Clone RH21780 Report

Search the DGRC for RH21780

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:217
Well:80
Vector:pFlc-1
Associated Gene/Transcriptdally-RA
Protein status:RH21780.pep: gold
Preliminary Size:3422
Sequenced Size:4497

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4974 2003-01-01 Sim4 clustering to Release 3
CG4974 2004-01-09 Blastp of sequenced clone
dally 2008-04-29 Release 5.5 accounting
dally 2008-08-15 Release 5.9 accounting
dally 2008-12-18 5.12 accounting

Clone Sequence Records

RH21780.complete Sequence

4497 bp (4497 high quality bases) assembled on 2004-01-09

GenBank Submission: BT011348

> RH21780.complete
GAATCTGTTCGGGTTTCTCGTCGTGGAAGGTTCGTTGCGCGCGCGGAAAA
ACTGAAAATATCGGTGCGAAATTCGAGCGGAAAAACGCTAGAAAAGAAGG
CGAGTGCATTTCCTCGACCTGAGAACGCCGGTGGCCAAGGAGCTTTGCAA
TTAAATCTATTTTCGCCGACCTAAGTACACAAAACGTAGGAGAAAATTAA
AAAGAAGAAAAAAAAAACAAATCTAATCGCTGGCAAATCAATTGCTAAGG
AATTGAGTACTATTCGTTGTTATGTCATGGAAAGTCTCTGAATAAGTTAA
GAAAATACTTGTGAGAAATTTAGCGACCTTTCAAAACTAGAAAGTAGAAA
AGCAAAAAGTGCTAGACACGCGCTCTCTCTTCGACCACCACCCACCACCA
CCCACTATCGCCATCCCACGTTTACTACCACGTTTATTGCTCACGCGTGT
TTTTGGGGCCTTTTGTTTTGTGCGCTCGTGTTTGTGGCCGTGTGTGCCAG
TGTGTGTGTGTGCGTGTTAGCCGGCAAGTGCATTTGTGTGAGTGTGTGTG
TTTGTTGCCGCGAACAGCTGTTCACCCAGACAGCATGCAGAAGTAAATAC
GAAGAAGTGCTGCAAAATAGAGTAAATAAAATAACCGGCTAAAATAAAAA
TAAGAGAAGCATTCAAAGGCAAATCAAATTTAGCCCCATCATCCACTGTG
TCTGCACACAGAAATCACCCATCAAAAATGGCGGCCAGGAGCGTGCGGCT
AGCGCAGCTTTTGCTATTTACCCTGCTCTGCGGCTTCGTCGGCCTGTCAG
CCGCCAAGCACCTGGACCTGGATGGTATCCACCACCACCAGCACCACCTG
CACAGCGCCACCACGCACCACAGACGTCGCCTACAGCGGGACTCGCGGGC
GAAGGACGCCGTTGGGGGATCGACCCACCAGTGTGATGCCGTCAAGAGCT
ACTTCGAATCGATCGACATCAAGTCGAGTGGGACTTACAGCGAAAAAGGC
GCCATTTGTGGCGGAAACTGCTGCAACAATGCCACGGAGCTGGAGCTGCG
GGACAAAGCCGCCGGAATGTTCGAGCAACTGCTTCATCATCACACCAGCA
GCCTGCGCGGAGTCCTCGAGACGAATGCCAAACAGTTCCAAAGTCACGTC
CTGGAATTGGCGCAGATTTCGGAGAACATGACCCACTCGCTCTTTTCGAA
GGTTTATACCCGTATGGTGCCTTCATCGCGTATGATGATCCATCAACTGT
ACACCGAAATCATGAACCATCTGATTTACACCTCCAACTATACGAACAGC
AATGGCCAACTGGGCAGGCGAGGAATTGGCAGTGTCCAGAGCAACTTGGA
GGAGGCTGTCAGGCACTTCTTTGTTCAGTTGTTCCCCGTGGCCTACCACC
AGATGGTCCATCTGTCCAAGAACAATTTGGGTGACTTGCACGAGGACTAC
GTTAACTGCCTGCAGCACAACTTCGACGAGATGCATCCATTCGGGGACAT
TCCCCAGCAAGTGCAGTCCAACTTGGGCAAGAGTGTCCATATGTCCAATG
TCTTCATGAATGCCCTGCTCCAGGCCGCCGAGGTCCTCAGCGAAGCGGAT
GCCCTTTATGGCGAACAACTGACGGACACGTGCAAACTGCATCTCCTCAA
GATGCACTACTGCCCCAACTGCAATGGACACCATTCAAGTTCTAGGAGCG
AAACGAAATTGTGCTACGGCTACTGCAAGAACGTAATGCGCGGCTGTTCG
GCGGAATATGCCGGACTACTGGACAGTCCCTGGTCAGGTGTAGTCGACTC
CCTGAACAATCTGGTCACCACCCATATTCTCTCGGACACCGGCATCATTA
ATGTCATCAAACACCTGCAGACTTATTTCTCTGAGGCAATCATGGCTGCC
ATGCACAATGGGCCTGAACTGGAAAAAAAGGTAAAGAAGACATGTGGCAC
