BDGP Sequence Production Resources |
Search the DGRC for RH22417
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 224 |
Well: | 17 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11158-RA |
Protein status: | RH22417.pep: gold |
Preliminary Size: | 1035 |
Sequenced Size: | 1667 |
Gene | Date | Evidence |
---|---|---|
CG11158 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11158 | 2002-02-22 | Blastp of sequenced clone |
CG11158 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11158 | 2008-04-29 | Release 5.5 accounting |
CG11158 | 2008-08-15 | Release 5.9 accounting |
CG11158 | 2008-12-18 | 5.12 accounting |
1667 bp (1667 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089659
> RH22417.complete GATTGGGCGCGATAGTTCGTTCCGTAATCGATAGAAGCGGCAGCAAACCA GTTTGGAATAGCATTCGACATGGACAAGAAGCATCGCCTCGTGGTCTACG ACTGCGACATTGGGACCGATGATGCCTGGGGATTGGCCATGTTGCTGCGC GCGGAGGAGCTAACTCTGCGCGAAGGAAGGACCTGCAAAGTGTTGGCCAT AACAACGGTGCATGGCAACACGGATGCGGACAATGGAACACTGAATGCCC TGCGGGTGCTGCACACGTTGAACAGGCGCGATGTTCCGGTCTTTAGGGGC TGTTACGAATCCATAGTGCCACGCACTTGGGAGTATACCAACTGTTTCCA TGGCCAGGATGGCCTAAACGATGTGGGCAACTATCCTGTGGTCGATGTGG AGCAGGAACTGCAACCGGAGCACGCTGTCAATGCCATGTACCGCCTGGCC AGAGCTAATCCCGGCCAAGTGGACTTTCTGCTGTGCGGACCACTTACCAA CTTTGCCAACTGCATCAATTTGTATGGAAACTCATTTCTGACGAACATTG GTCGAGTCTATATAATGGGTGGCAACATATTCGGCAAGGGTAATGTCACG AAAAGTGCCGAATTCAATTTCATGATGGATCCCGAGGCGGCGCACATTAC CCTGGAGCGTCTGCTGGAACCGGCGATCATCCTGCCCTGGGAGCCCTGCA TCGATGGAGAGTTCGACACCACCCTCGACTGGCGACTGAATGTCCTCGGA GCGGTTGATCATCCCTTTATAGAGCTACTCACACGCGTGGAACGCTCCAT GCTGGAGCCGCGAGGATTCGTGAAGTGGATCAGTTGTGATTCCCTACTCA CCGCCGCCTATCTCTTCCCGGATGCGATGATCGCCGAACAGCGGCAGTAC TACGCCACCGTGGAGCTGAGTGGCATCCACACCCGTGGCCAGATGGTGCT GGATCACCTGCGCGGCCGGAAAGTGGACGACATTCATGGCAAGAAGATAA ATGTGCACATCATTAGGCGCCTCACTAGTGGAGCGACCTTCCGCACGATC ATCGCCTGGACGGGATTCCTTCCCAATGCCGATATCGCACAACTATGCGC TTAGCATCTTAAATATACATATCACGTTTACCGCAATTTCCAAAACCCTT TCATACGATTTATGGCCTGATAAGGCATCAGGTGATCTATGACTTGGCCA CAGATTATATTAAATGGACTGCGAAAGAATATGGTTGTAGATAGGGGGGT TAGTAGAGAGTCGAGCATGATGATAGCCCAATTACCGAGATATGTAAGTT AATAGCAATCACCTGTCATACGAGTGATTGGCCAAATGATCTCTTGCATC ACTATAGATTCTAGATGGAACCATCGTGTGTCCCGCCCACGTCCATTTGA AACTACAAAAATGTCTGGTGTATATATATTTCCTTCTACAGAAGTGTATA ATCAGTGTTCCATTAAATCGATCTGATGCGAGTGTTCAAATTCACAATGT GCTATAAATCTACATGCTTGACTACCAACAAAAAAGAACAAAAAAAAAAG TAATGCCCATTTCCCAAGGAAGTGTTTTCAAAGATTGGGAATTAGCATTA GCTACATTGGTCTTACGTTCATACATAAAATATAATTTACAATTCAGAAA GGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11158-RA | 1753 | CG11158-RA | 94..1748 | 2..1655 | 8235 | 99.9 | Plus |
CG9940-RA | 4378 | CG9940-RA | 4262..4377 | 1655..1540 | 580 | 100 | Minus |
CG9940-RB | 4242 | CG9940-RB | 4134..4242 | 1655..1547 | 545 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13573975..13575345 | 283..1652 | 6805 | 99.9 | Plus |
chrX | 22417052 | chrX | 13573637..13573919 | 2..284 | 1415 | 100 | Plus |
