BDGP Sequence Production Resources |
Search the DGRC for RH21749
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 217 |
Well: | 49 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Pa1-RA |
Protein status: | RH21749.pep: gold |
Preliminary Size: | 446 |
Sequenced Size: | 1643 |
Gene | Date | Evidence |
---|---|---|
CG11750 | 2001-12-13 | Blastp of sequenced clone |
CG11750 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11750 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11750 | 2008-04-29 | Release 5.5 accounting |
CG11750 | 2008-08-15 | Release 5.9 accounting |
CG11750 | 2008-12-18 | 5.12 accounting |
1643 bp (1643 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070686
> RH21749.complete ACGTTCCAGAAAGGTCGCGAAACCAATAGGTTCTATTGTGGAAAGAAACG CAAATTTCCAGTTCATTTGGATTGTTTAAATCCGAGAAAACGATGGCAAC GGATGTGGAGCCGGCGGCGAATACGGCGGACAAGTTCTCCGCCAACGCGG AGGAGCTAGAGGGCTACTATCTGATGCTGGAGGCGGGAAATATTCCGGAA CTGCAATGGCAATTTCCGGGACGCAGGGCTCCATCGCCGGAGGCGGGATC TGGCGGCAATAGCAAGGAACTCGAACAGGCCACCGACGCCATTGAGCAGG AACCGCAGAAGGCCAACGACTTTGATTTCAGCGACGATGTGGCCCCCACC CAGATGCGCGTCCGCAGCCAGACGTCCACGCCCAAGTCGGCCAAAAAGAA GACGGCCAACTTCGCCGGCGTCATGGAGACGCTGAAGAAGAAGAATGCCG AGAGCTCATAGCACCCGCCGAAATTCTGATGCTGATCCGGTCCAGGCAAT CGGCTGCAGATCGTACTCTATCGCCATGCGGACTAGTCTATAAGCATCAG TCGTTTTACAACCATCGACAGGATGGGCTGTGGAGCTCTGCTGCAAATCG CATTAATGTAAGGATTTAGAGAGAGTTTGAACTTCAATTTACTTAAGATT TAAATTACCATACTTATAGTTAGCATTTAGAGAGTTTGAAGTTTGAACAT CAAAACATAAGCTTATTATGACTTATTAGTCAGCATCTAGAGAGGAAGTT TAAACATCAAAACATAGGCATATTATGACTTAATTACCATATTCATGTGA CTAGCTTGTAGCTTAAATTGCAGCAGTCTTTGGAATTCTAAAAAACTTTG TGAACCAACAAGTTGCAACTCAGAGAAGTTTGAACTTCAATTACCATATA TGCATAACTAGCTGTTAAGGATGTTAACTCCCATTGCATTGGTCAGTTCT TCATTTTAGACTAAGAACTTGTAATTGAGAAGATAGCATAGAACTAATCA ACTTATGTTTAAGCAGAGGGATGTGTATGTGATCCTTAATTAGCACGTGG GAAATTTACGTTCTAAATGTTAATTGTCTTTATTTGATATATTATGACAA TATTCTTGATAGTATTGTCCAAACCGACGTTTGAAGACTAGAATATAGAA TATAGGATAGAACGGATGTAAATTTAAATCCAATGCGAGTAAAGCAGATA ACAAGATAGGCAACTGTAGATCAGTCAACTTCTGTACATAAAAGAACTGA ATTTCACTAATAGCTGTTAAAACTAGAATATAGAATGTAGGATAGAACGG ATGTACATTTAAATACAAGATGAGTAAGATAACTGTTTAGTAAGGCAACT GTAGATCAGTCAACTTCCGTACATACAACTAATACGAAATGAATCAGCAC AGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTAC TAAGAATTATGATAAGCCAAGGTTGTTCCGGAAAACGTAACTCCATCCCT TTCGTTTTCGTAGAAAAACCTTCTATATATAATGACATCATTATATGATG TTATGTGTAGATTAGAATTCCCATATGCTGCTAACCTAATGGTTCGCAGT TAATAAAAGTTAGCATTTAAACACGTGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11750-RA | 1690 | CG11750-RA | 28..1658 | 4..1633 | 8055 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11250768..11252091 | 302..1626 | 6260 | 98.5 | Plus |
chrX | 22417052 | chrX | 11250404..11250701 | 4..301 | 1445 | 99 | Plus |
chrX | 22417052 | chrX | 11251737..11251840 | 1137..1240 | 295 | 85.6 | Plus |
chrX | 22417052 | chrX | 11251602..11251705 | 1272..1375 | 250 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11359604..11360936 | 302..1633 | 6555 | 99.6 | Plus |
X | 23542271 | X | 11359240..11359537 | 4..301 | 1490 | 100 | Plus |
X | 23542271 | X | 11360575..11360678 | 1137..1240 | 280 | 84.6 | Plus |
X | 23542271 | X | 11360440..11360543 | 1272..1375 | 250 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 2515..2615 | 1125..1018 | 118 | 61.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11250401..11250701 | 1..301 | 98 | -> | Plus |
