Clone RH14840 Report

Search the DGRC for RH14840

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:148
Well:40
Vector:pFlc-1
Associated Gene/TranscriptFER-RA
Protein status:RH14840.pep: gold
Preliminary Size:3994
Sequenced Size:4972

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8874 2002-01-01 Sim4 clustering to Release 2
CG8874 2002-05-18 Blastp of sequenced clone
CG8874 2003-01-01 Sim4 clustering to Release 3
Fps85D 2008-04-29 Release 5.5 accounting
Fps85D 2008-08-15 Release 5.9 accounting
Fps85D 2008-12-18 5.12 accounting

Clone Sequence Records

RH14840.complete Sequence

4972 bp (4972 high quality bases) assembled on 2002-05-18

GenBank Submission: BT003462

> RH14840.complete
GAGTTTCCGCTGAACATTCGAGGCGAACGGTTCGCTGTGTTTGGGCCTGC
TTTCAATATTCCCCGATTTCCGGACTCGATTCGATCCAATCCGAGCCAAA
CCAATTCGAGATACTCGGCGCTGAGCTCCATTCGCGATTTTTGAGTTCTG
TGGCCATGTGAAGTGCACGCATCTCGAAGTGCCAAAATAAGTTCTGATAA
AGCCTTCAAAACGATAACCAGCCTTATTCAATTATGTTTGTGCCAAGAAC
TGTGCTCTAGTTACGCGATTTGCAAGTGAAATCCGACGGCAAAGAAATTC
TGCGAGAGCCGCGACCCAAATAGGGAGTAACGAGAGCATCATGGGCTTCT
CATCAGCCCTCCAAAGTCGCGCCGCCCACGAGGCGCTGATCGTCCGCCAG
GATGCCGAACTCCGGCTAATGGAGACAATGAAGCGATCCATCCAGATGAA
GGCCAAGTGCGACAAGGAGTACGCCATCAGCCTGACCGCTGTGGCCCAGC
AGGGTCTCAAGATCGATCGGGCTGACGAAATGCAAGGCAGCCTGATCTCC
AAATCCTGGCGATCCTACATGGATGAACTGGACCACCAGGCCAAACAGTT
CAAGTTCAACGCGGAGCAGCTGGAGGTCGTCTGCGATAAGTTGACCCACC
TCTCGCAGGACAAACGGAAGGCCAGAAAGGCCTACCAGGAGGAGCATGCC
AAGATCGCAGCACGCCTGAATCATCTCACCGACGAGGTGGTGCGCAAGAA
ATCTGAATACCAAAAACATTTGGAGGGCTACAAGGCGCTGCGCACGCGCT
TCGAGGAGAACTACATAAAGGCACCCAGTCGCAGTGGCCGCAAGCTGGAC
GATGTGCGTGACAAGTATCAGAAGGCCTGCCGCAAATTGCATCTCACACA
CAACGAGTACGTGCTGTCCATCACGGAAGCCATCGAAGTGGAGAAGGACT
TTCGCAACGTCTTGCTGCCGGGACTGCTGGAGCATCAGCAGTCCGTTCAG
GAGAGCTTCATCCTGCTGTGGCGCAACATCCTGCAGGAGGCGGCCCAGTA
TGGCGACCTCACGGCCGACAAGTACAAGGAGATCCAGAAGCGCATTGACA
CTGTGATAGGGAGCATCAATCCGACCGAGGAGTACGGCGAGTTCACCGAG
AAATACAAAACCTCTCCCACAACACCGCTGCTCTTCCAGTTCGATGAGAC
GCTCATCCAGGATATTCCCGGCAAATTGCAGTCGAGCACATTGACAGTGG
ACAACCTCACGGTGGACTGGCTGCGTAATCGTCTCCAGGAACTGGAGGGA
GCCGTCAGGGATTGCCAGGAGAAGCAGATGAAGATGATCGAGCATGTGAA
TGGTGGCTCGCCGGTGGCCAATGGCAGCATTATATCCAACGGCAGCAACA
CATCCAACGGCATTCAGTCCAACAAGGATAGCCTATGCCGCCAGTCGAAG
GACCTTAATGCACTGCGCTGCCAGGAGAAGCAGAAACAGAAGCTGGTGGA
CATGATCAAGTGCGCCCTGAACGAGGTGGGATGCGAGGAGCTGCCCTCCG
GTTGCGACGATGACCTCACCCTGGAGCAGAACTTCATCGAGAATGGCTAT
AACAACGAACAGCAGAGATCCAACTCCACCAGTTCACCAGGTCTGGGCAT
AATGAACGAGCTGATGCGACGCGGTGGGGTATTGACCCTCTTGCGTGGAA
GGGGTCGCCACTTTAAGCGCAAGAGTACACCACAACCGGCGACGCCGATG
ACGCGATCGCGACAAGGACGGTTCAACAAGTTGCAACCACGATCCCAGAG
CCTCGGATCCTTGTCGGTAATTAGGGATGGGAATGGGCCAAGTCCTGCAC
GTTACGAGCCCATTACTAACCATCGTTTGCGCCAGGCGGCAAGTGTTCAT
TATTTGGGCGAGGAGATCGCCACGAGCTCCACTAATCCGCCCGATTTGAC
GCGTCTGCGACGAACCCAATGTTCCATGTTGTGTTTGGGCGAGGACGAGG
AGCCTGTTGTCCTTGCCTCGCCCGCCCCGCTCACTCAGCTTACCGCTGCT
GTCCTTACTAACACCAATAACAATCATATCTATGCCGATCTGGAGTTGGA
TAAAAAGAAGGATACTTCACCGAGTCCAGAATGTAAGGGGGAGCAAATTC