GCCCAGCCTGACGCCCTATTCGTCCGGAGAACCGGATGCGCGGCCTCCGC
CCCACAAGAACAACGTAAAGTGGGCCACTGACCCGGATCCGGGCATGGTC
CTCTTCCTGTCCACCATCGACAAGAGCAAGGAGTTCTACACGACCATCGT
GGACAACTTCTGCGATGAGCAACAGCACTCTCGTGACGATCACTCCTGCT
GGTCAGGCGATCGTTTCGGGGACTACACTCAGCTGCTGATTAATCCGGGC
ACTGATAGCCAGCGATATAATCCCGAGGTGCCCTTCAATGCGAAGGCTCA
GACCGGCAAGCTGAACGAGCTGGTCGACAAGCTCTTCAAGATTCGCAAGA
GCATTGGAGCTGCGGCACCTTCCAACAGCATACAGGCGACGCACGACATC
CAGAATGATATGGGTGAGGGCTCCGGCGGCGGAGAAGGTCAGATCGGCGA
CGATGAGGAGGAGTATGGAGGCGCACATGGTTCCGGAGATGGTTCCGGCG
ATGGACCCCATACGCCCATCGAGGAATCCGAAGGCACCACCACCAACGAA
GTGGAGTCGCGTGACAGCGGCAAGACCAGTGGGTCCAACCCACTGGAAGG
CACCGCGACGTGGATGCTCCTCACTCTAGTCACAATGCTCTTTAGTAGCT
GTAGTTAAGGATGCTGCCCCAGCCCAAGGGATTGAACACAAAAAACGCAA
TGCCCCCCACTGTGCGAGGGCAATGAATGATGTAACCAGAAGAAGAGCAA
CAGCAGATGCACACGAATCGAGTTAAATCATTAATTAATAACTATTATCA
TTATTATTATTATTTGTGTAATTCTTAAGTTGTTACAAGTAATTTATAGG
CCCTAAGCGCATTCATCTAGCAATCGACTAACAACTTTACAAACCAGAAG
CGAACCGTGAAACCCTTGAAGTGCACCTCTCCTTCTAGCTTTTCCAAATT
TGATGCTCATCGAACTTCCATGCCGAATCCAACTAGACTTGTGTGCCATA
TAAATGCGTTGGATATTTGCATACGAATCGAGAAATTGCTAAACACAACT
AACTAAAAACGAAAATTAAACTAAATAGGCTCGCAATCAAGCAGAATCCC
TTTTCCATAGAGTGTGCAGTTTGTTCAGATACATGTTAATATATATAGCG
TACAGTACACAAAGCTCAATGTTCAAAGCAAGTTGTTCCTTTTCGGTGTA
ATTACACAAGTAAACAGATCTAAAATCAGAGGCGTGGCACCACATTCAAT
TGCTAGGTTTTTTGGGGGCGATCACAATATATTATATACGTAAAGGATAT
AAATCTGTTAGCTGTAGCTCAGTGAATGTTAAACTAAAATGAAATTATTG
TTGTCTACACCTTTCGAACTGAACGAATGCGAACAATTTTGAAATTGATC
AATTGGGTAATCGAAATGCGAAATGCATACGAATGGAATTTAGTTGAGTA
AACGCACGGAAAAACTAGAAGACTTACAGCTTTATACGCAAACAAAAACG
AAAAAAAAAACGAAGGCAAATCGATGAAAATCTATTGATATATTAATACG
TATATTATATGTAGCATTACTTAAATTATATGAACAAAGAGAGAAGACGA
CCTTGGGGGGATAACAAATGGAAAAAATGTCATACAATGCATTCAGCTAA
TTAGAGTTCACAGAGCACTTGGATTTCTTCTTGGGGAGAGAGTGCAGAAA
ATGCAGAGTTCAGCGCACAAATCACAGTTCGCAAATTTGCAATTTCAATC
GAAACTAATGTTGCAATCTTACGGATACTTTACAGTGGGGCAGAGCGCTG
CTGAATCAAATCCAGAGAGCAGCGCTGGCGGCACTCTAAAAAAAAAAACA
AGTAAATATATATATATACAAATGAATATGAAATATGCATTAAAACGAGT
ATGGCGCCAGCGATAAGAATGCAGTCTATATATATACATATATATATATA
TAAATACATAAATGAATTAACTAATTAAATCGTAATTATATGCTAGTGCG
TAAACGTAACGATTAGCGCGTAATGTGTAAAAAGCAAACAGTTGAACGAA
AACAACAAATTTAGTTAGTAGCAAATTAACAAAGGAAACGCCAACTGCCG
CCGCACACAAATTGGCATATAGGCATATATACATACATATATCGCATATA
CACTTCGATTCGATCGAAATTAGATCGTATTGTGCCGGCGAGCTGGTTGA
ACTATGTATAATTATTATTTGTATCATTATTATTTAACTATTGCATGTGA
TTAATAATATTTAAGTTAAACGTAACGCAACATATTAAATTGTAACTCGT
TGTAAATCTATTCGGAGATAACCAATGCGAATCGAAAATTGCACTAAAAA
TAAATGTACTACTTTTAGATGCCTAAAAACCAATAAATAATTATGTAACA
AAAAACGCAAGTCCAAGAAGTTTATTGAAAGCGATACGCAATAGTGCTAT
GAGTGTAACGGCAGACAAGCGAAAATGAGAACTTTTGTAAATTTCATTTA
AAACCTGAATAAACGTCAATATTTGAAATCCAAAAAAAAAAAAAAAA