chr2L | 23010047 | chr2L | 12450811..12451430 | 1013..394 | 385 | 70.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13683246..13684619 | 283..1655 | 6820 | 99.9 | Plus |
X | 23542271 | X | 13682908..13683190 | 2..284 | 1415 | 100 | Plus |
2L | 23513712 | 2L | 12452170..12452789 | 1013..394 | 385 | 70.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13691344..13692717 | 283..1655 | 6830 | 99.9 | Plus |
X | 23527363 | X | 13691006..13691288 | 2..284 | 1415 | 100 | Plus |
2L | 23513712 | 2L | 12452170..12452327 | 1013..856 | 235 | 76.5 | Minus |
2L | 23513712 | 2L | 12452477..12452622 | 706..561 | 190 | 75.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13573636..13573917 | 1..282 | 99 | -> | Plus |
chrX | 13573975..13575345 | 283..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 1..1035 | 70..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 1..1035 | 70..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 1..1035 | 70..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 1..1035 | 70..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 1..1035 | 70..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 2..1653 | 2..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 2..1653 | 2..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 1..1608 | 46..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 2..1653 | 2..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11158-RA | 1..1608 | 46..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13682907..13683188 | 1..282 | 99 | -> | Plus |
X | 13683246..13684616 | 283..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13682907..13683188 | 1..282 | 99 | -> | Plus |
X | 13683246..13684616 | 283..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13682907..13683188 | 1..282 | 99 | -> | Plus |
X | 13683246..13684616 | 283..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13576940..13577221 | 1..282 | 99 | -> | Plus |
arm_X | 13577279..13578649 | 283..1652 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13691005..13691286 | 1..282 | 99 | -> | Plus |
X | 13691344..13692714 | 283..1652 | 99 | Plus |
Translation from 69 to 1103
> RH22417.pep MDKKHRLVVYDCDIGTDDAWGLAMLLRAEELTLREGRTCKVLAITTVHGN TDADNGTLNALRVLHTLNRRDVPVFRGCYESIVPRTWEYTNCFHGQDGLN DVGNYPVVDVEQELQPEHAVNAMYRLARANPGQVDFLLCGPLTNFANCIN LYGNSFLTNIGRVYIMGGNIFGKGNVTKSAEFNFMMDPEAAHITLERLLE PAIILPWEPCIDGEFDTTLDWRLNVLGAVDHPFIELLTRVERSMLEPRGF VKWISCDSLLTAAYLFPDAMIAEQRQYYATVELSGIHTRGQMVLDHLRGR KVDDIHGKKINVHIIRRLTSGATFRTIIAWTGFLPNADIAQLCA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22595-PA | 358 | GF22595-PA | 12..351 | 2..343 | 1357 | 72.8 | Plus |
Dana\GF22351-PA | 366 | GF22351-PA | 30..363 | 6..341 | 601 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17802-PA | 344 | GG17802-PA | 1..344 | 1..344 | 1704 | 91.3 | Plus |