AACCGAAAAAAGAGCAAATACGAATTGAAATCAACCAAACCGCGCCTCAG
AACTCCATTGATGCCCATCTGGACAGGATTGATGAGCTGAACCGAGTGCT
AGACGATCGGCTGAAGCGTACTCTTCAGCCCAGCGATGATGTGAATGCCA
TCGAAAGTGCCGAGGAGAATCACATACAAACCAGGAAGTTGGCCAAAGAT
CCAGATAGCCAAACGAAACGCAGCTCCAGTTCCAGTTCAGAGTGCCGGTC
CTCCAAGGACACGAGTCACTCCAAGAAGCGTTCCCTGTCTTTTAGTCAGA
AATCCATAAGCAACATATTCAGCAACCTAAAGGAGTTCTCTAAGAGTCCA
CTCGTTAGGATGGGCAAGAATCATATCCTCAACGAAGAGCAGGATGCGAA
AAGGACGCAGCCAAGTCAACATCATCATTCCAGTGGCAGTGATTGCCCCA
CAAACAGTAGCAGCTCCAGCAGTAATAATAATAATAATAATAAAAATACC
AGTAGCAATAGCAATCACAGTGCCTCACAGTCCACGATAATAACGAGCAC
GATCACCACCACCATAACGACTACAACTACCACGACGCCGTCCAAGGAAA
ACTCAAGACTGAAATTCAAAGTGCCCAAGATCCAGAAGAAATCAAAGGCC
ATCCGCAATACATTCCGCTCCAAGTTGCTCAATTTCCAGTTGAAGCGCTC
CAAGCCGTGCAAACAGTGCACCAAGAGACGTCGCATCCATCCCAGCAAAA
GTGTCTTTGATTTTGCCAAAGAGTTCGAGGTGGAACAACCGGCTGGTTCG
GCGGCGGATGAGCAATTCTGCAACTGTCCGCCAGCTGGTCAAAAGCCTGT
TAAGCCATCCGTCCAAATATCCGGCCACAAAGATCACCCGTTCGAGTCCA
GTTCTGGAGAGCTGGACGAGAACTCGGATCGGGACATCGACAACGACGAG
GAGGAGGAGGATAGCGCCAGTGACGACGTGCTCAGCATGAAGGATCACTG
CTATTGCGTGCCCAGCCTGGCGGCCAGTATATCGCTCTCCACAAATCGTC
CGCTTTACGAGGAGGAATGGTTCCATGGCGTTCTGCCGCGCGAGGAAGTG
GTTCGATTGCTGAATAACGATGGTGACTTCCTGGTCCGCGAAACGATTCG
AAACGAGGAGAGCCAGATTGTGCTCAGTGTCTGTTGGAATGGCCATAAGC
ACTTCATTGTCCAGACCACCGGAGAGGGTAATTTCCGGTTCGAGGGACCA
CCATTTGCCAGCATCCAGGAGCTGATCATGCATCAGTATCACTCGGAATT
GCCAGTGACCGTGAAATCGGGAGCCATACTCCGACGACCCGTTTGCCGGG
AGCGCTGGGAGCTGAGCAACGATGATGTGGTACTTCTGGAGAGGATTGGT
CGGGGAAACTTTGGGGATGTCTACAAGGCCAAACTGAAGTCCACCAAACT
GGATGTGGCTGTCAAAACCTGTCGAATGACCCTGCCCGACGAACAGAAGC
GTAAATTCCTACAGGAAGGGCGCATCCTCAAGCAATACGATCATCCAAAT
ATCGTAAAATTGATTGGCATTTGTGTGCAGAAGCAGCCCATCATGATTGT
CATGGAATTGGTGCTCGGTGGTTCGCTTTTAACTTATTTACGCAAGAACT
CCAATGGCCTCACCACTCGCCAACAAATGGGCATGTGCAGAGATGCGGCG
GCAGGCATGCGATATCTGGAGTCCAAAAACTGCATTCATCGCGATCTGGC
GGCGCGTAATTGTCTCGTTGACTTGGAGCACAGTGTGAAGATCTCCGATT
TCGGAATGTCTCGCGAGGAAGAGGAATATATAGTTTCCGATGGCATGAAA
CAAATACCTGTGAAGTGGACAGCTCCCGAGGCCTTGAATTTCGGCAAGTA
CACTTCGTTGTGCGATGTGTGGTCCTATGGCATACTGATGTGGGAGATCT
TCTCCAAGGGCGACACACCCTACTCCGGCATGACCAACTCCAGAGCCAGA
GAGCGCATCGATACGGGATATCGTATGCCAACGCCGAAGAGCACGCCCGA
GGAGATGTACCGACTGATGCTCCAGTGCTGGGCAGCCGACGCCGAATCCC
GACCGCATTTCGATGAGATCTACAATGTGGTGGATGCACTGATTCTGCGC
CTGGACAACAGCCACTAAGAGCGGCTCCATGCGGAACACTTAGCGTATAC
TCAACGTAGATTTAGTCAGCGCTTTTAAAGTACGTTACGTCCGAGGACTT
GACAACGAGTTGCCTGTATTTATGAGATAGCACGTACCTACTATACATTT
TACCATATAAACCATATTTATATAGAGACATATATATTTTCTAGCCATGT
AAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGT
ATGTTATAAATCCTTAATGTGCCAAAAACCGCAAGAGATCTTAAAACAAA
AAAAAAAGTGAAACGAAAAAAAGATAAGAGAAAATAAAATAAAACTGATA
TTGTGTGTCTGCTTGAAGAACGGCGTTCGTAACCTAAGCTCATGAATTTA
TATATTTTTAGTTGTTTGTGTTTTAGTTTTTAGGCAGTGATTCATAATTT
GTATATTATGCAATCCCTACGTTTGTCAATTTGTTTCTAGACTTTGTATT
CTATGTATATTTATTTACACCTAATTTACATTTCTACTTCGACTACGATT
ATGTTTACTCTAATACAACTAAGCTCTAAGTTAAAGCTTTAAGTTTTGCT
GCGCTGCTGAAGTGAATAAATCATATGTGTACTATATATATATATATACA
GAAGAGAAAAAAAAAAAAAAAA

