Clone RH17413 Report

Search the DGRC for RH17413

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:174
Well:13
Vector:pFlc-1
Associated Gene/TranscriptGbeta5-RA
Protein status:RH17413.pep: gold
Preliminary Size:1077
Sequenced Size:1564

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10763 2002-01-01 Sim4 clustering to Release 2
CG10763 2003-01-01 Sim4 clustering to Release 3
CG10763 2003-02-21 Blastp of sequenced clone
Gbeta5 2008-04-29 Release 5.5 accounting
Gbeta5 2008-08-15 Release 5.9 accounting
Gbeta5 2008-12-18 5.12 accounting

Clone Sequence Records

RH17413.complete Sequence

1564 bp (1564 high quality bases) assembled on 2003-02-21

GenBank Submission: BT004841

> RH17413.complete
GAGGTATTCGGATTTTCGTATTCGAGTATACACTTTTTTTCGGATTGATT
TTTCGCTGTCCAATTGGAGAAGTTCGAACGGGATAGGACACACAATCCCC
GAGAGATATCCATAGAAGCGCCATCTCAGAGCAACCATGTCGGAGGCGGC
GGTGCCAGCGAGCAATGCGAACGCGAATGCCACTGAAAAGATGGCCAGTT
TGGTGCGAGAGGCGGAGAATTTGAAGACCAAACTGGAGGAGGAGCGCCAG
AAGCTGAACGACGTCAATCTGTCGAACATCGCAGAGCGGCTGGAGCAGAT
CGCCTATGTGAACATCAAGCCGCGTAAGGTGCTCAAGGGCCACCAGGCGA
AGGTCCTGTGCACCGACTGGAGTCCCGACAAGCGTCACATCATCTCCTCG
TCGCAGGACGGACGTCTGATCATCTGGGATGCGTTCACCACGAACAAGGA
GCACGCCGTCACCATGCCCACCACCTGGATTATGGCCTGTGCCTACGCGC
CGTCGGGCAATTTTGTGGCCTGCGGCGGACTAGACAATAAGGTCACCGTG
TATCCGATAACCTCCGATGAGGAGATGGCCGCCAAGAAGCGCACAGTGGG
CACCCACACCAGCTACATGTCGTGCTGCATCTATCCGAATTCCGATCAGC
AAATCCTCACGGGCAGTGGCGATTCCACATGCGCTTTGTGGGACGTGGAA
TCGGGCCAGCTACTGCAAAGCTTCCACGGACATTCCGGCGATGTAATGGC
CATCGATTTGGCTCCCAACGAAACGGGCAACACCTTTGTCTCGGGCAGTT
GCGATCGCATGGCCTTCATCTGGGACATGCGCTCTGGTCATGTCGTTCAG
TCCTTCGAGGGTCATCAATCGGATGTGAATAGCGTTAAGTTCCATCCTTG
CGGAGATGCCATAGCCACTGGATCGGATGACAGCAGCTGCCGGCTGTACG
ATATGCGAGCGGATCGCGAGGTGGCCGTGTTCGCCAAGGAGAGCATCATC
TTTGGCGTCAATTCGGTGGACTTTTCGGTCAGTGGAAGATTACTGTTTGC
TGGCTACAACGATTACACCGTCAACTTGTGGGACACGCTGAAATCGGAAA
GGGTCTGCCTGCTGTACGGGCACGAGAACAAGGTGTCCTGCGTCCAGGTC
TCGCCCGATGGCACCGCTCTATCCACCGGCAGTTGGGACTACACCATACG
GGTGTGGGCCTAAGCCATGTGGCACCTTATTGTTGGGGGATGCATTTGTC
CAGGACAGATGCCGTCTCGCTTTGTTTTCCCTCTCTTCTGATTTGTTTTT
TTTTTTTTTTTTTTGTGTTGTGCATCGCATCTCTAGGATAGTTAAGTTAC
GGATTCGGTGATCCCCCAAGTGTGTACATATGTCTCATGTCGGGATTGCC
AGCATGGATGTCTTGGTTACCGCAGTGTTATGCTTACTACCAGCTGCTGT
ACCAAATTGAATCTAAATATATACGTGTATATGCATCCAAGTGTAACCAA
TATGCGACTAGTTATAAGTTCCTGTTCGAAATAAATGTTGAGCTATAGAC
AAAAAAAAAAAAAA

RH17413.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta5-RA 1548 Gbeta5-RA 3..1548 4..1550 7680 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8042567..8044112 1550..4 7640 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:23:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8150728..8152276 1553..4 7685 99.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 8158826..8160374 1553..4 7695 99.8 Minus
Blast to na_te.dros performed on 2019-03-15 22:53:22 has no hits.

