BDGP Sequence Production Resources |
Search the DGRC for RH18694
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 186 |
Well: | 94 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8066-RA |
Protein status: | RH18694.pep: gold |
Preliminary Size: | 418 |
Sequenced Size: | 1154 |
Gene | Date | Evidence |
---|---|---|
CG8066 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8066 | 2002-11-12 | Blastp of sequenced clone |
CG8066 | 2008-04-29 | Release 5.5 accounting |
CG8066 | 2008-08-15 | Release 5.9 accounting |
CG8066 | 2008-12-18 | 5.12 accounting |
1154 bp (1154 high quality bases) assembled on 2002-11-12
GenBank Submission: AY089658
> RH18694.complete GGTTGAGTTTTGCTACTATCGCCGCCATGTCCAACGTTCCAATTGTAGGC GGGATCAGTCAGCTGGAGGGGAATGAGAGGAAGGAGGCTCTGGAACTCCT CGATGCCACCCTCGCACAGTTGGCCAACGGAGATGGACCCAGCTACAAGG CACTTAATGTAACCTCTGTGACGGGTCAGGTCGTAGCTGGAAGACTCAAC ACCTACGAGGTGCAGCTGGACAATGGATCCGAGATAAAACAGGGCACTGT GCAGATCTGGAGTCGCGCATGGCTAAAGGAGAACGGCACCAACATCAAGA TCAAGTTCCCGGGTGAGGACGAACTGGACCACACCTGGTAGAAGGTTTTA CCTTAGACCTACATACAGTTTAACTCTTATCTTAAATGTTATACATATGT TATATACTGGACTTAATTATAGATACCCTTAGGGGGGAACCATATTCTTG CGACCTCAGGTAGCGTACAGAAGAGAGCCTTACCTTTACTATCTGGGAGG ATTTGTGTACATTTGGTTACATTAAAACATGATCCGATGGAAAAGGTTCT CTTGGGTTTCAGGTACAAGCCGGTGAAGTAGGTTATAAAACTGTTCCGAT GTTGGTTAACCAGTTCTGTTGGCATAACCAGTTTGTTTATATCTCAATAT ATATATCTCAATAGGTGAATCGTATTATCTTTTCTCTCAACTATTGTGTG TGTTTAATTAGTCAGCGTGGGCGTCATCAGCGGTGTCAGTGGATGTTACA AATAATAATTCCCCCTTTCTTGCTGATAATAAGCTTGTTTTTTTTAAATA ATCAGAAGACCTTTCGAAAACAATAGACATTAGTAATTTATCAGAAACAC AACTGGCAACTGGTAACTAAACTAAAAGCGTCAGTAAACTCCACCCCCTA AAGTCATATATTCATTCTTATCAACCTTCATTGAATAATCATTATCTCTC GAAAAGTAGAAATGAAAACTTTAAACATTTGCTAACGACTGACTCAAATA AAGGTGTACTCACACAGAATGATTAGTCCATACAATGTTAATGCTCCTGA CCTGGGCAAACAATTAAAATGATATCACAAAACGACAGGCCTGTGCAAAA CCAAAGTAAAATATTAACCAATAAACTGAAGATTAAGCAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10392367..10393355 | 1137..149 | 4945 | 100 | Minus |
chr3R | 27901430 | chr3R | 10393419..10393566 | 149..2 | 740 | 100 | Minus |
chr3R | 27901430 | chr3R | 10393923..10394121 | 344..149 | 555 | 86.4 | Minus |
chr3R | 27901430 | chr3R | 10394179..10394283 | 149..45 | 315 | 86.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14567601..14568599 | 1147..149 | 4980 | 99.9 | Minus |
3R | 32079331 | 3R | 14568663..14568810 | 149..2 | 740 | 100 | Minus |
3R | 32079331 | 3R | 14569167..14569365 | 344..149 | 555 | 86.4 | Minus |
3R | 32079331 | 3R | 14569423..14569527 | 149..45 | 315 | 86.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14308432..14309430 | 1147..149 | 4980 | 99.8 | Minus |
3R | 31820162 | 3R | 14309494..14309641 | 149..2 | 740 | 100 | Minus |
3R | 31820162 | 3R | 14309998..14310196 | 344..149 | 565 | 86.4 | Minus |
3R | 31820162 | 3R | 14310254..14310358 | 149..45 | 315 | 86.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10392366..10393355 | 149..1138 | 99 | <- | Minus |