RH14840.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:01:52
Subject Length Description Subject Range Query Range Score Percent Strand
Fps85D-RA 4987 Fps85D-RA 29..4985 2..4958 24740 99.9 Plus
Fps85D.a 3439 Fps85D.a 1661..3439 3179..4957 8880 99.9 Plus
Fps85D-RB 3536 Fps85D-RB 1758..3536 3179..4957 8880 99.9 Plus
Fps85D-RB 3536 Fps85D-RB 144..1762 2..1620 8080 99.9 Plus
Fps85D.a 3439 Fps85D.a 580..1665 535..1620 5415 99.9 Plus
Fps85D.a 3439 Fps85D.a 29..563 2..536 2675 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5196778..5198345 3178..1611 7765 99.7 Minus
chr3R 27901430 chr3R 5193365..5194155 4956..4166 3865 99.2 Minus
chr3R 27901430 chr3R 5195097..5195472 3554..3179 1880 100 Minus
chr3R 27901430 chr3R 5199094..5199431 1158..821 1690 100 Minus
chr3R 27901430 chr3R 5220048..5220350 304..2 1515 100 Minus
chr3R 27901430 chr3R 5198753..5199031 1437..1159 1380 99.6 Minus
chr3R 27901430 chr3R 5218542..5218775 537..304 1170 100 Minus
chr3R 27901430 chr3R 5194814..5195031 3770..3553 1060 99.1 Minus
chr3R 27901430 chr3R 5216688..5216877 724..535 950 100 Minus
chr3R 27901430 chr3R 5194217..5194404 4167..3980 940 100 Minus
chr3R 27901430 chr3R 5198519..5198697 1615..1437 880 99.4 Minus
chr3R 27901430 chr3R 5194461..5194591 3983..3853 640 99.2 Minus
chr3R 27901430 chr3R 5199542..5199638 821..725 485 100 Minus
chr3R 27901430 chr3R 5194658..5194746 3855..3767 430 98.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:23:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9371015..9372582 3178..1611 7810 99.9 Minus
3R 32079331 3R 9367601..9368393 4958..4166 3950 99.9 Minus
3R 32079331 3R 9369335..9369710 3554..3179 1880 100 Minus
3R 32079331 3R 9373331..9373668 1158..821 1690 100 Minus
3R 32079331 3R 9394241..9394543 304..2 1515 100 Minus
3R 32079331 3R 9372990..9373268 1437..1159 1395 100 Minus
3R 32079331 3R 9392740..9392973 537..304 1170 100 Minus
3R 32079331 3R 9369052..9369269 3770..3553 1090 100 Minus
3R 32079331 3R 9390886..9391075 724..535 950 100 Minus
3R 32079331 3R 9368455..9368642 4167..3980 940 100 Minus
3R 32079331 3R 9372756..9372934 1615..1437 895 100 Minus
3R 32079331 3R 9368699..9368829 3983..3853 655 100 Minus
3R 32079331 3R 9373779..9373875 821..725 485 100 Minus
3R 32079331 3R 9368896..9368984 3855..3767 445 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9111846..9113413 3178..1611 7810 99.8 Minus
3R 31820162 3R 9108432..9109224 4958..4166 3950 99.8 Minus
3R 31820162 3R 9110166..9110541 3554..3179 1880 100 Minus
3R 31820162 3R 9114162..9114499 1158..821 1690 100 Minus
3R 31820162 3R 9135072..9135374 304..2 1515 100 Minus
3R 31820162 3R 9113821..9114099 1437..1159 1395 100 Minus
3R 31820162 3R 9133571..9133804 537..304 1170 100 Minus
3R 31820162 3R 9109883..9110100 3770..3553 1090 100 Minus
3R 31820162 3R 9131717..9131906 724..535 950 100 Minus
3R 31820162 3R 9109286..9109473 4167..3980 940 100 Minus
3R 31820162 3R 9113587..9113765 1615..1437 895 100 Minus
3R 31820162 3R 9109530..9109660 3983..3853 655 100 Minus
3R 31820162 3R 9114610..9114706 821..725 485 100 Minus
3R 31820162 3R 9109727..9109815 3855..3767 445 100 Minus
Blast to na_te.dros performed on 2019-03-15 20:31:15 has no hits.

