BDGP Sequence Production Resources |
Search the DGRC for RH14732
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 147 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG3009-RA |
Protein status: | RH14732.pep: gold |
Sequenced Size: | 2068 |
Gene | Date | Evidence |
---|---|---|
CG3009 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3009 | 2005-05-17 | Blastp of sequenced clone |
CG3009 | 2008-04-29 | Release 5.5 accounting |
CG3009 | 2008-08-15 | Release 5.9 accounting |
CG3009 | 2008-12-18 | 5.12 accounting |
2068 bp (2068 high quality bases) assembled on 2005-05-17
GenBank Submission: BT022722
> RH14732.complete GAGTTGCGCCGCAAACGCGTCGCGGAAATGTTTCGCTGCTTCAGCTGCTG CTGCCACCGTCCGAAAGAAATCGAAATCGAAACCGAAATTTAATTTCAAT TTTCAATAAAAATTTAAAGCCACAATTTAAGCAACGCGCCGCCGTCCTCT TTGAATTCCGCATCCTTGGCAACCGTTACCGAATTAGAACACATAGTAAA ACCCGATACAACGAAACGGGAATTCAAACCGTTTGATAATTTACTCCTTC CTCCCTAAAGTTCTCAGTTGGCGCCATGAGGGAACCACTGCCCGTGGCGG TGGTGACGTTGCTCCTGTTCCTGTGGCTCGGTTCGGCGATGCCACCCACA TCTGGTTCGGCGGTGCTCATCTCCGACATGACCATGAGCGTCATGGTGGA GCTATCCTCGCGACATCCCTTCTGCAAGATGCACACAGATCGTGGTGATA TCCAGCGCATGTTGCTGCAATCGGATCCGCGACGCATACGCCAGGTGCCG CGGGAGTCGGTGATGGAGCTCGAGGAGGTGTGCCGCCGTCAGGGATCCTA TGGCCACGAGTTTCGCGGCGGACTGGGCTTCATCTATCCGGGCACAAAGT GGTGCGGACCGGGCACAGCGGCCACCAGCTACGACGATCTCGGTGCGCAC GCTCGCGAGGATCGCTGCTGTCGCGAGCACGACATGTGTCCCGATGTGCT AAATGTGGGCGAATGCAGGCGAGGATTGTGCAATCGCGGCACATTCACGA GAAGCCACTGCGATTGCGATGCCCGGTTCAGGCGATGCTTGCAGGCGGCA AACACGGAGACGGCCAATACGCTGGGCGCCATCTTCTACAATGTGGTGCA GGTGACGTGCTTCCAGGAGCGGAGTCCCTGCTCGGCACACCAGAGGTTCG AGGACTTCTACTACCGCACCGATCACTGTCCGGCGGAATTCCGGCAGGCG GATCTCTATGTGCCGCCGCACGGTGACAATCTGATAGCCAAGATCCTGGC CCATCCGCAGGGCCGGGCCCTGGCCGCTCCGTCCTGGACGATTCCCGCCA AGTCGACGGCGCGCCGTTGGGGCGTTAAATTGGCCAGCGTTGGCTTGGCG GCGGTGAATATCCTGCGGGAGGTGGTGCAGCGACCCCGACTCCTGTGGGA TAGCCTGCAGGCGCCGGTCTCCAGGGAGCTACCACCGCCGCAAAGATATC ACGATCCGGGCTATCACTACGAGCGACCCGGACCCGGCTCGTCCTACGGA TATGGCCAATACAGTGGTCGCGGTTACGGGGGCTTCGACTCCCCTTGGAG CTAATTGCGGTATCACGAATGCCCCCGGAAGACTGTTCTGAGCGATTGGG TGGAGTCCACTGGTCACGCGAAAATATGTTCCGTATGGCGAGTAATCCAA AAGGCAGTTGTAAATGATATACAAGTACATACTAGGTTAGAGATTAGACA GGATTAAAGATAGACATTCAATTGCCAAAGAAAAGCGCAGCAAGTACACT TTAAGAAAATATCGCTTTCATACTTCGAAACGTGTGTATGAAGTTAATCG GCGCGAATTCTTTGTTTCATCCTGTTTTATATTCTGGTAAAGTTTTTCAT TCTGTCGGTTACTTATTATTCTGGAAAAGTTTCACTGTCATCAGATTTGC CATCTTCGCGTGGGAAGAGAATGGGAATTGATACTTTAAATGGGTTTTTT TTTGTGTAAGATAACCTTTTGTGAGTCACTAAGTGGTAAGGTAGAGAGAT AGCTTTTAAGCAGACATAAACTTCATTGTACCGATGCGTATTTTTTTTTT TAACAGAATTTGAAGATTACTCTGCCAATCGGTTAACTATTTGCTAGACC ACACATGGATTGAACCGCCCAACTGCTCCCGCTTAGTATTAGTAGTCATA AGTTGCAGTTACGGCTCCGCTAGGGAGTCGCAATCCTAGCTAACTTAGCT GCATGTGTGATTGCCATTAACGTTATGCATGTACCGTGTTCACTAGTTGA CCATTTGACCATTTGACAGTTGTGCTTTAGAAATAAACTCACTGAGAATT CGCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4551367..4552962 | 2053..442 | 7585 | 98.3 | Minus |