RH17413.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:54:02 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8042567..8044114 1..1550 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:42:33 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1077 137..1213 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:49:32 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1077 137..1213 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:35:43 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1077 137..1213 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:40:54 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1077 137..1213 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:37:45 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1077 137..1213 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:02:17 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1548 3..1550 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:49:31 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1548 3..1550 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:35:43 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1545 5..1550 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:40:54 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1548 3..1550 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:37:45 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta5-RA 1..1545 5..1550 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:54:02 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
X 8150731..8152278 1..1550 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:54:02 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
X 8150731..8152278 1..1550 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:54:02 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
X 8150731..8152278 1..1550 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:35:43 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8044764..8046311 1..1550 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:11:20 Download gff for RH17413.complete
Subject Subject Range Query Range Percent Splice Strand
X 8158829..8160376 1..1550 99   Minus

RH17413.pep Sequence

Translation from 136 to 1212

> RH17413.pep
MSEAAVPASNANANATEKMASLVREAENLKTKLEEERQKLNDVNLSNIAE
RLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAF
TTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAK
KRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHS
GDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSV
KFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSG
RLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSW
DYTIRVWA*

RH17413.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:40:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20976-PA 358 GF20976-PA 1..358 1..358 1912 98.3 Plus
Dana\GF20505-PA 340 GF20505-PA 3..339 18..357 944 49.4 Plus
Dana\GF23715-PA 346 GF23715-PA 11..345 22..357 634 35.2 Plus
Dana\GF22217-PA 361 GF22217-PA 56..357 58..357 290 26.6 Plus
Dana\GF10412-PA 403 GF10412-PA 14..297 66..357 283 25 Plus
Dana\GF10412-PA 403 GF10412-PA 9..193 149..339 182 28.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:40:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17982-PA 358 GG17982-PA 1..358 1..358 1938 100 Plus
Dere\GG17923-PA 340 GG17923-PA 3..339 18..357 945 49.4 Plus
Dere\GG16054-PA 346 GG16054-PA 11..345 22..357 634 35.5 Plus
Dere\GG12938-PA 361 GG12938-PA 58..357 60..357 287 26.8 Plus