chr3R | 10393420..10393566 | 1..148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..315 | 27..341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..315 | 27..341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..315 | 27..341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..315 | 27..341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..315 | 27..341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..1136 | 2..1138 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..1136 | 2..1138 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 37..1173 | 1..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 1..1136 | 2..1138 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8066-RA | 37..1173 | 1..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14567610..14568599 | 149..1138 | 99 | <- | Minus |
3R | 14568664..14568810 | 1..148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14567610..14568599 | 149..1138 | 99 | <- | Minus |
3R | 14568664..14568810 | 1..148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14567610..14568599 | 149..1138 | 99 | <- | Minus |
3R | 14568664..14568810 | 1..148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10393332..10394321 | 149..1138 | 99 | <- | Minus |
arm_3R | 10394386..10394532 | 1..148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14308441..14309430 | 149..1138 | 99 | <- | Minus |
3R | 14309495..14309641 | 1..148 | 99 | Minus |
Translation from 2 to 340
> RH18694.hyp LSFATIAAMSNVPIVGGISQLEGNERKEALELLDATLAQLANGDGPSYKA LNVTSVTGQVVAGRLNTYEVQLDNGSEIKQGTVQIWSRAWLKENGTNIKI KFPGEDELDHTW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8066-PB | 104 | CG8066-PB | 1..104 | 9..112 | 538 | 100 | Plus |
CG8066-PA | 104 | CG8066-PA | 1..104 | 9..112 | 538 | 100 | Plus |
Cys-PA | 126 | CG8050-PA | 27..126 | 14..112 | 414 | 81 | Plus |
CG31313-PB | 124 | CG31313-PB | 10..124 | 1..112 | 252 | 46.1 | Plus |
CG31313-PA | 124 | CG31313-PA | 10..124 | 1..112 | 252 | 46.1 | Plus |
Translation from 26 to 340
> RH18694.pep MSNVPIVGGISQLEGNERKEALELLDATLAQLANGDGPSYKALNVTSVTG QVVAGRLNTYEVQLDNGSEIKQGTVQIWSRAWLKENGTNIKIKFPGEDEL DHTW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17474-PA | 94 | GF17474-PA | 1..94 | 1..104 | 290 | 60.6 | Plus |
Dana\GF17475-PA | 119 | GF17475-PA | 18..119 | 3..104 | 244 | 48 | Plus |
Dana\GF17473-PA | 134 | GF17473-PA | 25..124 | 5..104 | 217 | 41 | Plus |
Dana\GF15461-PA | 125 | GF15461-PA | 27..119 | 8..100 | 160 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21219-PA | 105 | GG21219-PA | 1..105 | 1..104 | 434 | 84.8 | Plus |
Dere\GG21208-PA | 126 | GG21208-PA | 27..126 | 6..104 | 410 | 80 | Plus |
Dere\GG21229-PA | 124 | GG21229-PA | 26..124 | 8..104 | 251 | 49.5 | Plus |
Dere\GG18301-PA | 122 | GG18301-PA | 24..116 | 8..100 | 166 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14129-PA | 122 | GH14129-PA | 23..122 | 6..104 | 264 | 53 | Plus |
Dgri\GH14128-PA | 107 | GH14128-PA | 5..102 | 3..100 | 224 | 52 | Plus |
Dgri\GH14130-PA | 132 | GH14130-PA | 32..132 | 8..104 | 215 | 48.5 | Plus |
Dgri\GH14131-PA | 120 | GH14131-PA | 22..119 | 6..103 | 155 | 38.4 | Plus |
Dgri\GH17753-PA | 124 | GH17753-PA | 32..119 | 13..100 | 147 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8066-PB | 104 | CG8066-PB | 1..104 | 1..104 | 538 | 100 | Plus |
