Clone RH20911 Report

Search the DGRC for RH20911

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:209
Well:11
Vector:pFlc-1
Associated Gene/Transcriptsw-RK
Protein status:RH20911.pep: gold
Sequenced Size:2439

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
sw-RK 2010-11-11 Gleaning Pick By Joe Carlson

Clone Sequence Records

RH20911.complete Sequence

2439 bp assembled on 2011-03-14

GenBank Submission: BT126135.1

> RH20911.complete
GAGTCGCATTTTTACATTGTTGAAAAATGATGATTTAAGTACTTAAAAAG
CAGCCGAACAACGAGTAAAGACAGTCAAGAGAGAACTTGGCCCGCCAGAG
ATCTAGAGTCCCGTACCGAACGCCCACTCGAACAGCAAATCGCAGCAGCT
AATCGCCCCGAGAAATGGATCGCAAGGCTGAGCTGGAACGCAAGAAGGCC
AAGTTGGCCGCCCTGCGCGAGGAGAAGGATCGCCGGCGTCGCGAGAAGGA
GATCAAGGACATGGAGGAGGCGGCCGGTCGCATTGGCGGCGGAGCAGGCA
TCGACAAGGATCAGCGCAAGGATCTCGACGAAATGCTGTCATCGCTGGGC
GTGGCCCCCGTCTCCGAGGTCCTTTCCTCACTCTCCTCCGTCAACTCGAT
GACTTCGGACAACTCGAACACACAGACCCCCGACGCCAGCCTCCAAGCCA
CTGTCAATGGCCAGAGCGGCGGAAAGAAACAGCCCCTCAACCTAAGCGTC
TACAATGTGCAGGCTACGAACATTCCACCAAAAGAGACACTGGTCTACAC
AAAGCAGACCCAGACGACCAGTACCGGAGGCGGAAACGGCGATGGATATA
TGGAGGACTGGTGGCGTCCACGTAAAGCTCATGCTACGGATTATTATGAT
GAATACAATCTTAATCCGGGTTTAGAGTGGGAGGATGAATTCACAGACGA
CGAAGAGAGCTCACTGCAGAACCTGGGCAACGGATTCACCTCCAAGCTGC
CACCGGGCTATCTCACCCACGGCCTGCCCACCGTTAAGGACGTCGCCCCG
GCCATCACACCACTCGAGATCAAGAAGGAGACTGAAGTGAAGAAGGAGGT
CAACGAGCTGTCCGAGGAGCAGAAGCAGATGATCATACTGTCGGAGAACT
TCCAGCGGTTCGTGGTGCGTGCCGGCCGCGTCATCGAACGGGCCCTCTCG
GAGAATGTGGACATATACACGGACTACATCGGCGGCGGCGACAGCGAGGA
