | GM12055-PA | 19..167 | 18..165 | 414 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17192-PA | 165 | GD17192-PA | 1..165 | 1..165 | 866 | 100 | Plus |
Dsim\GD17510-PA | 195 | GD17510-PA | 44..186 | 12..154 | 457 | 61.5 | Plus |
Dsim\GD17191-PA | 167 | GD17191-PA | 19..167 | 18..165 | 414 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15869-PA | 162 | GJ15869-PA | 2..162 | 17..165 | 675 | 79.5 | Plus |
Dvir\GJ18600-PA | 191 | GJ18600-PA | 51..182 | 23..154 | 450 | 65.2 | Plus |
Dvir\GJ15868-PA | 165 | GJ15868-PA | 1..165 | 1..165 | 425 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16260-PA | 185 | GK16260-PA | 2..185 | 5..165 | 698 | 76.1 | Plus |
Dwil\GK25033-PA | 152 | GK25033-PA | 1..148 | 12..159 | 444 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17164-PA | 165 | GE17164-PA | 1..165 | 1..165 | 863 | 99.4 | Plus |
Dyak\GE17903-PA | 195 | GE17903-PA | 44..186 | 12..154 | 434 | 59.4 | Plus |
Dyak\GE17163-PA | 167 | GE17163-PA | 19..167 | 18..165 | 418 | 52.3 | Plus |