RH21780.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:11:08
Subject Length Description Subject Range Query Range Score Percent Strand
dally-RA 4510 dally-RA 28..4510 2..4483 22330 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:24:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8881162..8883193 2453..4479 9920 99.6 Plus
chr3L 24539361 chr3L 8819484..8820483 2..999 4845 99.2 Plus
chr3L 24539361 chr3L 8878499..8878972 1267..1740 2280 98.7 Plus
chr3L 24539361 chr3L 8880652..8880860 2107..2315 1045 100 Plus
chr3L 24539361 chr3L 8879097..8879289 1740..1932 920 98.4 Plus
chr3L 24539361 chr3L 8879958..8880135 1929..2106 890 100 Plus
chr3L 24539361 chr3L 8869164..8869311 997..1144 710 98.6 Plus
chr3L 24539361 chr3L 8880923..8881063 2314..2454 705 100 Plus
chr3L 24539361 chr3L 8878277..8878400 1143..1266 605 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:24:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8889163..8891195 2453..4484 10070 99.8 Plus
3L 28110227 3L 8827507..8828504 2..999 4990 100 Plus
3L 28110227 3L 8886497..8886970 1267..1740 2370 100 Plus
3L 28110227 3L 8888652..8888860 2107..2315 1045 100 Plus
3L 28110227 3L 8887096..8887290 1740..1934 975 100 Plus
3L 28110227 3L 8887957..8888134 1929..2106 890 100 Plus
3L 28110227 3L 8877156..8877303 997..1144 740 100 Plus
3L 28110227 3L 8888923..8889063 2314..2454 705 100 Plus
3L 28110227 3L 8886275..8886398 1143..1266 620 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8882263..8884295 2453..4484 10080 99.8 Plus
3L 28103327 3L 8820607..8821604 2..999 4990 100 Plus
3L 28103327 3L 8879597..8880070 1267..1740 2370 100 Plus
3L 28103327 3L 8881752..8881960 2107..2315 1045 100 Plus
3L 28103327 3L 8880196..8880390 1740..1934 975 100 Plus
3L 28103327 3L 8881057..8881234 1929..2106 890 100 Plus
3L 28103327 3L 8870256..8870403 997..1144 740 100 Plus
3L 28103327 3L 8882023..8882163 2314..2454 705 100 Plus
3L 28103327 3L 8879375..8879498 1143..1266 620 100 Plus
Blast to na_te.dros performed on 2019-03-15 20:24:28 has no hits.