GGCGAACGACGAGCGATCGCATGCGCGGCTCTCGCTGAACCGCGTCTTCT
ACGACGAGCGCTGGTCGAAGAACCGCTGCATCACCAGTATGGACTGGTCC
ACCCACTTCCCCGAGCTGGTGGTGGGCTCGTACCACAACAACGAGGAGAG
TCCGAACGAGCCGGACGGCGTGGTGATGGTGTGGAACACCAAGTTCAAGA
AGAGCACGCCCGAGGACGTCTTCCACTGCCAGAGCGCGGTGATGTCCACC
TGCTTTGCCAAGTTCAATCCCAACCTGATCCTCGGCGGCACCTATTCGGG
CCAGATTGTGCTGTGGGACAATCGCGTGCAGAAGCGCACGCCCATACAGC
GCACGCCCCTCAGTGCCGCGGCGCACACGCATCCCGTCTACTGCCTCCAA
ATGGTGGGCACCCAGAATGCGCACAACGTCATCTCCATATCCTCGGACGG
CAAGCTGTGCTCCTGGTCGCTGGACATGCTGTCGCAACCACAGGACACGC
TGGAGCTGCAGCAGCGCCAGTCGAAGGCCATTGCCATTACATCGATGGCC
TTCCCGGCCAACGAGATCAATAGCCTGGTGATGGGCAGTGAGGACGGCTA
CGTCTACTCCGCCTCGCGCCACGGCCTGCGCTCCGGGGTCAACGAGGTTT
ACGAACGCCATCTTGGCCCTATCACTGGCATATCCACGCACTACAACCAG
CTGTCGCCGGACTTTGGCCACCTCTTCCTAACCTCGTCCATTGACTGGAC
CATCAAGCTCTGGTCGCTAAAGGACACAAAGCCGCTGTACTCCTTTGAGG
ACAACTCCGACTACGTGATGGACGTCGCCTGGTCGCCCGTGCATCCCGCA
CTCTTCGCCGCCGTCGACGGCAGCGGCCGCCTGGATCTGTGGAACCTCAA
CCAAGACACGGAGGTGCCGACCGCCTCGATTGTCGTGGCGGGAGCACCAG
CCCTTAACCGCGTCTCTTGGACCCCATCCGGTCTGCACGTGTGCATCGGC
GACGAGGCCGGCAAGCTGTACGTGTACGACGTGGCCGAGAACCTGGCGCA
GCCATCGCGCGACGAATGGTCGCGGTTCAACACCCATCTTAGCGAGATCA
AGATGAACCAGAGCGATGAGGTCTAGGACGATATAGTTAACTGGTAGTTG
AGAGTCGGTACCACTTTTGCTAATCTTACAGGAGCGACCTTGAATGAAAT
TTAATTTGTATTTTTGTATCTTTTGTGATCCCGCTACTGTGTATAGCCCA
GAACTCAAAACTTAACCGCAGTCCAAGTGCTCAGAATCACTCCAAAGCCC
CCAAGAAATCAGGGGAAACTGCAAAATTCTCTAGATGACCACAGTAACTG
TACTAGAAGTTTTATTCAATGAAACTCGATAGAATAGAGATAAACATAAA
TGAATACATATATATATACGAAAGAAAAAAAAAAAAAAA