RH14840.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:32:22 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5193365..5193676 4645..4956 99 == Minus
chr3R 5193729..5194154 4167..4592 99 <- Minus
chr3R 5194218..5194400 3984..4166 100 <- Minus
chr3R 5194461..5194589 3855..3983 99 <- Minus
chr3R 5194659..5194745 3768..3854 98 <- Minus
chr3R 5194817..5195030 3554..3767 99 <- Minus
chr3R 5195098..5195472 3179..3553 100 <- Minus
chr3R 5196778..5198340 1616..3178 98 <- Minus
chr3R 5198519..5198696 1438..1615 99 <- Minus
chr3R 5198753..5199031 1159..1437 99 <- Minus
chr3R 5199094..5199430 822..1158 100 <- Minus
chr3R 5199542..5199638 725..821 100 <- Minus
chr3R 5216688..5216875 537..724 100 <- Minus
chr3R 5218543..5218774 305..536 100 <- Minus
chr3R 5220048..5220350 1..304 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:49:05 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 1..3978 341..4318 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:58:44 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 1..3978 341..4318 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:14:40 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 1..3978 341..4318 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:58:12 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 1..3978 341..4318 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:23:11 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
FER-RA 1..3978 341..4318 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:49:04 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 1..4955 2..4956 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:58:44 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 1..4955 2..4956 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:14:40 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 3..4958 1..4956 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:58:12 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
Fps85D-RA 1..4955 2..4956 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:23:11 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
FER-RA 3..4958 1..4956 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:32:22 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9367603..9368392 4167..4956 99 <- Minus
3R 9368456..9368638 3984..4166 100 <- Minus
3R 9368699..9368827 3855..3983 100 <- Minus
3R 9368897..9368983 3768..3854 100 <- Minus
3R 9369055..9369268 3554..3767 100 <- Minus
3R 9369336..9369710 3179..3553 100 <- Minus
3R 9371015..9372577 1616..3178 99 <- Minus
3R 9372756..9372933 1438..1615 100 <- Minus
3R 9372990..9373268 1159..1437 100 <- Minus
3R 9373331..9373667 822..1158 100 <- Minus
3R 9373779..9373875 725..821 100 <- Minus
3R 9390886..9391073 537..724 100 <- Minus
3R 9392741..9392972 305..536 100 <- Minus
3R 9394241..9394543 1..304 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:32:22 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9367603..9368392 4167..4956 99 <- Minus
3R 9368456..9368638 3984..4166 100 <- Minus
3R 9368699..9368827 3855..3983 100 <- Minus
3R 9368897..9368983 3768..3854 100 <- Minus
3R 9369055..9369268 3554..3767 100 <- Minus
3R 9369336..9369710 3179..3553 100 <- Minus
3R 9371015..9372577 1616..3178 99 <- Minus
3R 9372756..9372933 1438..1615 100 <- Minus
3R 9372990..9373268 1159..1437 100 <- Minus
3R 9373331..9373667 822..1158 100 <- Minus
3R 9373779..9373875 725..821 100 <- Minus
3R 9390886..9391073 537..724 100 <- Minus
3R 9392741..9392972 305..536 100 <- Minus
3R 9394241..9394543 1..304 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:32:22 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9367603..9368392 4167..4956 99 <- Minus
3R 9368456..9368638 3984..4166 100 <- Minus
3R 9368699..9368827 3855..3983 100 <- Minus
3R 9368897..9368983 3768..3854 100 <- Minus
3R 9369055..9369268 3554..3767 100 <- Minus
3R 9369336..9369710 3179..3553 100 <- Minus
3R 9371015..9372577 1616..3178 99 <- Minus
3R 9372756..9372933 1438..1615 100 <- Minus
3R 9372990..9373268 1159..1437 100 <- Minus
3R 9373331..9373667 822..1158 100 <- Minus
3R 9373779..9373875 725..821 100 <- Minus
3R 9390886..9391073 537..724 100 <- Minus
3R 9392741..9392972 305..536 100 <- Minus
3R 9394241..9394543 1..304 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:14:40 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5194619..5194705 3768..3854 100 <- Minus
arm_3R 5194777..5194990 3554..3767 100 <- Minus
arm_3R 5194178..5194360 3984..4166 100 <- Minus
arm_3R 5194421..5194549 3855..3983 100 <- Minus
arm_3R 5193325..5194114 4167..4956 99 <- Minus
arm_3R 5195058..5195432 3179..3553 100 <- Minus
arm_3R 5196737..5198299 1616..3178 99 <- Minus
arm_3R 5198478..5198655 1438..1615 100 <- Minus
arm_3R 5198712..5198990 1159..1437 100 <- Minus
arm_3R 5199053..5199389 822..1158 100 <- Minus
arm_3R 5199501..5199597 725..821 100 <- Minus
arm_3R 5216608..5216795 537..724 100 <- Minus
arm_3R 5218463..5218694 305..536 100 <- Minus
arm_3R 5219963..5220265 1..304 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:34:43 Download gff for RH14840.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9109287..9109469 3984..4166 100 <- Minus
3R 9109530..9109658 3855..3983 100 <- Minus
3R 9109728..9109814 3768..3854 100 <- Minus
3R 9109886..9110099 3554..3767 100 <- Minus
3R 9135072..9135374 1..304 99   Minus
3R 9108434..9109223 4167..4956 99 <- Minus
3R 9110167..9110541 3179..3553 100 <- Minus
3R 9111846..9113408 1616..3178 99 <- Minus
3R 9113587..9113764 1438..1615 100 <- Minus
3R 9113821..9114099 1159..1437 100 <- Minus
3R 9114162..9114498 822..1158 100 <- Minus
3R 9114610..9114706 725..821 100 <- Minus
3R 9131717..9131904 537..724 100 <- Minus
3R 9133572..9133803 305..536 100 <- Minus