Dere\GG13777-PA 390 GG13777-PA 14..297 66..357 274 24.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24861-PA 357 GH24861-PA 1..357 1..358 1880 97.2 Plus
Dgri\GH12882-PA 340 GH12882-PA 3..339 18..357 944 49.4 Plus
Dgri\GH16945-PA 347 GH16945-PA 11..346 21..357 640 36.3 Plus
Dgri\GH24921-PA 357 GH24921-PA 52..353 58..357 292 26.9 Plus
Dgri\GH11222-PA 766 GH11222-PA 415..721 64..358 280 26.2 Plus
Dgri\GH11222-PA 766 GH11222-PA 513..740 66..291 160 21.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:44
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta5-PA 358 CG10763-PA 1..358 1..358 1894 100 Plus
Gbeta13F-PH 340 CG10545-PH 3..339 18..357 932 49.4 Plus
Gbeta13F-PG 340 CG10545-PG 3..339 18..357 932 49.4 Plus
Gbeta13F-PF 340 CG10545-PF 3..339 18..357 932 49.4 Plus
Gbeta13F-PE 340 CG10545-PE 3..339 18..357 932 49.4 Plus
Gbeta13F-PC 340 CG10545-PC 3..339 18..357 932 49.4 Plus
Gbeta13F-PA 340 CG10545-PA 3..339 18..357 932 49.4 Plus
Gbeta76C-PA 346 CG8770-PA 11..345 22..357 638 35.5 Plus
wds-PB 361 CG17437-PB 56..357 58..357 296 26.3 Plus
wds-PA 361 CG17437-PA 56..357 58..357 296 26.3 Plus
ebi-PA 700 CG4063-PA 349..655 64..358 294 25.6 Plus
Poc1-PA 391 CG10191-PA 16..297 68..357 280 24.8 Plus
Poc1-PB 403 CG10191-PB 16..297 68..357 280 24.8 Plus
Taf5-PA 704 CG7704-PA 436..645 144..357 277 31.3 Plus
Nle-PA 488 CG2863-PA 72..402 27..357 269 24.7 Plus
ago-PA 1326 CG15010-PA 986..1180 150..357 269 31.7 Plus
ago-PB 1326 CG15010-PB 986..1180 150..357 269 31.7 Plus
ago-PC 1326 CG15010-PC 986..1180 150..357 269 31.7 Plus
U4-U6-60K-PA 553 CG6322-PA 220..550 30..358 267 24.6 Plus
CG7568-PD 467 CG7568-PD 197..424 127..357 266 31.4 Plus
CG7568-PE 482 CG7568-PE 197..424 127..357 266 31.4 Plus
CG7568-PD 467 CG7568-PD 197..466 85..357 262 28.3 Plus
CG7568-PE 482 CG7568-PE 197..466 85..357 262 28.3 Plus
Nle-PA 488 CG2863-PA 153..487 62..358 250 25.4 Plus
CG10931-PA 345 CG10931-PA 52..340 66..357 243 24.6 Plus
Tango4-PA 482 CG1796-PA 166..366 152..357 241 29.1 Plus
CG3436-PC 347 CG3436-PC 47..340 62..354 238 23.9 Plus
CG3436-PA 347 CG3436-PA 47..340 62..354 238 23.9 Plus
CG3909-PA 331 CG3909-PA 52..323 82..357 232 25.5 Plus
CG3909-PA 331 CG3909-PA 75..323 60..271 228 25.5 Plus
CG7568-PD 467 CG7568-PD 126..336 166..357 220 28.2 Plus
CG7568-PE 482 CG7568-PE 126..336 166..357 220 28.2 Plus
CG7568-PD 467 CG7568-PD 263..466 66..271 219 27.6 Plus
CG7568-PE 482 CG7568-PE 263..466 66..271 219 27.6 Plus
Wdr33-PB 807 CG1109-PB 183..429 65..315 219 24.5 Plus
Wdr33-PA 807 CG1109-PA 183..429 65..315 219 24.5 Plus
kat80-PC 818 CG13956-PC 29..251 123..349 218 26.2 Plus
kat80-PA 819 CG13956-PA 29..251 123..349 218 26.2 Plus
kat80-PB 819 CG13956-PB 29..251 123..349 218 26.2 Plus
Wdr33-PB 807 CG1109-PB 154..429 78..357 217 24.3 Plus
Wdr33-PA 807 CG1109-PA 154..429 78..357 217 24.3 Plus
CG3436-PC 347 CG3436-PC 68..251 172..357 216 31.7 Plus
CG3436-PA 347 CG3436-PA 68..251 172..357 216 31.7 Plus
Lis-1-PG 411 CG8440-PG 136..366 144..357 216 26.6 Plus
Lis-1-PF 411 CG8440-PF 136..366 144..357 216 26.6 Plus
Lis-1-PB 411 CG8440-PB 136..366 144..357 216 26.6 Plus
Lis-1-PA 411 CG8440-PA 136..366 144..357 216 26.6 Plus
CG12325-PB 949 CG12325-PB 390..600 67..279 216 26 Plus
CG12325-PA 949 CG12325-PA 390..600 67..279 216 26 Plus
can-PA 942 CG6577-PA 549..821 109..357 214 23.5 Plus
Taf5-PA 704 CG7704-PA 414..699 23..325 213 23.1 Plus
CG3436-PC 347 CG3436-PC 94..342 66..314 212 24.3 Plus