RH20911.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 20094728..20095652 1773..849 4610 99.9 Minus
chrX 22417052 chrX 20063479..20064403 1773..849 4580 99.7 Minus
chrX 22417052 chrX 20071295..20072219 1773..849 4580 99.7 Minus
chrX 22417052 chrX 20086854..20087778 1773..849 4580 99.7 Minus
chrX 22417052 chrX 20079044..20079936 1741..849 4435 99.8 Minus
chrX 22417052 chrX 20070579..20071230 2422..1771 3260 100 Minus
chrX 22417052 chrX 20086138..20086789 2422..1771 3260 100 Minus
chrX 22417052 chrX 20094012..20094663 2422..1771 3260 100 Minus
chrX 22417052 chrX 20078687..20078973 2065..1779 1390 99 Minus
chrX 22417052 chrX 20078430..20078689 2352..2093 1285 99.6 Minus
chrX 22417052 chrX 20101093..20101333 320..80 1205 100 Minus
chrX 22417052 chrX 20062950..20063316 2333..1941 1020 85.8 Minus
chrX 22417052 chrX 20072597..20072751 849..695 775 100 Minus
chrX 22417052 chrX 20080314..20080468 849..695 775 100 Minus
chrX 22417052 chrX 20088156..20088310 849..695 775 100 Minus
chrX 22417052 chrX 20096030..20096184 849..695 775 100 Minus
chrX 22417052 chrX 20064786..20064940 849..695 760 99.4 Minus
chrX 22417052 chrX 20100873..20101019 466..320 735 100 Minus
chrX 22417052 chrX 20100359..20100489 595..465 655 100 Minus
chrX 22417052 chrX 20066817..20066947 595..465 640 99.2 Minus
chrX 22417052 chrX 20074681..20074811 595..465 640 99.2 Minus
chrX 22417052 chrX 20082380..20082510 595..465 640 99.2 Minus
chrX 22417052 chrX 20090240..20090370 595..465 640 99.2 Minus
chrX 22417052 chrX 20101668..20101747 81..2 400 100 Minus
chrX 22417052 chrX 20097702..20097750 696..648 245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20229139..20230063 1773..849 4610 99.9 Minus
X 23542271 X 20205922..20206846 1773..849 4595 99.8 Minus
X 23542271 X 20174931..20175855 1773..849 4580 99.7 Minus
X 23542271 X 20190482..20191406 1773..849 4580 99.7 Minus
X 23542271 X 20198198..20199122 1773..849 4580 99.7 Minus
X 23542271 X 20182758..20183682 1773..849 4565 99.6 Minus
X 23542271 X 20213615..20214507 1741..849 4435 99.8 Minus
X 23542271 X 20221297..20222189 1741..849 4435 99.8 Minus
X 23542271 X 20182042..20182693 2422..1771 3260 100 Minus
X 23542271 X 20228423..20229074 2422..1771 3260 100 Minus
X 23542271 X 20220653..20221226 2352..1779 2825 99.5 Minus
X 23542271 X 20190123..20190417 2065..1771 1430 99 Minus
X 23542271 X 20197839..20198133 2065..1771 1430 99 Minus
X 23542271 X 20205563..20205857 2065..1771 1430 99 Minus
X 23542271 X 20213258..20213544 2065..1779 1390 99 Minus
X 23542271 X 20205306..20205565 2352..2093 1300 100 Minus
X 23542271 X 20213001..20213260 2352..2093 1300 100 Minus
X 23542271 X 20189866..20190125 2352..2093 1285 99.6 Minus
X 23542271 X 20197582..20197841 2352..2093 1285 99.6 Minus
X 23542271 X 20235508..20235748 320..80 1205 100 Minus
X 23542271 X 20174402..20174768 2333..1941 1005 85.5 Minus
X 23542271 X 20176238..20176392 849..695 775 100 Minus
X 23542271 X 20184060..20184214 849..695 775 100 Minus