RH14840.pep Sequence

Translation from 340 to 4317

> RH14840.pep
MGFSSALQSRAAHEALIVRQDAELRLMETMKRSIQMKAKCDKEYAISLTA
VAQQGLKIDRADEMQGSLISKSWRSYMDELDHQAKQFKFNAEQLEVVCDK
LTHLSQDKRKARKAYQEEHAKIAARLNHLTDEVVRKKSEYQKHLEGYKAL
RTRFEENYIKAPSRSGRKLDDVRDKYQKACRKLHLTHNEYVLSITEAIEV
EKDFRNVLLPGLLEHQQSVQESFILLWRNILQEAAQYGDLTADKYKEIQK
RIDTVIGSINPTEEYGEFTEKYKTSPTTPLLFQFDETLIQDIPGKLQSST
LTVDNLTVDWLRNRLQELEGAVRDCQEKQMKMIEHVNGGSPVANGSIISN
GSNTSNGIQSNKDSLCRQSKDLNALRCQEKQKQKLVDMIKCALNEVGCEE
LPSGCDDDLTLEQNFIENGYNNEQQRSNSTSSPGLGIMNELMRRGGVLTL
LRGRGRHFKRKSTPQPATPMTRSRQGRFNKLQPRSQSLGSLSVIRDGNGP
SPARYEPITNHRLRQAASVHYLGEEIATSSTNPPDLTRLRRTQCSMLCLG
EDEEPVVLASPAPLTQLTAAVLTNTNNNHIYADLELDKKKDTSPSPECKG
EQIQPKKEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRLKRTLQPSDD
VNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTSHSKKRSLS
FSQKSISNIFSNLKEFSKSPLVRMGKNHILNEEQDAKRTQPSQHHHSSGS
DCPTNSSSSSSNNNNNNKNTSSNSNHSASQSTIITSTITTTITTTTTTTP
SKENSRLKFKVPKIQKKSKAIRNTFRSKLLNFQLKRSKPCKQCTKRRRIH
PSKSVFDFAKEFEVEQPAGSAADEQFCNCPPAGQKPVKPSVQISGHKDHP
FESSSGELDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLAASISLS
TNRPLYEEEWFHGVLPREEVVRLLNNDGDFLVRETIRNEESQIVLSVCWN
GHKHFIVQTTGEGNFRFEGPPFASIQELIMHQYHSELPVTVKSGAILRRP
VCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLPD
EQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYL
RKNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVK
ISDFGMSREEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILM
WEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAAD
AESRPHFDEIYNVVDALILRLDNSH*