CG3436-PA 347 CG3436-PA 94..342 66..314 212 24.3 Plus
Rack1-PC 318 CG7111-PC 56..311 62..315 212 23.5 Plus
Rack1-PD 318 CG7111-PD 56..311 62..315 212 23.5 Plus
Rack1-PA 318 CG7111-PA 56..311 62..315 212 23.5 Plus
wda-PA 743 CG4448-PA 516..692 177..357 210 29.8 Plus
Lis-1-PG 411 CG8440-PG 104..408 66..357 208 21.2 Plus
Lis-1-PF 411 CG8440-PF 104..408 66..357 208 21.2 Plus
Lis-1-PB 411 CG8440-PB 104..408 66..357 208 21.2 Plus
Lis-1-PA 411 CG8440-PA 104..408 66..357 208 21.2 Plus
Rack1-PC 318 CG7111-PC 8..311 63..357 208 25.5 Plus
Rack1-PD 318 CG7111-PD 8..311 63..357 208 25.5 Plus
Rack1-PA 318 CG7111-PA 8..311 63..357 208 25.5 Plus
Smu1-PC 509 CG5451-PC 207..507 63..357 204 23 Plus
Smu1-PB 509 CG5451-PB 207..507 63..357 204 23 Plus
Smu1-PA 509 CG5451-PA 207..507 63..357 204 23 Plus
Bub3-PB 326 CG7581-PB 27..294 83..348 203 23.3 Plus
Bub3-PA 326 CG7581-PA 27..294 83..348 203 23.3 Plus
CG10931-PA 345 CG10931-PA 47..251 149..357 199 27.6 Plus
can-PA 942 CG6577-PA 619..822 63..272 197 23.3 Plus
slmb-PC 510 CG3412-PC 220..398 170..357 195 27.6 Plus
slmb-PA 510 CG3412-PA 220..398 170..357 195 27.6 Plus
slmb-PB 597 CG3412-PB 220..398 170..357 195 27.6 Plus
CG30116-PB 1698 CG30116-PB 1293..1491 67..274 194 27.3 Plus
slmb-PC 510 CG3412-PC 244..442 64..275 193 25.5 Plus
slmb-PA 510 CG3412-PA 244..442 64..275 193 25.5 Plus
slmb-PB 597 CG3412-PB 244..442 64..275 193 25.5 Plus
wda-PA 743 CG4448-PA 552..696 171..319 191 29.5 Plus
CG30116-PB 1698 CG30116-PB 1100..1403 61..357 191 22.6 Plus
kat80-PC 818 CG13956-PC 6..216 146..357 189 23.6 Plus
kat80-PA 819 CG13956-PA 6..216 146..357 189 23.6 Plus
kat80-PB 819 CG13956-PB 6..216 146..357 189 23.6 Plus
CG12325-PB 949 CG12325-PB 377..550 184..357 184 27.5 Plus
CG12325-PA 949 CG12325-PA 377..550 184..357 184 27.5 Plus
slmb-PC 510 CG3412-PC 215..438 118..357 182 26.6 Plus
slmb-PA 510 CG3412-PA 215..438 118..357 182 26.6 Plus
slmb-PB 597 CG3412-PB 215..438 118..357 182 26.6 Plus
CG30116-PB 1698 CG30116-PB 1249..1488 153..357 179 24.2 Plus
ago-PA 1326 CG15010-PA 1071..1266 66..274 175 25 Plus
ago-PB 1326 CG15010-PB 1071..1266 66..274 175 25 Plus
ago-PC 1326 CG15010-PC 1071..1266 66..274 175 25 Plus
Lis-1-PG 411 CG8440-PG 103..262 195..357 172 30.1 Plus
Lis-1-PF 411 CG8440-PF 103..262 195..357 172 30.1 Plus
Lis-1-PB 411 CG8440-PB 103..262 195..357 172 30.1 Plus
Lis-1-PA 411 CG8440-PA 103..262 195..357 172 30.1 Plus
kat80-PC 818 CG13956-PC 4..307 62..354 168 21.4 Plus
kat80-PA 819 CG13956-PA 4..307 62..354 168 21.4 Plus
kat80-PB 819 CG13956-PB 4..307 62..354 168 21.4 Plus
ebi-PA 700 CG4063-PA 450..699 69..319 166 21.3 Plus
Lis-1-PG 411 CG8440-PG 187..411 64..274 166 22.1 Plus
Lis-1-PF 411 CG8440-PF 187..411 64..274 166 22.1 Plus
Lis-1-PB 411 CG8440-PB 187..411 64..274 166 22.1 Plus
Lis-1-PA 411 CG8440-PA 187..411 64..274 166 22.1 Plus
Tango4-PA 482 CG1796-PA 210..457 66..315 163 24.2 Plus
CG30116-PB 1698 CG30116-PB 934..1144 65..279 160 21.5 Plus
Tango4-PA 482 CG1796-PA 101..362 10..266 157 21.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14411-PA 356 GI14411-PA 1..356 1..358 1861 96.1 Plus
Dmoj\GI14221-PA 340 GI14221-PA 3..339 18..357 944 49.4 Plus
Dmoj\GI11805-PA 346 GI11805-PA 11..345 22..357 634 34.9 Plus
Dmoj\GI21774-PA 358 GI21774-PA 53..354 58..357 289 26.6 Plus
Dmoj\GI24459-PA 445 GI24459-PA 155..444 63..357 282 30.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:40:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20190-PA 356 GL20190-PA 1..356 1..358 1883 97.5 Plus