X 23542271 X 20191789..20191943 849..695 775 100 Minus
X 23542271 X 20199505..20199659 849..695 775 100 Minus
X 23542271 X 20207229..20207383 849..695 775 100 Minus
X 23542271 X 20214885..20215039 849..695 775 100 Minus
X 23542271 X 20222567..20222721 849..695 775 100 Minus
X 23542271 X 20230441..20230595 849..695 775 100 Minus
X 23542271 X 20235288..20235434 466..320 735 100 Minus
X 23542271 X 20234774..20234904 595..465 655 100 Minus
X 23542271 X 20178269..20178399 595..465 640 99.2 Minus
X 23542271 X 20186144..20186274 595..465 640 99.2 Minus
X 23542271 X 20193874..20194004 595..465 640 99.2 Minus
X 23542271 X 20201590..20201720 595..465 640 99.2 Minus
X 23542271 X 20209260..20209390 595..465 640 99.2 Minus
X 23542271 X 20216916..20217046 595..465 640 99.2 Minus
X 23542271 X 20224651..20224781 595..465 640 99.2 Minus
X 23542271 X 20236083..20236162 81..2 400 100 Minus
X 23542271 X 20232117..20232165 696..648 245 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 20214278..20215202 1773..849 4610 99.8 Minus
X 23527363 X 20206404..20207328 1773..849 4580 99.6 Minus
X 23527363 X 20190845..20191769 1773..849 4580 99.6 Minus
X 23527363 X 20183029..20183953 1773..849 4580 99.6 Minus
X 23527363 X 20198594..20199486 1741..849 4435 99.7 Minus
X 23527363 X 20213562..20214213 2422..1771 3260 100 Minus
X 23527363 X 20205688..20206339 2422..1771 3260 100 Minus
X 23527363 X 20190129..20190780 2422..1771 3260 100 Minus
X 23527363 X 20198237..20198523 2065..1779 1390 98.9 Minus
X 23527363 X 20197980..20198239 2352..2093 1285 99.6 Minus
X 23527363 X 20220647..20220887 320..80 1205 100 Minus
X 23527363 X 20215580..20215734 849..695 775 100 Minus
X 23527363 X 20207706..20207860 849..695 775 100 Minus
X 23527363 X 20199864..20200018 849..695 775 100 Minus
X 23527363 X 20192147..20192301 849..695 775 100 Minus
X 23527363 X 20184336..20184490 849..695 775 100 Minus
X 23527363 X 20220427..20220573 466..320 735 100 Minus
X 23527363 X 20182673..20182823 2140..1990 695 97.3 Minus
X 23527363 X 20219913..20220043 595..465 655 100 Minus
X 23527363 X 20201930..20202060 595..465 640 99.2 Minus
X 23527363 X 20209790..20209920 595..465 640 99.2 Minus
X 23527363 X 20194231..20194361 595..465 640 99.2 Minus
X 23527363 X 20186367..20186497 595..465 640 99.2 Minus
X 23527363 X 20221222..20221301 81..2 400 100 Minus
X 23527363 X 20182500..20182612 2333..2221 385 89.3 Minus
X 23527363 X 20217256..20217304 696..648 245 100 Minus
X 23527363 X 20182608..20182679 2216..2145 210 86.1 Minus
X 23527363 X 20219467..20219500 627..594 170 100 Minus
X 23527363 X 20209340..20209373 627..594 170 100 Minus
X 23527363 X 20201498..20201531 627..594 170 100 Minus
X 23527363 X 20193781..20193814 627..594 170 100 Minus
X 23527363 X 20185917..20185950 627..594 170 100 Minus
X 23527363 X 20182863..20182911 1913..1865 155 87.7 Minus
Blast to na_te.dros performed 2019-03-16 22:26:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Kepler 722 Dbuz\Kepler KEPLER 722bp 440..493 2418..2366 123 72.2 Minus