chrX | 22417052 | chrX | 4559210..4559475 | 267..2 | 1330 | 100 | Minus |
chrX | 22417052 | chrX | 4553032..4553212 | 442..262 | 905 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4551367..4551514 | 1906..2053 | 97 | == | Minus |
chrX | 4551515..4552961 | 443..1891 | 99 | <- | Minus |
chrX | 4553032..4553206 | 268..442 | 100 | <- | Minus |
chrX | 4559210..4559475 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RB | 1..1029 | 276..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RB | 1..1029 | 276..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 1..1029 | 276..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 1..1029 | 276..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 1..1029 | 276..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 2..2053 | 2..2053 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 2..2053 | 2..2053 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 4..2056 | 1..2053 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 2..2053 | 2..2053 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3009-RA | 4..2056 | 1..2053 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4660258..4660432 | 268..442 | 100 | <- | Minus |
X | 4658577..4660187 | 443..2053 | 100 | <- | Minus |
X | 4666431..4666696 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4660258..4660432 | 268..442 | 100 | <- | Minus |
X | 4658577..4660187 | 443..2053 | 100 | <- | Minus |
X | 4666431..4666696 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4660258..4660432 | 268..442 | 100 | <- | Minus |
X | 4658577..4660187 | 443..2053 | 100 | <- | Minus |
X | 4666431..4666696 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4552610..4554220 | 443..2053 | 100 | <- | Minus |
arm_X | 4554291..4554465 | 268..442 | 100 | <- | Minus |
arm_X | 4560464..4560729 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4666675..4668285 | 443..2053 | 100 | <- | Minus |
X | 4668356..4668530 | 268..442 | 100 | <- | Minus |
X | 4674529..4674794 | 1..267 | 99 | Minus |
Translation from 275 to 1303
> RH14732.pep MREPLPVAVVTLLLFLWLGSAMPPTSGSAVLISDMTMSVMVELSSRHPFC KMHTDRGDIQRMLLQSDPRRIRQVPRESVMELEEVCRRQGSYGHEFRGGL GFIYPGTKWCGPGTAATSYDDLGAHAREDRCCREHDMCPDVLNVGECRRG LCNRGTFTRSHCDCDARFRRCLQAANTETANTLGAIFYNVVQVTCFQERS PCSAHQRFEDFYYRTDHCPAEFRQADLYVPPHGDNLIAKILAHPQGRALA APSWTIPAKSTARRWGVKLASVGLAAVNILREVVQRPRLLWDSLQAPVSR ELPPPQRYHDPGYHYERPGPGSSYGYGQYSGRGYGGFDSPWS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20851-PA | 330 | GF20851-PA | 14..330 | 19..342 | 1441 | 86.5 | Plus |
Dana\GF22231-PA | 309 | GF22231-PA | 197..302 | 100..208 | 258 | 43.1 | Plus |
Dana\GF21312-PA | 204 | GF21312-PA | 71..177 | 102..207 | 244 | 43.9 | Plus |
Dana\GF12957-PA | 186 | GF12957-PA | 42..156 | 101..215 | 221 | 39.7 | Plus |
Dana\GF11953-PA | 172 | GF11953-PA | 22..145 | 99..216 | 215 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18524-PA | 342 | GG18524-PA | 1..342 | 1..342 | 1782 | 96.2 | Plus |