RH21780.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:25:22 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8879960..8880135 1931..2106 100 -> Plus
chr3L 8880652..8880859 2107..2314 100 -> Plus
chr3L 8880924..8881062 2315..2453 100 -> Plus
chr3L 8819483..8819952 1..468 98 == Plus
chr3L 8820040..8820482 556..998 99 -> Plus
chr3L 8869166..8869309 999..1142 98 -> Plus
chr3L 8878277..8878400 1143..1266 99 -> Plus
chr3L 8878499..8878972 1267..1740 98 -> Plus
chr3L 8879098..8879287 1741..1930 98 -> Plus
chr3L 8881163..8883195 2454..4481 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:13:39 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 1..1881 728..2608 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:43:12 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 1..1881 728..2608 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:06:57 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 1..1881 728..2608 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:32:03 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 1..1881 728..2608 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:35:10 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 1..1881 728..2608 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:13:38 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 2..3439 2..3439 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:43:12 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 2..3439 2..3439 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:06:57 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RB 2..4483 1..4481 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:32:03 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RA 2..3439 2..3439 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:35:10 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
dally-RB 2..4483 1..4481 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:25:22 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8887097..8887286 1741..1930 100 -> Plus
3L 8887959..8888134 1931..2106 100 -> Plus
3L 8888652..8888859 2107..2314 100 -> Plus
3L 8888924..8889062 2315..2453 100 -> Plus
3L 8827506..8828503 1..998 99 -> Plus
3L 8877158..8877301 999..1142 100 -> Plus
3L 8886275..8886398 1143..1266 100 -> Plus
3L 8886497..8886970 1267..1740 100 -> Plus
3L 8889164..8891192 2454..4481 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:25:22 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8887097..8887286 1741..1930 100 -> Plus
3L 8887959..8888134 1931..2106 100 -> Plus
3L 8888652..8888859 2107..2314 100 -> Plus
3L 8888924..8889062 2315..2453 100 -> Plus
3L 8827506..8828503 1..998 99 -> Plus
3L 8877158..8877301 999..1142 100 -> Plus
3L 8886275..8886398 1143..1266 100 -> Plus
3L 8886497..8886970 1267..1740 100 -> Plus
3L 8889164..8891192 2454..4481 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:25:22 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8887097..8887286 1741..1930 100 -> Plus
3L 8887959..8888134 1931..2106 100 -> Plus
3L 8888652..8888859 2107..2314 100 -> Plus
3L 8888924..8889062 2315..2453 100 -> Plus
3L 8827506..8828503 1..998 99 -> Plus
3L 8877158..8877301 999..1142 100 -> Plus
3L 8886275..8886398 1143..1266 100 -> Plus
3L 8886497..8886970 1267..1740 100 -> Plus
3L 8889164..8891192 2454..4481 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:06:57 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8882024..8882162 2315..2453 100 -> Plus
arm_3L 8881752..8881959 2107..2314 100 -> Plus
arm_3L 8880197..8880386 1741..1930 100 -> Plus
arm_3L 8881059..8881234 1931..2106 100 -> Plus
arm_3L 8820606..8821603 1..998 99 -> Plus
arm_3L 8870258..8870401 999..1142 100 -> Plus
arm_3L 8879375..8879498 1143..1266 100 -> Plus
arm_3L 8879597..8880070 1267..1740 100 -> Plus
arm_3L 8882264..8884292 2454..4481 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:04:38 Download gff for RH21780.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8882024..8882162 2315..2453 100 -> Plus
3L 8881059..8881234 1931..2106 100 -> Plus
3L 8881752..8881959 2107..2314 100 -> Plus
3L 8820606..8821603 1..998 99 -> Plus
3L 8870258..8870401 999..1142 100 -> Plus
3L 8879375..8879498 1143..1266 100 -> Plus
3L 8879597..8880070 1267..1740 100 -> Plus
3L 8880197..8880386 1741..1930 100 -> Plus
3L 8882264..8884292 2454..4481 99   Plus

RH21780.pep Sequence

Translation from 727 to 2607

> RH21780.pep
MAARSVRLAQLLLFTLLCGFVGLSAAKHLDLDGIHHHQHHLHSATTHHRR
RLQRDSRAKDAVGGSTHQCDAVKSYFESIDIKSSGTYSEKGAICGGNCCN
NATELELRDKAAGMFEQLLHHHTSSLRGVLETNAKQFQSHVLELAQISEN
MTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQLGRRGI
GSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFD
EMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTD
TCKLHLLKMHYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDS
PWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSEAIMAAMHNGPELEK
KVKKTCGTPSLTPYSSGEPDARPPPHKNNVKWATDPDPGMVLFLSTIDKS
KEFYTTIVDNFCDEQQHSRDDHSCWSGDRFGDYTQLLINPGTDSQRYNPE
VPFNAKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSG
GGEGQIGDDEEEYGGAHGSGDGSGDGPHTPIEESEGTTTNEVESRDSGKT
SGSNPLEGTATWMLLTLVTMLFSSCS*

