BDGP Sequence Production Resources |
Search the DGRC for RH17222
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 172 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15083-RA |
Protein status: | RH17222.pep: gold |
Preliminary Size: | 453 |
Sequenced Size: | 687 |
Gene | Date | Evidence |
---|---|---|
CG15083 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15083 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15083 | 2003-08-11 | Blastp of sequenced clone |
CG15083 | 2008-04-29 | Release 5.5 accounting |
CG15083 | 2008-08-15 | Release 5.9 accounting |
CG15083 | 2008-12-18 | 5.12 accounting |
687 bp (687 high quality bases) assembled on 2003-08-11
GenBank Submission: AY071700
> RH17222.complete GCCACTTATTATTTGATTCTTGCCCAGTGCGGTTGTGTTTCCGTGCGCTA GGTGTTCCCAAACCGGTTTAAGTGCCATACTAGCCATATTTGTATTTGGA AAATTCGCTGTAAACCACAGAGTTTCAAAATGAAAATCGATCTGACGGTG GAAAATGGCCCGTGCAATACCGATTTGCGGAGCTGGTGCCTGGGAATCGC GATCTATTGGCTATTGAGCATGACTTTCAACGTTATATTCGCTCCAAACG TTCTTACCTTTATTGGATTTGCCATCGTAGTAGTCGCCAATATTTGCTTA TTGATAGGAACCCTGAAGGAAAAGCCAATTCTGGTGTTCGTCTGGCTGAT CTTCGCTGCCATTGAAGCCATCTCCTTTCCGTTTGCCGTCTTCGGGGTTA TCTTCCACTACGGAGGATATCGCGAGGCTACCGGAATGAACAACGTTTTC GGTGCCCTGCTCGTTTACATCATCACATTTCTATTGATCCTCTTCAGCGC ACGAATTGTGTACTCCTTCTACCTCCAGCTGAAAAACAGCGAAGCCAGCA AACAAACACCGCGCGCCATGAATGTGGTTTAGTCCTTATCATTCTACACT ACATAAATTGTCGGGGAAGAGCCCACCGTTCGTTCATCTCAGTGTTTGCA ATAAAATGCTTTGTTTTTTACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14722388..14722636 | 2..250 | 1230 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 14723783..14723971 | 482..670 | 900 | 98.4 | Plus |
chr2R | 21145070 | chr2R | 14723542..14723706 | 317..481 | 795 | 98.8 | Plus |
chr2R | 21145070 | chr2R | 14723407..14723480 | 250..323 | 355 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18835265..18835512 | 3..250 | 1240 | 100 | Plus |
2R | 25286936 | 2R | 18836655..18836843 | 482..670 | 945 | 100 | Plus |
2R | 25286936 | 2R | 18836414..18836578 | 317..481 | 825 | 100 | Plus |
2R | 25286936 | 2R | 18836279..18836352 | 250..323 | 355 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18836464..18836711 | 3..250 | 1240 | 100 | Plus |
2R | 25260384 | 2R | 18837854..18838042 | 482..670 | 945 | 100 | Plus |
2R | 25260384 | 2R | 18837613..18837777 | 317..481 | 825 | 100 | Plus |
2R | 25260384 | 2R | 18837478..18837551 | 250..323 | 355 | 98.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14723783..14723971 | 482..671 | 97 | Plus | |
chr2R | 14723408..14723475 | 251..318 | 100 | -> | Plus |
chr2R | 14723544..14723706 | 319..481 | 98 | -> | Plus |
chr2R | 14722387..14722636 | 1..250 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..453 | 130..582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..453 | 130..582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..453 | 130..582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..453 | 130..582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..453 | 130..582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..671 | 1..669 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..667 | 3..669 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..669 | 2..669 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..671 | 1..669 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15083-RA | 1..669 | 2..669 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18835261..18835512 | 1..250 | 99 | -> | Plus |
2R | 18836280..18836347 | 251..318 | 100 | -> | Plus |
2R | 18836416..18836578 | 319..481 | 100 | -> | Plus |
2R | 18836655..18836843 | 482..671 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18835261..18835512 | 1..250 | 99 | -> | Plus |
2R | 18836280..18836347 | 251..318 | 100 | -> | Plus |
2R | 18836416..18836578 | 319..481 | 100 | -> | Plus |
2R | 18836655..18836843 | 482..671 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18835261..18835512 | 1..250 | 99 | -> | Plus |
2R | 18836280..18836347 | 251..318 | 100 | -> | Plus |
2R | 18836416..18836578 | 319..481 | 100 | -> | Plus |
2R | 18836655..18836843 | 482..671 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14722766..14723017 | 1..250 | 99 | -> | Plus |
arm_2R | 14723785..14723852 | 251..318 | 100 | -> | Plus |
arm_2R | 14723921..14724083 | 319..481 | 100 | -> | Plus |
arm_2R | 14724160..14724348 | 482..671 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18836460..18836711 | 1..250 | 99 | -> | Plus |
2R | 18837479..18837546 | 251..318 | 100 | -> | Plus |
2R | 18837615..18837777 | 319..481 | 100 | -> | Plus |
2R | 18837854..18838042 | 482..671 | 99 | Plus |
Translation from 129 to 581
> RH17222.pep MKIDLTVENGPCNTDLRSWCLGIAIYWLLSMTFNVIFAPNVLTFIGFAIV VVANICLLIGTLKEKPILVFVWLIFAAIEAISFPFAVFGVIFHYGGYREA TGMNNVFGALLVYIITFLLILFSARIVYSFYLQLKNSEASKQTPRAMNVV *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11121-PA | 148 | GF11121-PA | 1..148 | 1..150 | 543 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21931-PA | 150 | GG21931-PA | 1..150 | 1..150 | 644 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22129-PA | 147 | GH22129-PA | 1..142 | 1..142 | 484 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15083-PA | 150 | CG15083-PA | 1..150 | 1..150 | 769 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19357-PA | 147 | GI19357-PA | 1..142 | 1..142 | 490 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11234-PA | 147 | GL11234-PA | 1..147 | 1..150 | 518 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13477-PA | 147 | GA13477-PA | 1..147 | 1..150 | 518 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21921-PA | 150 | GM21921-PA | 1..150 | 1..150 | 727 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11415-PA | 150 | GD11415-PA | 1..150 | 1..150 | 727 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20341-PA | 148 | GJ20341-PA | 1..141 | 1..141 | 485 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20929-PA | 147 | GK20929-PA | 1..147 | 1..150 | 394 | 54 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12004-PA | 150 | GE12004-PA | 1..150 | 1..150 | 668 | 83.3 | Plus |
Translation from 129 to 581
> RH17222.hyp MKIDLTVENGPCNTDLRSWCLGIAIYWLLSMTFNVIFAPNVLTFIGFAIV VVANICLLIGTLKEKPILVFVWLIFAAIEAISFPFAVFGVIFHYGGYREA TGMNNVFGALLVYIITFLLILFSARIVYSFYLQLKNSEASKQTPRAMNVV *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15083-PA | 150 | CG15083-PA | 1..150 | 1..150 | 769 | 100 | Plus |