CG8066-PA | 104 | CG8066-PA | 1..104 | 1..104 | 538 | 100 | Plus |
Cys-PA | 126 | CG8050-PA | 27..126 | 6..104 | 414 | 81 | Plus |
CG31313-PB | 124 | CG31313-PB | 26..124 | 8..104 | 251 | 49.5 | Plus |
CG31313-PA | 124 | CG31313-PA | 26..124 | 8..104 | 251 | 49.5 | Plus |
CG15369-PB | 122 | CG15369-PB | 23..116 | 7..100 | 170 | 41.1 | Plus |
CG15369-PA | 122 | CG15369-PA | 23..116 | 7..100 | 170 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10658-PA | 109 | GI10658-PA | 5..104 | 3..100 | 226 | 50 | Plus |
Dmoj\GI10659-PA | 124 | GI10659-PA | 27..124 | 8..104 | 218 | 49 | Plus |
Dmoj\GI10664-PA | 116 | GI10664-PA | 18..106 | 6..95 | 190 | 45.6 | Plus |
Dmoj\GI10660-PA | 119 | GI10660-PA | 21..109 | 6..95 | 189 | 44.4 | Plus |
Dmoj\GI10663-PA | 119 | GI10663-PA | 23..109 | 8..95 | 184 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24171-PA | 127 | GL24171-PA | 27..127 | 5..104 | 345 | 67.3 | Plus |
Dper\GL24172-PA | 122 | GL24172-PA | 28..122 | 13..104 | 257 | 56.8 | Plus |
Dper\GL26833-PA | 137 | GL26833-PA | 31..126 | 5..97 | 150 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20790-PA | 127 | GA20790-PA | 27..127 | 5..104 | 349 | 67.3 | Plus |
Dpse\GA26524-PA | 122 | GA26524-PA | 28..122 | 13..104 | 260 | 56.8 | Plus |
Dpse\GA13677-PA | 137 | GA13677-PA | 31..126 | 5..97 | 155 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25842-PA | 105 | GM25842-PA | 1..105 | 1..104 | 481 | 91.4 | Plus |
Dsec\GM26670-PA | 105 | GM26670-PA | 1..105 | 1..104 | 445 | 84.8 | Plus |
Dsec\GM25841-PA | 123 | GM25841-PA | 24..123 | 6..104 | 399 | 78 | Plus |
Dsec\GM26669-PA | 123 | GM26669-PA | 24..123 | 6..104 | 386 | 76 | Plus |
Dsec\GM25833-PA | 124 | GM25833-PA | 26..124 | 8..104 | 239 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20413-PA | 105 | GD20413-PA | 1..105 | 1..104 | 477 | 90.5 | Plus |
Dsim\GD20412-PA | 123 | GD20412-PA | 24..123 | 6..104 | 391 | 76 | Plus |
Dsim\GD20414-PA | 124 | GD20414-PA | 26..124 | 8..104 | 243 | 48.5 | Plus |
Dsim\GD16941-PA | 122 | GD16941-PA | 24..116 | 8..100 | 164 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23017-PA | 126 | GJ23017-PA | 26..126 | 5..104 | 273 | 55.4 | Plus |
Dvir\GJ23015-PA | 110 | GJ23015-PA | 6..103 | 3..98 | 240 | 49 | Plus |
Dvir\GJ19267-PA | 122 | GJ19267-PA | 22..116 | 6..100 | 166 | 38.5 | Plus |
Dvir\GJ23016-PA | 165 | GJ23016-PA | 42..114 | 21..92 | 132 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11350-PA | 124 | GK11350-PA | 21..124 | 3..104 | 353 | 67.3 | Plus |
Dwil\GK11742-PA | 128 | GK11742-PA | 30..128 | 8..104 | 269 | 55.6 | Plus |
Dwil\GK11349-PA | 106 | GK11349-PA | 7..100 | 6..99 | 258 | 55.3 | Plus |
Dwil\GK11352-PA | 120 | GK11352-PA | 20..115 | 3..100 | 221 | 50.5 | Plus |
Dwil\GK25384-PA | 129 | GK25384-PA | 26..122 | 7..103 | 164 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26441-PA | 105 | GE26441-PA | 1..105 | 1..104 | 444 | 84.8 | Plus |
Dyak\Cys-PA | 123 | GE26440-PA | 24..123 | 6..104 | 379 | 74 | Plus |
Dyak\GE26442-PA | 124 | GE26442-PA | 26..124 | 8..104 | 244 | 48.5 | Plus |