RH14840.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17770-PA 1392 GF17770-PA 1..1392 1..1325 5937 83.9 Plus
Dana\GF10512-PA 1708 GF10512-PA 321..698 955..1318 625 35.1 Plus
Dana\GF24724-PA 554 GF24724-PA 153..532 949..1308 592 37.1 Plus
Dana\GF15268-PA 786 GF15268-PA 351..770 899..1307 578 33.3 Plus
Dana\GF11039-PA 518 GF11039-PA 129..497 958..1310 558 35.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:33:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17381-PA 1331 GG17381-PA 1..1331 1..1325 6956 97 Plus
Dere\GG15861-PA 1619 GG15861-PA 249..626 955..1318 632 35.4 Plus
Dere\GG14172-PA 552 GG14172-PA 151..530 949..1308 592 37.1 Plus
Dere\GG16395-PA 1097 GG16395-PA 736..1003 1057..1317 587 42.2 Plus
Dere\GG23459-PA 781 GG23459-PA 346..765 899..1307 579 33.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18554-PA 1353 GH18554-PA 1..1352 1..1324 5490 80.5 Plus
Dgri\GH16452-PA 1676 GH16452-PA 250..627 955..1318 632 35.4 Plus
Dgri\GH12950-PA 553 GH12950-PA 152..531 949..1308 594 37.1 Plus
Dgri\GH15800-PA 553 GH15800-PA 152..531 949..1308 594 37.1 Plus
Dgri\GH10183-PA 787 GH10183-PA 352..771 899..1307 594 33.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:36
Subject Length Description Subject Range Query Range Score Percent Strand
FER-PA 1325 CG8874-PA 1..1325 1..1325 6881 100 Plus
FER-PE 871 CG8874-PE 1..500 1..500 2533 98.8 Plus
FER-PF 872 CG8874-PF 1..501 1..500 2521 98.6 Plus
FER-PB 804 CG8874-PB 1..433 1..433 2199 99.1 Plus
FER-PD 393 CG8874-PD 1..393 933..1325 2088 100 Plus
FER-PE 871 CG8874-PE 492..871 946..1325 2012 100 Plus
FER-PF 872 CG8874-PF 493..872 946..1325 2012 100 Plus
FER-PB 804 CG8874-PB 426..804 947..1325 2008 100 Plus
FER-PC 475 CG8874-PC 97..475 947..1325 2008 100 Plus
Abl-PH 1504 CG4032-PH 249..623 955..1315 579 35.3 Plus
Abl-PG 1522 CG4032-PG 267..641 955..1315 579 35.3 Plus
Abl-PE 1589 CG4032-PE 249..623 955..1315 579 35.3 Plus
Abl-PD 1607 CG4032-PD 267..641 955..1315 579 35.3 Plus
Abl-PJ 1620 CG4032-PJ 249..623 955..1315 579 35.3 Plus
Abl-PA 1620 CG4032-PA 249..623 955..1315 579 35.3 Plus
Abl-PB 1638 CG4032-PB 267..641 955..1315 579 35.3 Plus
Abl-PI 1666 CG4032-PI 267..641 955..1315 579 35.3 Plus
Abl-PC 1705 CG4032-PC 249..623 955..1315 579 35.3 Plus
Abl-PF 1723 CG4032-PF 267..641 955..1315 579 35.3 Plus
Src64B-PD 552 CG7524-PD 151..530 949..1308 576 36.9 Plus
Src64B-PC 552 CG7524-PC 151..530 949..1308 576 36.9 Plus
Src64B-PI 552 CG7524-PI 151..530 949..1308 576 36.9 Plus
Src64B-PH 552 CG7524-PH 151..530 949..1308 576 36.9 Plus
Src64B-PF 552 CG7524-PF 151..530 949..1308 576 36.9 Plus
Src64B-PJ 552 CG7524-PJ 151..530 949..1308 576 36.9 Plus
Src64B-PB 552 CG7524-PB 151..530 949..1308 576 36.9 Plus
Src64B-PE 552 CG7524-PE 151..530 949..1308 576 36.9 Plus
Src64B-PK 553 CG7524-PK 151..531 949..1308 574 37.1 Plus
Src42A-PB 1597 CG44128-PB 1205..1576 955..1310 557 35.1 Plus
Btk29A-PH 464 CG8049-PH 29..448 899..1307 555 33.3 Plus
Btk29A-PG 565 CG8049-PG 130..549 899..1307 555 33.3 Plus
Btk29A-PF 603 CG8049-PF 168..587 899..1307 555 33.3 Plus
Btk29A-PA 603 CG8049-PA 168..587 899..1307 555 33.3 Plus
Btk29A-PC 603 CG8049-PC 168..587 899..1307 555 33.3 Plus
Btk29A-PE 786 CG8049-PE 351..770 899..1307 555 33.3 Plus
Btk29A-PD 786 CG8049-PD 351..770 899..1307 555 33.3 Plus
Btk29A-PB 786 CG8049-PB 351..770 899..1307 555 33.3 Plus
Eph-PF 1005 CG1511-PF 702..969 1057..1317 554 42.2 Plus
Eph-PB 1047 CG1511-PB 686..953 1057..1317 554 42.2 Plus
Eph-PE 1080 CG1511-PE 719..986 1057..1317 554 42.2 Plus
Eph-PD 1080 CG1511-PD 735..1002 1057..1317 554 42.2 Plus
Eph-PA 1080 CG1511-PA 719..986 1057..1317 554 42.2 Plus
Eph-PC 1096 CG1511-PC 735..1002 1057..1317 554 42.2 Plus