Dere\GG19494-PA | 369 | GG19494-PA | 32..364 | 6..339 | 575 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11940-PA | 343 | GH11940-PA | 6..339 | 2..337 | 586 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11158-PA | 344 | CG11158-PA | 1..344 | 1..344 | 1838 | 100 | Plus |
CG5418-PA | 355 | CG5418-PA | 7..347 | 3..343 | 1220 | 67.5 | Plus |
CG12177-PC | 362 | CG12177-PC | 25..325 | 6..301 | 583 | 41.2 | Plus |
CG12177-PB | 362 | CG12177-PB | 25..325 | 6..301 | 583 | 41.2 | Plus |
CG12177-PA | 362 | CG12177-PA | 25..325 | 6..301 | 583 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14015-PA | 334 | GI14015-PA | 4..329 | 1..334 | 585 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19860-PA | 356 | GL19860-PA | 12..349 | 7..343 | 1283 | 71.7 | Plus |
Dper\GL19853-PA | 360 | GL19853-PA | 23..356 | 6..339 | 592 | 40.1 | Plus |
Dper\GL19857-PA | 288 | GL19857-PA | 3..284 | 62..339 | 520 | 40 | Plus |
Dper\GL18288-PA | 195 | GL18288-PA | 1..191 | 151..339 | 365 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10803-PA | 356 | GA10803-PA | 12..349 | 7..343 | 1290 | 72 | Plus |
Dpse\GA11456-PA | 360 | GA11456-PA | 23..356 | 6..339 | 596 | 40.3 | Plus |
Dpse\GA28143-PA | 178 | GA28143-PA | 3..165 | 62..222 | 310 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17628-PA | 344 | GM17628-PA | 1..343 | 1..343 | 1797 | 97.7 | Plus |
Dsec\GM26185-PA | 355 | GM26185-PA | 10..347 | 6..343 | 1204 | 68.7 | Plus |
Dsec\GM17597-PA | 361 | GM17597-PA | 24..351 | 6..334 | 556 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17140-PA | 321 | GD17140-PA | 1..321 | 24..344 | 1673 | 97.2 | Plus |
Dsim\GD22117-PA | 355 | GD22117-PA | 10..347 | 6..343 | 1199 | 68.4 | Plus |
Dsim\GD15879-PA | 361 | GD15879-PA | 24..354 | 6..337 | 553 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25813-PA | 354 | GK25813-PA | 11..347 | 8..342 | 1239 | 68.3 | Plus |
Dwil\GK11421-PA | 351 | GK11421-PA | 10..338 | 8..342 | 1196 | 68.7 | Plus |
Dwil\GK25228-PA | 335 | GK25228-PA | 3..302 | 6..298 | 572 | 41.9 | Plus |
Translation from 69 to 1103
> RH22417.hyp MDKKHRLVVYDCDIGTDDAWGLAMLLRAEELTLREGRTCKVLAITTVHGN TDADNGTLNALRVLHTLNRRDVPVFRGCYESIVPRTWEYTNCFHGQDGLN DVGNYPVVDVEQELQPEHAVNAMYRLARANPGQVDFLLCGPLTNFANCIN LYGNSFLTNIGRVYIMGGNIFGKGNVTKSAEFNFMMDPEAAHITLERLLE PAIILPWEPCIDGEFDTTLDWRLNVLGAVDHPFIELLTRVERSMLEPRGF VKWISCDSLLTAAYLFPDAMIAEQRQYYATVELSGIHTRGQMVLDHLRGR KVDDIHGKKINVHIIRRLTSGATFRTIIAWTGFLPNADIAQLCA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11158-PA | 344 | CG11158-PA | 1..344 | 1..344 | 1838 | 100 | Plus |
CG5418-PA | 355 | CG5418-PA | 7..347 | 3..343 | 1220 | 67.5 | Plus |
CG12177-PC | 362 | CG12177-PC | 25..325 | 6..301 | 583 | 41.2 | Plus |
CG12177-PB | 362 | CG12177-PB | 25..325 | 6..301 | 583 | 41.2 | Plus |
CG12177-PA | 362 | CG12177-PA | 25..325 | 6..301 | 583 | 41.2 | Plus |