Dper\GL20952-PA 346 GL20952-PA 10..345 21..357 646 36 Plus
Dper\GL18448-PA 278 GL18448-PA 3..277 18..357 497 33.2 Plus
Dper\GL13093-PA 356 GL13093-PA 53..352 60..357 287 26.5 Plus
Dper\GL21559-PA 413 GL21559-PA 14..297 66..357 282 25.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:40:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10552-PA 356 GA10552-PA 1..356 1..358 1883 97.5 Plus
Dpse\GA23154-PA 340 GA23154-PA 3..339 18..357 938 49.1 Plus
Dpse\GA21307-PA 346 GA21307-PA 10..345 21..357 646 36 Plus
Dpse\GA14510-PA 356 GA14510-PA 53..352 60..357 287 26.5 Plus
Dpse\GA10144-PA 413 GA10144-PA 14..297 66..357 280 25.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:40:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11205-PA 358 GM11205-PA 1..358 1..358 1938 100 Plus
Dsec\GM22591-PA 324 GM22591-PA 3..323 18..357 849 46.5 Plus
Dsec\GM19633-PA 346 GM19633-PA 11..345 22..357 634 35.5 Plus
Dsec\GM19230-PA 361 GM19230-PA 58..357 60..357 287 26.8 Plus
Dsec\GM12236-PA 446 GM12236-PA 89..403 45..357 275 28.3 Plus
Dsec\GM12236-PA 446 GM12236-PA 74..445 7..357 262 26.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16125-PA 358 GD16125-PA 1..358 1..358 1938 100 Plus
Dsim\GD17247-PA 340 GD17247-PA 3..339 18..357 945 49.4 Plus
Dsim\GD14823-PA 346 GD14823-PA 11..345 22..357 634 35.5 Plus
Dsim\GD16610-PA 361 GD16610-PA 58..357 60..357 287 26.8 Plus
Dsim\GD17720-PA 446 GD17720-PA 89..403 45..357 275 28.3 Plus
Dsim\GD17720-PA 446 GD17720-PA 74..445 7..357 262 26.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18759-PA 356 GJ18759-PA 1..356 1..358 1868 96.4 Plus
Dvir\GJ14659-PA 340 GJ14659-PA 3..339 18..357 944 49.4 Plus
Dvir\GJ13508-PA 346 GJ13508-PA 11..345 22..357 632 35.2 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 53..354 58..357 290 26.6 Plus
Dvir\GJ22241-PA 373 GJ22241-PA 70..362 63..357 279 27.3 Plus
Dvir\GJ22241-PA 373 GJ22241-PA 68..230 191..357 189 27.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19916-PA 356 GK19916-PA 1..356 1..358 1893 97.8 Plus
Dwil\GK15234-PA 340 GK15234-PA 3..339 18..357 944 49.4 Plus
Dwil\GK13039-PA 346 GK13039-PA 11..345 22..357 628 34.9 Plus
Dwil\GK19997-PA 358 GK19997-PA 53..354 58..357 290 26.6 Plus
Dwil\GK10412-PA 414 GK10412-PA 14..297 66..357 271 25.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17476-PA 358 GE17476-PA 1..358 1..358 1938 100 Plus
Dyak\GE17230-PA 340 GE17230-PA 3..339 18..357 945 49.4 Plus
Dyak\GE19620-PA 346 GE19620-PA 11..345 22..357 634 35.5 Plus
Dyak\GE19619-PA 321 GE19619-PA 11..320 22..357 560 33.1 Plus
Dyak\GE16263-PA 361 GE16263-PA 58..357 60..357 287 26.8 Plus

RH17413.hyp Sequence

Translation from 136 to 1212

> RH17413.hyp
MSEAAVPASNANANATEKMASLVREAENLKTKLEEERQKLNDVNLSNIAE
RLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAF
TTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAK
KRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHS
GDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSV
KFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSG
RLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSW
DYTIRVWA*

RH17413.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta5-PA 358 CG10763-PA 1..358 1..358 1894 100 Plus
Gbeta13F-PH 340 CG10545-PH 3..339 18..357 932 49.4 Plus
Gbeta13F-PG 340 CG10545-PG 3..339 18..357 932 49.4 Plus
Gbeta13F-PF 340 CG10545-PF 3..339 18..357 932 49.4 Plus
Gbeta13F-PE 340 CG10545-PE 3..339 18..357 932 49.4 Plus