Dere\GG17755-PA | 309 | GG17755-PA | 197..297 | 100..200 | 260 | 44.6 | Plus |
Dere\GG19301-PA | 217 | GG19301-PA | 84..190 | 102..207 | 243 | 44.9 | Plus |
Dere\GG23279-PA | 186 | GG23279-PA | 42..155 | 101..214 | 216 | 37.4 | Plus |
Dere\GG10751-PA | 173 | GG10751-PA | 24..138 | 100..215 | 206 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17900-PA | 337 | GH17900-PA | 22..318 | 22..319 | 1313 | 83.8 | Plus |
Dgri\GH12690-PA | 321 | GH12690-PA | 209..309 | 100..200 | 257 | 43.6 | Plus |
Dgri\GH21166-PA | 189 | GH21166-PA | 42..150 | 101..209 | 229 | 42.7 | Plus |
Dgri\GH24101-PA | 230 | GH24101-PA | 101..210 | 102..210 | 228 | 43.6 | Plus |
Dgri\GH20736-PA | 172 | GH20736-PA | 19..132 | 99..212 | 208 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3009-PB | 342 | CG3009-PB | 1..342 | 1..342 | 1876 | 100 | Plus |
CG3009-PA | 342 | CG3009-PA | 1..342 | 1..342 | 1876 | 100 | Plus |
CG3009-PD | 239 | CG3009-PD | 1..232 | 1..230 | 1128 | 90.6 | Plus |
CG42237-PB | 309 | CG42237-PB | 197..297 | 100..200 | 259 | 44.6 | Plus |
CG42237-PA | 363 | CG4346-PA | 251..351 | 100..200 | 259 | 44.6 | Plus |
GIIIspla2-PC | 217 | CG1583-PC | 85..190 | 103..207 | 245 | 44.3 | Plus |
GIIIspla2-PB | 217 | CG1583-PB | 85..190 | 103..207 | 245 | 44.3 | Plus |
sPLA2-PC | 186 | CG11124-PC | 42..155 | 101..214 | 232 | 38.3 | Plus |
sPLA2-PA | 186 | CG11124-PA | 42..155 | 101..214 | 232 | 38.3 | Plus |
CG30503-PB | 173 | CG30503-PB | 16..163 | 92..232 | 227 | 36.9 | Plus |
CG30503-PA | 173 | CG30503-PA | 16..163 | 92..232 | 227 | 36.9 | Plus |
sPLA2-PB | 101 | CG11124-PB | 42..92 | 101..151 | 148 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15422-PA | 138 | GI15422-PA | 21..121 | 22..125 | 429 | 80.8 | Plus |
Dmoj\GI16365-PA | 312 | GI16365-PA | 200..300 | 100..200 | 266 | 44.6 | Plus |
Dmoj\GI14370-PA | 213 | GI14370-PA | 81..187 | 102..207 | 245 | 44.9 | Plus |
Dmoj\GI18761-PA | 184 | GI18761-PA | 42..150 | 101..209 | 234 | 41.8 | Plus |
Dmoj\GI20819-PA | 165 | GI20819-PA | 19..110 | 99..190 | 207 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14551-PA | 359 | GL14551-PA | 15..320 | 19..320 | 1394 | 88.9 | Plus |
Dper\GL14950-PA | 352 | GL14950-PA | 197..297 | 100..200 | 261 | 44.6 | Plus |
Dper\GL20365-PA | 206 | GL20365-PA | 75..173 | 102..199 | 238 | 46.5 | Plus |
Dper\GL10932-PA | 168 | GL10932-PA | 22..123 | 99..201 | 223 | 44.7 | Plus |
Dper\GL11167-PA | 186 | GL11167-PA | 42..155 | 101..214 | 220 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15641-PA | 334 | GA15641-PA | 15..317 | 19..317 | 1377 | 88.8 | Plus |
Dpse\GA18124-PA | 309 | GA18124-PA | 197..297 | 100..200 | 262 | 44.6 | Plus |
Dpse\GA13978-PA | 206 | GA13978-PA | 75..173 | 102..199 | 237 | 46.5 | Plus |