Src42A-PA 517 CG44128-PA 128..496 958..1310 553 35.1 Plus
Alk-PB 1701 CG8250-PB 1187..1453 1057..1307 537 41.6 Plus
Alk-PA 1701 CG8250-PA 1187..1453 1057..1307 537 41.6 Plus
FER-PC 475 CG8874-PC 1..104 330..433 520 96.2 Plus
Csk-PK 723 CG42317-PK 355..711 960..1310 519 35.4 Plus
Csk-PI 723 CG42317-PI 355..711 960..1310 519 35.4 Plus
Csk-PJ 723 CG42317-PJ 355..711 960..1310 519 35.4 Plus
Csk-PF 723 CG17309-PE 355..711 960..1310 519 35.4 Plus
Csk-PH 805 CG42317-PH 437..793 960..1310 519 35.4 Plus
Csk-PL 1052 CG42317-PL 684..1040 960..1310 519 35.4 Plus
Csk-PG 1052 CG42317-PG 684..1040 960..1310 519 35.4 Plus
Fak-PF 1198 CG10023-PF 491..741 1070..1319 495 38.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:33:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23604-PA 1343 GI23604-PA 1..1343 1..1325 5478 79 Plus
Dmoj\GI16710-PA 1591 GI16710-PA 248..625 955..1318 630 35.4 Plus
Dmoj\GI12582-PA 557 GI12582-PA 156..535 949..1308 598 37.4 Plus
Dmoj\GI14244-PA 794 GI14244-PA 359..778 899..1307 598 33.7 Plus
Dmoj\GI14095-PA 1083 GI14095-PA 721..988 1057..1317 589 42.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:33:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13676-PA 1301 GL13676-PA 1..1301 1..1325 5481 82.7 Plus
Dper\GL17941-PA 551 GL17941-PA 150..529 949..1308 590 37.1 Plus
Dper\GL18177-PA 1097 GL18177-PA 736..1003 1057..1317 588 42.2 Plus
Dper\GL19386-PA 797 GL19386-PA 363..781 899..1307 583 33.6 Plus
Dper\GL16696-PA 516 GL16696-PA 127..495 958..1310 566 36 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21383-PA 1334 GA21383-PA 1..1334 1..1325 5685 85.3 Plus
Dpse\GA21383-PB 296 GA21383-PB 1..296 1030..1325 1599 97.3 Plus
Dpse\GA17894-PA 1713 GA17894-PA 257..634 955..1318 631 35.4 Plus
Dpse\GA28338-PA 551 GA28338-PA 150..529 949..1308 590 37.1 Plus
Dpse\GA24271-PA 516 GA24271-PA 127..495 958..1310 566 36 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26266-PA 1329 GM26266-PA 1..1329 1..1325 7063 98.4 Plus
Dsec\GM24379-PA 1617 GM24379-PA 249..626 955..1318 632 35.4 Plus
Dsec\Src64B-PA 552 GM13963-PA 151..530 949..1308 592 37.1 Plus
Dsec\GM13100-PA 785 GM13100-PA 350..769 899..1307 578 33.3 Plus
Dsec\GM26804-PA 517 GM26804-PA 151..423 1057..1317 573 41.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20803-PA 1214 GD20803-PA 13..1214 129..1325 6358 98.2 Plus
Dsim\GD15116-PA 139 GD15116-PA 1..130 1..130 681 98.5 Plus
Dsim\Src64B-PA 552 GD13245-PA 151..530 949..1308 592 37.1 Plus
Dsim\GD10390-PA 517 GD10390-PA 128..496 958..1310 562 36 Plus
Dsim\GD20649-PA 804 GD20649-PA 436..792 960..1310 541 35.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23577-PA 1333 GJ23577-PA 1..1333 1..1325 5473 81 Plus
Dvir\GJ12453-PA 1688 GJ12453-PA 268..645 955..1318 632 35.4 Plus
Dvir\GJ15487-PA 554 GJ15487-PA 153..532 949..1308 601 37.6 Plus
Dvir\GJ20581-PA 784 GJ20581-PA 349..768 899..1307 597 33.7 Plus
Dvir\GJ14241-PA 1051 GJ14241-PA 690..957 1057..1317 588 42.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11727-PA 1342 GK11727-PA 1..1342 1..1325 5450 80.5 Plus
Dwil\GK17605-PA 552 GK17605-PA 151..530 949..1308 590 36.9 Plus
Dwil\GK13696-PA 1034 GK13696-PA 673..940 1057..1317 582 41.9 Plus
Dwil\GK23856-PA 786 GK23856-PA 351..770 899..1307 575 33 Plus
Dwil\GK21551-PA 518 GK21551-PA 129..497 958..1310 567 36 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24784-PA 1332 GE24784-PA 1..1332 1..1325 6878 96.3 Plus
Dyak\GE22200-PA 1616 GE22200-PA 248..625 955..1318 633 35.4 Plus
Dyak\GE20600-PA 552 GE20600-PA 151..530 949..1308 592 37.1 Plus
Dyak\GE14555-PA 1035 GE14555-PA 674..941 1057..1317 587 42.2 Plus
Dyak\GE11074-PA 782 GE11074-PA 347..766 899..1307 578 33.3 Plus