chrX | 11250768..11252091 | 302..1627 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11750-RA | 1..369 | 93..461 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11750-RA | 1..369 | 93..461 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pa1-RA | 1..369 | 93..461 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11750-RA | 1..369 | 93..461 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pa1-RA | 1..369 | 93..461 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11750-RA | 2..1627 | 2..1627 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11750-RA | 2..1627 | 2..1626 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pa1-RA | 2..1628 | 1..1626 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11750-RA | 2..1627 | 2..1627 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pa1-RA | 2..1628 | 1..1626 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11359237..11359537 | 1..301 | 99 | -> | Plus |
X | 11359604..11360929 | 302..1627 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11359237..11359537 | 1..301 | 99 | -> | Plus |
X | 11359604..11360929 | 302..1627 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11359237..11359537 | 1..301 | 99 | -> | Plus |
X | 11359604..11360929 | 302..1627 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11253270..11253570 | 1..301 | 99 | -> | Plus |
arm_X | 11253637..11254962 | 302..1627 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11367335..11367635 | 1..301 | 99 | -> | Plus |
X | 11367702..11369027 | 302..1627 | 99 | Plus |
Translation from 92 to 460
> RH21749.hyp MATDVEPAANTADKFSANAEELEGYYLMLEAGNIPELQWQFPGRRAPSPE AGSGGNSKELEQATDAIEQEPQKANDFDFSDDVAPTQMRVRSQTSTPKSA KKKTANFAGVMETLKKKNAESS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pa1-PA | 122 | CG11750-PA | 1..122 | 1..122 | 623 | 100 | Plus |
Translation from 92 to 460
> RH21749.pep MATDVEPAANTADKFSANAEELEGYYLMLEAGNIPELQWQFPGRRAPSPE AGSGGNSKELEQATDAIEQEPQKANDFDFSDDVAPTQMRVRSQTSTPKSA KKKTANFAGVMETLKKKNAESS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21770-PA | 127 | GF21770-PA | 1..127 | 1..122 | 509 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18409-PA | 122 | GG18409-PA | 1..122 | 1..122 | 624 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12182-PA | 121 | GH12182-PA | 1..121 | 1..122 | 512 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pa1-PA | 122 | CG11750-PA | 1..122 | 1..122 | 623 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15712-PA | 121 | GI15712-PA | 1..121 | 1..122 | 508 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14852-PA | 121 | GL14852-PA | 1..121 | 1..122 | 575 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11173-PA | 121 | GA11173-PA | 1..121 | 1..122 | 575 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11475-PA | 122 | GM11475-PA | 1..122 | 1..122 | 632 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17018-PA | 122 | GD17018-PA | 1..122 | 1..122 | 635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15241-PA | 121 | GJ15241-PA | 1..121 | 1..122 | 520 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25333-PA | 122 | GK25333-PA | 1..122 | 1..122 | 527 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15928-PA | 122 | GE15928-PA | 1..122 | 1..122 | 626 | 98.4 | Plus |