RH20911.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:27:10 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 20094011..20094661 1773..2424 99 <- Minus
chrX 20094729..20095651 850..1772 99 <- Minus
chrX 20096030..20096182 697..849 100 <- Minus
chrX 20097702..20097749 649..696 100 <- Minus
chrX 20099008..20099028 628..648 100 <- Minus
chrX 20099913..20099945 595..627 100 <- Minus
chrX 20100360..20100487 467..594 100 <- Minus
chrX 20100873..20101019 320..466 100 <- Minus
chrX 20101094..20101331 82..319 100 <- Minus
chrX 20101668..20101747 1..81 98   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-14 09:57:32 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RK 1..1962 165..2126 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:55:30 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RK 1..1962 165..2126 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:27:52 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RK 1..1962 165..2126 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-14 09:57:32 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RK 220..2642 1..2424 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:55:30 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RK 36..2458 1..2424 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:52 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RK 36..2458 1..2424 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:10 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
X 20235288..20235434 320..466 100 <- Minus
X 20235509..20235746 82..319 100 <- Minus
X 20236083..20236162 1..81 98   Minus
X 20228422..20229072 1773..2424 99 <- Minus
X 20229140..20230062 850..1772 99 <- Minus
X 20230441..20230593 697..849 100 <- Minus
X 20232117..20232164 649..696 100 <- Minus
X 20233423..20233443 628..648 100 <- Minus
X 20234328..20234360 595..627 100 <- Minus
X 20234775..20234902 467..594 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:10 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
X 20235288..20235434 320..466 100 <- Minus
X 20235509..20235746 82..319 100 <- Minus
X 20236083..20236162 1..81 98   Minus
X 20228422..20229072 1773..2424 99 <- Minus
X 20229140..20230062 850..1772 99 <- Minus
X 20230441..20230593 697..849 100 <- Minus
X 20232117..20232164 649..696 100 <- Minus
X 20233423..20233443 628..648 100 <- Minus
X 20234328..20234360 595..627 100 <- Minus
X 20234775..20234902 467..594 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:10 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
X 20235288..20235434 320..466 100 <- Minus
X 20235509..20235746 82..319 100 <- Minus
X 20236083..20236162 1..81 98   Minus
X 20228422..20229072 1773..2424 99 <- Minus
X 20229140..20230062 850..1772 99 <- Minus
X 20230441..20230593 697..849 100 <- Minus
X 20232117..20232164 649..696 100 <- Minus
X 20233423..20233443 628..648 100 <- Minus
X 20234328..20234360 595..627 100 <- Minus
X 20234775..20234902 467..594 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:55:30 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20099496..20100146 1773..2424 99 <- Minus
arm_X 20100214..20101136 850..1772 99 <- Minus
arm_X 20101515..20101667 697..849 100 <- Minus
arm_X 20103191..20103238 649..696 100 <- Minus
arm_X 20104497..20104517 628..648 100 <- Minus
arm_X 20105402..20105434 595..627 100 <- Minus
arm_X 20105849..20105976 467..594 100 <- Minus
arm_X 20106362..20106508 320..466 100 <- Minus
arm_X 20106583..20106820 82..319 100 <- Minus
arm_X 20107157..20107236 1..81 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:01:27 Download gff for RH20911.complete
Subject Subject Range Query Range Percent Splice Strand
X 20213561..20214211 1773..2424 99 <- Minus
X 20214279..20215201 850..1772 99 <- Minus
X 20215580..20215732 697..849 100 <- Minus
X 20217256..20217303 649..696 100 <- Minus
X 20218562..20218582 628..648 100 <- Minus
X 20219467..20219499 595..627 100 <- Minus
X 20219914..20220041 467..594 100 <- Minus
X 20220427..20220573 320..466 100 <- Minus
X 20220648..20220885 82..319 100 <- Minus
X 20221222..20221301 1..81 98   Minus

