BDGP Sequence Production Resources |
Search the DGRC for RH17958
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 179 |
Well: | 58 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG6770-RA |
Protein status: | RH17958.pep: gold |
Sequenced Size: | 788 |
Gene | Date | Evidence |
---|---|---|
CG6770-RA | 2009-01-21 | est gleaning |
CG6770 | 2009-06-08 | Manual selection by Joe Carlson |
788 bp assembled on 2009-08-10
GenBank Submission: BT099526.1
> RH17958.complete GAATTCCGTTCGCAGCTCAGCGAAAAGTGAACAAAAAAAAGCAGAAGAGA AATTTGGAAAGCAGCCTGCAAGTTTGCAGAGAAACAAAAAGCAGACACCA ACCAAGAACGCAGTTAGTTTTGCAACCTTAAATCGCCATTATGTCCGAGG CCCACTTCGATGAGTACGAGCACTACAACTTCGACCATGACAAGCACATC TTCTCTGGACACAGCGGCAAGCAGCGCAACAAGAGGGAGGCCAATGAGCA CACCAACCACTTCGATCCCTCCGGTCATTCCCGCAAGATTCTGACCAAGC TGATGAACACCAACAACAACAACAAGAAAGCCGCCGCCTGCAAGAACTGA TGCAGGGCATCGACGGAGGCGGTGGAACAGGAGAGAAAGAAGTAACGGGG CCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCAAAAG CAAAGGAGAGAAGAAAAAGAAGAACAAGCAGCAGTTTTGCTGGAAGGAAA GAAAGAAAAACAAAAGCCAGCTGGAAATACACATTGCATTTGTATTGTGC ATTGGCTTTTCATGCGGCGCTAAACTTTGTGAACATTATAATAATTTTAT TTCGCTTATAATTTCACAAACACAAAAAAAGAAAGGCACATACTACTCTT AGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCT AAGCCTTAGAGCGTTTCAAATAATGAAGTTTGACTTAGGTAATACATATA AAATAAAGAGAAAACCAAAACTGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6770-RA | 755 | CG6770-RA | 1..755 | 16..770 | 3775 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12044027..12044797 | 773..2 | 3795 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12045341..12046114 | 775..2 | 3870 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12045341..12046114 | 775..2 | 3870 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12044027..12044797 | 1..773 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 1..210 | 141..350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 1..210 | 141..350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 1..210 | 141..350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 1..210 | 141..350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 1..734 | 16..749 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 1..734 | 16..749 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 4..776 | 1..773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6770-RA | 4..776 | 1..773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12045343..12046114 | 1..773 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12045343..12046114 | 1..773 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12045343..12046114 | 1..773 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12045343..12046114 | 1..773 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12045343..12046114 | 1..773 | 99 | Minus |
Translation from 140 to 349
> RH17958.pep MSEAHFDEYEHYNFDHDKHIFSGHSGKQRNKREANEHTNHFDPSGHSRKI LTKLMNTNNNNKKAAACKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23497-PA | 68 | GF23497-PA | 1..68 | 1..69 | 304 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10281-PA | 68 | GG10281-PA | 1..68 | 1..69 | 343 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13777-PA | 66 | GH13777-PA | 1..62 | 1..62 | 300 | 91.9 | Plus |
Dgri\GH24953-PA | 66 | GH24953-PA | 1..66 | 1..69 | 270 | 78.3 | Plus |
Dgri\GH10200-PA | 66 | GH10200-PA | 1..66 | 1..69 | 270 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6770-PA | 69 | CG6770-PA | 1..69 | 1..69 | 386 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17181-PA | 66 | GI17181-PA | 1..62 | 1..62 | 296 | 90.3 | Plus |
Dmoj\GI14885-PA | 68 | GI14885-PA | 1..68 | 1..69 | 273 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14142-PA | 68 | GL14142-PA | 1..68 | 1..69 | 297 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19852-PA | 68 | GA19852-PA | 1..68 | 1..69 | 297 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26395-PA | 69 | GM26395-PA | 1..69 | 1..69 | 359 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22138-PA | 69 | GD22138-PA | 1..69 | 1..69 | 359 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22139-PA | 66 | GJ22139-PA | 1..62 | 1..62 | 297 | 90.3 | Plus |
Dvir\GJ24028-PA | 66 | GJ24028-PA | 1..66 | 1..69 | 280 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19032-PA | 68 | GK19032-PA | 1..68 | 1..69 | 301 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12490-PA | 69 | GE12490-PA | 1..69 | 1..69 | 359 | 100 | Plus |
Translation from 140 to 349
> RH17958.hyp MSEAHFDEYEHYNFDHDKHIFSGHSGKQRNKREANEHTNHFDPSGHSRKI LTKLMNTNNNNKKAAACKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6770-PA | 69 | CG6770-PA | 1..69 | 1..69 | 386 | 100 | Plus |