RH21780.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24360-PA 623 GF24360-PA 1..600 1..606 2114 72.9 Plus
Dana\GF24610-PA 776 GF24610-PA 71..388 69..411 284 25.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14354-PA 625 GG14354-PA 1..625 1..626 3031 95.5 Plus
Dere\GG15689-PA 774 GG15689-PA 118..399 96..411 266 24.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:31:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15331-PA 602 GH15331-PA 1..573 1..599 1766 60.1 Plus
Dgri\GH14753-PA 789 GH14753-PA 118..421 87..425 253 23.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
dally-PB 626 CG4974-PB 1..626 1..626 3342 100 Plus
dally-PA 626 CG4974-PA 1..626 1..626 3342 100 Plus
dlp-PC 764 CG32146-PC 116..397 96..411 256 24.7 Plus
dlp-PA 765 CG32146-PA 116..397 96..411 256 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12936-PA 651 GI12936-PA 71..626 43..599 1807 63.4 Plus
Dmoj\GI11494-PA 781 GI11494-PA 124..412 87..411 251 23.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10347-PA 528 GL10347-PA 184..528 282..626 1117 63.9 Plus
Dper\GL10347-PA 528 GL10347-PA 14..138 4..134 469 72.7 Plus
Dper\GL24494-PA 778 GL24494-PA 109..397 87..411 263 24.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18565-PA 514 GA18565-PA 1..514 114..626 1819 68.1 Plus
Dpse\GA28200-PA 180 GA28200-PA 14..124 4..119 266 55.9 Plus
Dpse\GA16712-PA 780 GA16712-PA 109..397 87..411 263 24.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:31:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25098-PA 625 GM25098-PA 1..625 1..626 3337 98.4 Plus
Dsec\GM25472-PA 644 GM25472-PA 1..275 107..411 257 25.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14134-PA 560 GD14134-PA 45..560 140..626 2552 92.5 Plus
Dsim\GD14132-PA 127 GD14132-PA 1..93 1..93 480 96.8 Plus
Dsim\GD14495-PA 813 GD14495-PA 108..444 87..411 222 22.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13077-PA 640 GJ13077-PA 63..615 43..599 1921 67 Plus
Dvir\GJ13689-PA 785 GJ13689-PA 125..413 87..411 243 23.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16744-PA 643 GK16744-PA 19..643 21..626 2006 64 Plus
Dwil\GK10530-PA 774 GK10530-PA 83..400 69..411 256 23.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20786-PA 627 GE20786-PA 1..627 1..626 3269 95.7 Plus
Dyak\GE22020-PA 766 GE22020-PA 112..397 92..411 267 24.7 Plus

RH21780.hyp Sequence

Translation from 727 to 2607

> RH21780.hyp
MAARSVRLAQLLLFTLLCGFVGLSAAKHLDLDGIHHHQHHLHSATTHHRR
RLQRDSRAKDAVGGSTHQCDAVKSYFESIDIKSSGTYSEKGAICGGNCCN
NATELELRDKAAGMFEQLLHHHTSSLRGVLETNAKQFQSHVLELAQISEN
MTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQLGRRGI
GSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFD
EMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTD
TCKLHLLKMHYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDS
PWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSEAIMAAMHNGPELEK
KVKKTCGTPSLTPYSSGEPDARPPPHKNNVKWATDPDPGMVLFLSTIDKS
KEFYTTIVDNFCDEQQHSRDDHSCWSGDRFGDYTQLLINPGTDSQRYNPE
VPFNAKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSG
GGEGQIGDDEEEYGGAHGSGDGSGDGPHTPIEESEGTTTNEVESRDSGKT
SGSNPLEGTATWMLLTLVTMLFSSCS*

RH21780.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
dally-PB 626 CG4974-PB 1..626 1..626 3342 100 Plus
dally-PA 626 CG4974-PA 1..626 1..626 3342 100 Plus
dlp-PC 764 CG32146-PC 116..397 96..411 256 24.7 Plus
dlp-PA 765 CG32146-PA 116..397 96..411 256 24.7 Plus