Dpse\GA10773-PA | 186 | GA10773-PA | 42..155 | 101..214 | 220 | 39.1 | Plus |
Dpse\GA15891-PA | 168 | GA15891-PA | 22..123 | 99..201 | 218 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12671-PA | 340 | GM12671-PA | 1..340 | 1..342 | 1786 | 98 | Plus |
Dsec\GM11601-PA | 363 | GM11601-PA | 251..356 | 100..208 | 261 | 43.1 | Plus |
Dsec\GM11233-PA | 218 | GM11233-PA | 85..191 | 102..207 | 244 | 44.9 | Plus |
Dsec\GM20955-PA | 186 | GM20955-PA | 42..155 | 101..214 | 221 | 39.1 | Plus |
Dsec\GM20797-PA | 173 | GM20797-PA | 22..146 | 98..216 | 205 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17099-PA | 277 | GD17099-PA | 165..270 | 100..208 | 260 | 43.1 | Plus |
Dsim\GD10480-PA | 186 | GD10480-PA | 42..155 | 101..214 | 221 | 39.1 | Plus |
Dsim\GD10259-PA | 173 | GD10259-PA | 22..147 | 98..217 | 201 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16381-PA | 337 | GJ16381-PA | 21..332 | 22..326 | 1332 | 84.2 | Plus |
Dvir\GJ16735-PA | 321 | GJ16735-PA | 209..309 | 100..200 | 263 | 44.6 | Plus |
Dvir\GJ19410-PA | 229 | GJ19410-PA | 97..203 | 102..207 | 240 | 43.9 | Plus |
Dvir\GJ21785-PA | 187 | GJ21785-PA | 42..150 | 101..209 | 226 | 40.9 | Plus |
Dvir\GJ20552-PA | 166 | GJ20552-PA | 19..115 | 99..196 | 224 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25148-PA | 983 | GK25148-PA | 13..326 | 18..325 | 1455 | 85.5 | Plus |
Dwil\GK17378-PA | 314 | GK17378-PA | 202..302 | 100..200 | 263 | 44.6 | Plus |
Dwil\GK21320-PA | 188 | GK21320-PA | 44..153 | 101..210 | 229 | 41.4 | Plus |
Dwil\GK19962-PA | 206 | GK19962-PA | 74..169 | 102..196 | 218 | 44.8 | Plus |
Dwil\GK22012-PA | 157 | GK22012-PA | 11..110 | 101..201 | 207 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16841-PA | 345 | GE16841-PA | 1..345 | 1..342 | 1665 | 92.2 | Plus |
Dyak\GE17044-PA | 262 | GE17044-PA | 150..250 | 100..200 | 260 | 44.6 | Plus |
Dyak\GE15768-PA | 217 | GE15768-PA | 84..190 | 102..207 | 241 | 43.9 | Plus |
Dyak\GE19126-PA | 186 | GE19126-PA | 42..155 | 101..214 | 220 | 39.1 | Plus |
Dyak\GE24036-PA | 173 | GE24036-PA | 24..119 | 100..196 | 201 | 45.4 | Plus |
Translation from 275 to 1303
> RH14732.hyp MREPLPVAVVTLLLFLWLGSAMPPTSGSAVLISDMTMSVMVELSSRHPFC KMHTDRGDIQRMLLQSDPRRIRQVPRESVMELEEVCRRQGSYGHEFRGGL GFIYPGTKWCGPGTAATSYDDLGAHAREDRCCREHDMCPDVLNVGECRRG LCNRGTFTRSHCDCDARFRRCLQAANTETANTLGAIFYNVVQVTCFQERS PCSAHQRFEDFYYRTDHCPAEFRQADLYVPPHGDNLIAKILAHPQGRALA APSWTIPAKSTARRWGVKLASVGLAAVNILREVVQRPRLLWDSLQAPVSR ELPPPQRYHDPGYHYERPGPGSSYGYGQYSGRGYGGFDSPWS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3009-PB | 342 | CG3009-PB | 1..342 | 1..342 | 1876 | 100 | Plus |
CG3009-PA | 342 | CG3009-PA | 1..342 | 1..342 | 1876 | 100 | Plus |
CG3009-PD | 239 | CG3009-PD | 1..232 | 1..230 | 1128 | 90.6 | Plus |
CG42237-PB | 309 | CG42237-PB | 197..297 | 100..200 | 259 | 44.6 | Plus |
CG42237-PA | 363 | CG4346-PA | 251..351 | 100..200 | 259 | 44.6 | Plus |