RH14840.hyp Sequence

Translation from 340 to 4317

> RH14840.hyp
MGFSSALQSRAAHEALIVRQDAELRLMETMKRSIQMKAKCDKEYAISLTA
VAQQGLKIDRADEMQGSLISKSWRSYMDELDHQAKQFKFNAEQLEVVCDK
LTHLSQDKRKARKAYQEEHAKIAARLNHLTDEVVRKKSEYQKHLEGYKAL
RTRFEENYIKAPSRSGRKLDDVRDKYQKACRKLHLTHNEYVLSITEAIEV
EKDFRNVLLPGLLEHQQSVQESFILLWRNILQEAAQYGDLTADKYKEIQK
RIDTVIGSINPTEEYGEFTEKYKTSPTTPLLFQFDETLIQDIPGKLQSST
LTVDNLTVDWLRNRLQELEGAVRDCQEKQMKMIEHVNGGSPVANGSIISN
GSNTSNGIQSNKDSLCRQSKDLNALRCQEKQKQKLVDMIKCALNEVGCEE
LPSGCDDDLTLEQNFIENGYNNEQQRSNSTSSPGLGIMNELMRRGGVLTL
LRGRGRHFKRKSTPQPATPMTRSRQGRFNKLQPRSQSLGSLSVIRDGNGP
SPARYEPITNHRLRQAASVHYLGEEIATSSTNPPDLTRLRRTQCSMLCLG
EDEEPVVLASPAPLTQLTAAVLTNTNNNHIYADLELDKKKDTSPSPECKG
EQIQPKKEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRLKRTLQPSDD
VNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTSHSKKRSLS
FSQKSISNIFSNLKEFSKSPLVRMGKNHILNEEQDAKRTQPSQHHHSSGS
DCPTNSSSSSSNNNNNNKNTSSNSNHSASQSTIITSTITTTITTTTTTTP
SKENSRLKFKVPKIQKKSKAIRNTFRSKLLNFQLKRSKPCKQCTKRRRIH
PSKSVFDFAKEFEVEQPAGSAADEQFCNCPPAGQKPVKPSVQISGHKDHP
FESSSGELDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLAASISLS
TNRPLYEEEWFHGVLPREEVVRLLNNDGDFLVRETIRNEESQIVLSVCWN
GHKHFIVQTTGEGNFRFEGPPFASIQELIMHQYHSELPVTVKSGAILRRP
VCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLPD
EQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYL
RKNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVK
ISDFGMSREEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILM
WEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAAD
AESRPHFDEIYNVVDALILRLDNSH*

RH14840.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
FER-PA 1325 CG8874-PA 1..1325 1..1325 6881 100 Plus
FER-PE 871 CG8874-PE 1..500 1..500 2533 98.8 Plus
FER-PF 872 CG8874-PF 1..501 1..500 2521 98.6 Plus
FER-PB 804 CG8874-PB 1..433 1..433 2199 99.1 Plus
FER-PD 393 CG8874-PD 1..393 933..1325 2088 100 Plus
FER-PE 871 CG8874-PE 492..871 946..1325 2012 100 Plus
FER-PF 872 CG8874-PF 493..872 946..1325 2012 100 Plus
FER-PB 804 CG8874-PB 426..804 947..1325 2008 100 Plus