RH20911.pep Sequence

Translation from 164 to 2125

> RH20911.pep
MDRKAELERKKAKLAALREEKDRRRREKEIKDMEEAAGRIGGGAGIDKDQ
RKDLDEMLSSLGVAPVSEVLSSLSSVNSMTSDNSNTQTPDASLQATVNGQ
SGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDGYMEDWW
RPRKAHATDYYDEYNLNPGLEWEDEFTDDEESSLQNLGNGFTSKLPPGYL
THGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFV
VRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERW
SKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPE
DVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLS
AAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQ
RQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL
GPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDY
VMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRV
SWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQS
DEV*

RH20911.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20447-PA 549 GF20447-PA 13..549 101..653 2780 93.5 Plus
Dana\GF24523-PA 585 GF24523-PA 224..490 368..634 220 24.8 Plus
Dana\GF12212-PA 737 GF12212-PA 296..689 242..627 213 21 Plus
Dana\GF21298-PA 666 GF21298-PA 83..510 227..634 192 24 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18006-PA 671 GG18006-PA 1..671 1..653 3472 96.9 Plus
Dere\GG13896-PA 571 GG13896-PA 224..490 368..634 219 24.5 Plus
Dere\GG22073-PA 739 GG22073-PA 297..690 242..627 216 21 Plus
Dere\GG19683-PA 651 GG19683-PA 83..503 227..634 203 23.2 Plus
Dere\GG14573-PA 687 GG14573-PA 329..665 335..651 173 22.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12086-PA 661 GH12086-PA 1..661 1..653 3057 93.2 Plus
Dgri\GH14867-PA 571 GH14867-PA 224..490 368..634 224 25.5 Plus
Dgri\GH23321-PA 660 GH23321-PA 161..505 300..634 205 23.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
sw-PK 653 CG18000-PK 1..653 1..653 3436 100 Plus
sw-PJ 663 CG18000-PJ 1..663 1..653 3415 98.5 Plus
sw-PE 642 CG18000-PE 1..642 1..653 3341 98.3 Plus
sw-PD 643 CG18000-PD 1..643 1..653 3329 98.2 Plus
sw-PL 643 CG18000-PL 1..643 1..653 3329 98.2 Plus
sw-PM 643 CG18000-PM 1..643 1..653 3329 98.2 Plus
sw-PF 650 CG18000-PF 1..650 1..653 3322 97.1 Plus
sw-PH 635 CG18000-PH 1..635 1..653 3293 97.2 Plus
sw-PG 636 CG18000-PG 1..636 1..653 3281 97.1 Plus
sw-PO 643 CG18000-PO 1..643 1..653 3274 96.1 Plus
sw-PN 634 CG18000-PN 1..634 1..653 3220 96 Plus
sw-PB 627 CG18000-PB 1..627 1..653 3220 95.9 Plus
sw-PA 634 CG18000-PA 1..634 1..653 3220 96 Plus
sw-PC 626 CG18000-PC 1..626 1..653 3220 95.9 Plus
sw-PI 627 CG18000-PI 1..627 1..653 3183 94.9 Plus
Sdic2-PC 543 CG33497-PC 9..543 93..653 2701 92.9 Plus
Sdic2-PB 535 CG33497-PB 9..535 93..653 2701 92.7 Plus
Sdic2-PA 543 CG33497-PA 9..543 93..653 2701 92.9 Plus
CG46276-PA 533 CG46276-PA 9..533 93..653 2619 91.1 Plus
CG46275-PA 533 CG46275-PA 9..533 93..653 2619 91.1 Plus
Sdic3-PG 533 CG32823-PG 9..533 93..653 2619 91.1 Plus
Sdic3-PF 533 CG32823-PF 9..533 93..653 2619 91.1 Plus
Sdic3-PE 533 CG32823-PE 9..533 93..653 2619 91.1 Plus
CG46277-PA 544 CG46277-PA 9..544 93..653 2538 87.3 Plus
Sdic1-PA 517 CG9580-PA 9..517 93..653 2392 84.8 Plus
Sdic1-PC 480 CG9580-PC 9..429 93..536 2164 93.5 Plus
Sdic4-PE 487 CG33499-PE 9..425 93..536 2121 92.3 Plus
Dnai2-PB 576 CG6053-PB 224..490 368..634 215 24.8 Plus
Dnai2-PC 585 CG6053-PC 224..490 368..634 215 24.8 Plus
CG9313-PC 739 CG9313-PC 278..690 226..627 207 21.7 Plus
CG9313-PA 739 CG9313-PA 278..690 226..627 207 21.7 Plus
CG9313-PB 740 CG9313-PB 279..691 226..627 207 21.7 Plus
CG13930-PA 685 CG13930-PA 313..631 321..618 180 23.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11093-PA 643 GI11093-PA 1..643 1..653 2928 90.2 Plus
Dmoj\GI13720-PA 585 GI13720-PA 224..490 368..634 226 25.2 Plus
