BDGP Sequence Production Resources |
Search the DGRC for RH22148
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 221 |
Well: | 48 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12025-RA |
Protein status: | RH22148.pep: gold |
Preliminary Size: | 825 |
Sequenced Size: | 1232 |
Gene | Date | Evidence |
---|---|---|
CG12025 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12025 | 2002-05-18 | Blastp of sequenced clone |
CG12025 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12025 | 2008-04-29 | Release 5.5 accounting |
CG12025 | 2008-08-15 | Release 5.9 accounting |
CG12025 | 2008-12-18 | 5.12 accounting |
1232 bp (1232 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119162
> RH22148.complete GACACAGTATTTAACCACCCCCGAGGAACGGTCACATTGCTGCGAGTCTG AATATTTTTTTGCTTTGTGTCGCGTTTTAATGTGAAAAGAAAAACACTTT TTCCACGGTTACGGGCGCAGAAATCAGTGCAAAACATTGCGAATACGGAG TGCCCGAAAATGCAGGCGGGGCAGCACTAAGTCGGAGCCGCATCTCCCCC GATTTCCGCCGTGCTGGCAGCCAACGTTGGCAGCCCGAATCCGAATCTCC AGCGCACTCGTTTATTATTAAACAACGGGCAACGGAAACAGGGAAAGAAA AACGCAGAGAATCCAAGCCAGAAAATATGTACAACAACGGGGCCAGGGGC TTCTCCATTCACGACGCCTTCGAGGAGGAGACCGACGAGGCGATACGCGT CTATGGCTCCACCGTGATATCCACGCCCATGAGAGGCAAGCAAGGTCGCT CCACCGAAGACGTCTCCATCCGGATTCAGGACCCCAAGGGCTACAACAAG TATGCCGAGGACACAACGTCCCGGGACAGCGACTCGCTCATCCAGGAGTA CGGCAACCTGCCCACGGAGGAGACCAACACATACTGCTGGCGGCATCCCA AGGTGCGTGAGAACTGGCGCACAGTGCTGGCCGCCTTTACGCTCCTGGTC GTGGGCACGGGCCTCTTTGTGATGGGCACCTTTGCCATCGCGGATCCGCA GAACACGTCGCAGGGAGTCGTGTTCTTCGTAGCGGGACTCATCTGCTTCA TACCCGGGGCCTATCACGTCGTGTACATCTGGCTGGCAGCCAAAGGATAT CGAGGGTTCGACTTCTATCACCTGCCGCTGTTCACATAAGCGTAAGCGGA CATCTGGACAGTCGAGCTGGTTGATCCATGGACGAAGAGAGTGGGAGAAG CCCCATCTATTAATATAAATCTGTGTTTGTTTATACCCGACCCGTATAAA CAACTTATTTTCTACATTGTAATCGTAATTAACTCGAAACTTGGTTTGTG TAACGTACTTTTTGTGTTTAGCGGCAAAAAATTTCGTTTAGACAAATATC CCTTACCCCTGAAATCCGAATTGAAATCTAGCAATATATAGATTATATAT TTTACAATATTTTCTATTATGTACTCGGTAAAGTGTTTTTTGTATGCCCC TTCTCCAAAACCGAACCCAAGAAAGCGAAAAACATTCATACGTACACTCG AAATTGATTTAAAAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
INE-1 | 611 | INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). | 255..293 | 117..79 | 114 | 76.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1864993..1865479 | 1..487 | 99 | -> | Plus |
chr3L | 1866703..1867431 | 488..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 1..513 | 327..839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 1..513 | 327..839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 1..513 | 327..839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 1..513 | 327..839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 1..513 | 327..839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 2..1216 | 2..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 1..1209 | 2..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RB | 2..1217 | 1..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RA | 2..1216 | 2..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12025-RB | 2..1217 | 1..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1865431..1865917 | 1..487 | 99 | -> | Plus |
3L | 1867141..1867869 | 488..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1865431..1865917 | 1..487 | 99 | -> | Plus |
3L | 1867141..1867869 | 488..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1865431..1865917 | 1..487 | 99 | -> | Plus |
3L | 1867141..1867869 | 488..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1865431..1865917 | 1..487 | 99 | -> | Plus |
arm_3L | 1867141..1867869 | 488..1216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1865431..1865917 | 1..487 | 99 | -> | Plus |
3L | 1867141..1867869 | 488..1216 | 99 | Plus |
Translation from 326 to 838
> RH22148.pep MYNNGARGFSIHDAFEEETDEAIRVYGSTVISTPMRGKQGRSTEDVSIRI QDPKGYNKYAEDTTSRDSDSLIQEYGNLPTEETNTYCWRHPKVRENWRTV LAAFTLLVVGTGLFVMGTFAIADPQNTSQGVVFFVAGLICFIPGAYHVVY IWLAAKGYRGFDFYHLPLFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24843-PA | 170 | GF24843-PA | 1..170 | 1..170 | 884 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14832-PA | 170 | GG14832-PA | 1..170 | 1..170 | 916 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16440-PA | 176 | GH16440-PA | 1..176 | 1..170 | 885 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12025-PC | 170 | CG12025-PC | 1..170 | 1..170 | 910 | 100 | Plus |
CG12025-PB | 170 | CG12025-PB | 1..170 | 1..170 | 910 | 100 | Plus |
CG12025-PA | 170 | CG12025-PA | 1..170 | 1..170 | 910 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16695-PA | 175 | GI16695-PA | 1..175 | 1..170 | 867 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25314-PA | 171 | GL25314-PA | 1..171 | 1..170 | 902 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11347-PA | 171 | GA11347-PA | 1..171 | 1..170 | 902 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14454-PA | 170 | GM14454-PA | 1..170 | 1..170 | 916 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13654-PA | 132 | GD13654-PA | 15..132 | 53..170 | 635 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12432-PA | 176 | GJ12432-PA | 1..176 | 1..170 | 877 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12199-PA | 179 | GK12199-PA | 1..179 | 1..170 | 867 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21195-PA | 170 | GE21195-PA | 1..170 | 1..170 | 916 | 100 | Plus |
Translation from 326 to 838
> RH22148.hyp MYNNGARGFSIHDAFEEETDEAIRVYGSTVISTPMRGKQGRSTEDVSIRI QDPKGYNKYAEDTTSRDSDSLIQEYGNLPTEETNTYCWRHPKVRENWRTV LAAFTLLVVGTGLFVMGTFAIADPQNTSQGVVFFVAGLICFIPGAYHVVY IWLAAKGYRGFDFYHLPLFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12025-PC | 170 | CG12025-PC | 1..170 | 1..170 | 910 | 100 | Plus |
CG12025-PB | 170 | CG12025-PB | 1..170 | 1..170 | 910 | 100 | Plus |
CG12025-PA | 170 | CG12025-PA | 1..170 | 1..170 | 910 | 100 | Plus |