Dmoj\GI21066-PA 747 GI21066-PA 301..699 237..627 222 22.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12916-PA 285 GL12916-PA 1..220 1..230 813 88.3 Plus
Dper\GL12916-PA 285 GL12916-PA 219..285 587..653 334 89.6 Plus
Dper\GL16341-PA 571 GL16341-PA 224..490 368..634 221 25.2 Plus
Dper\GL26732-PA 644 GL26732-PA 127..497 265..624 213 25.8 Plus
Dper\GL25707-PA 499 GL25707-PA 8..384 265..634 183 22.4 Plus
Dper\GL12410-PA 691 GL12410-PA 331..654 335..639 156 20.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22798-PA 661 GA22798-PA 1..661 1..653 3159 94.7 Plus
Dpse\GA13906-PA 644 GA13906-PA 127..497 265..624 224 26.6 Plus
Dpse\GA25088-PB 742 GA25088-PB 292..694 233..627 222 21.8 Plus
Dpse\GA19324-PA 571 GA19324-PA 224..490 368..634 221 25.2 Plus
Dpse\GA25088-PA 791 GA25088-PA 341..743 233..627 221 21.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22686-PA 537 GM22686-PA 15..537 111..653 2737 93.5 Plus
Dsec\GM24721-PA 585 GM24721-PA 224..490 368..634 218 24.5 Plus
Dsec\GM15791-PA 698 GM15791-PA 256..649 242..627 218 21.3 Plus
Dsec\GM14183-PA 685 GM14183-PA 327..663 335..651 184 22.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22919-PA 241 GD22919-PA 1..241 413..653 1296 100 Plus
Dsim\GD15550-PA 167 GD15550-PA 1..144 1..144 746 100 Plus
Dsim\GD16876-PA 651 GD16876-PA 127..503 265..634 230 24.4 Plus
Dsim\GD11552-PA 739 GD11552-PA 297..690 242..627 222 21.3 Plus
Dsim\GD20029-PA 81 GD20029-PA 29..69 511..551 209 92.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:05:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15778-PA 613 GJ15778-PA 1..613 1..653 2771 84.3 Plus
Dvir\GJ21989-PA 749 GJ21989-PA 308..701 242..627 232 24 Plus
Dvir\GJ14064-PA 587 GJ14064-PA 224..490 368..634 219 24.8 Plus
Dvir\GJ15978-PA 662 GJ15978-PA 161..505 300..634 168 22.3 Plus
Dvir\GJ12900-PA 760 GJ12900-PA 407..705 335..616 158 23.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:05:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25594-PA 660 GK25594-PA 1..660 1..653 3107 94.6 Plus
Dwil\GK10479-PA 585 GK10479-PA 224..490 368..634 218 24.8 Plus
Dwil\GK17990-PA 741 GK17990-PA 300..693 242..627 218 21.8 Plus
Dwil\GK25656-PA 653 GK25656-PA 83..462 227..589 217 25.6 Plus
Dwil\GK18227-PA 683 GK18227-PA 164..505 296..627 182 22.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15363-PA 671 GE15363-PA 1..671 1..653 3472 96.9 Plus
Dyak\GE20187-PA 585 GE20187-PA 224..490 368..634 221 24.5 Plus
Dyak\GE12154-PA 739 GE12154-PA 297..690 242..627 221 22 Plus
Dyak\GE20931-PA 685 GE20931-PA 313..663 321..651 192 22.8 Plus

RH20911.hyp Sequence

Translation from 164 to 2125

> RH20911.hyp
MDRKAELERKKAKLAALREEKDRRRREKEIKDMEEAAGRIGGGAGIDKDQ
RKDLDEMLSSLGVAPVSEVLSSLSSVNSMTSDNSNTQTPDASLQATVNGQ
SGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDGYMEDWW
RPRKAHATDYYDEYNLNPGLEWEDEFTDDEESSLQNLGNGFTSKLPPGYL
THGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFV
VRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERW
SKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPE
DVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLS
AAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQ
RQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL
GPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDY
VMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRV
SWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQS
DEV*

RH20911.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
sw-PK 653 CG18000-PK 1..653 1..653 3436 100 Plus
sw-PJ 663 CG18000-PJ 1..663 1..653 3415 98.5 Plus
sw-PE 642 CG18000-PE 1..642 1..653 3341 98.3 Plus
sw-PD 643 CG18000-PD 1..643 1..653 3329 98.2 Plus
sw-PL 643 CG18000-PL 1..643 1..653 3329 98.2 Plus