BDGP Sequence Production Resources |
Search the DGRC for RH23185
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 231 |
Well: | 85 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Atg10-RB |
Protein status: | RH23185.pep: full length peptide match |
Preliminary Size: | 1751 |
Sequenced Size: | 3487 |
Gene | Date | Evidence |
---|---|---|
CG12822 | 2008-04-29 | Release 5.5 accounting |
CG12821 | 2008-08-15 | Release 5.9 accounting |
CG12822 | 2008-08-15 | Release 5.9 accounting |
CG12821 | 2008-12-18 | 5.12 accounting |
CG12822 | 2008-12-18 | 5.12 accounting |
3487 bp (3487 high quality bases) assembled on 2005-08-09
GenBank Submission: BT023823
> RH23185.complete GTGCGTTTGAGACAGGCAAATTGCCATGAGTGTCCTTTTGCTACTGGTAT AGTTCAGTTCACACCGATTTTGCCTTGACCATGATGCAGGCAGCAAGTGC GCAACCTGCAGCATGTGCAGCGCAAGGACATTGAGACGATAACCCGCCTG CTGCAGGACTTCCGCTGCGAGGGGTGTGCGAACAACAACAAAAGCGCCAA GGACAAGGTCGCCGGCGAGAAGCAGGAGCACCAGCACCAACAGCAGACGC AGGACCAGCAGACGGGCCAAGGTCAGAGCAATTATACCAATGGTGGGCAC TGCTTGGGAGAGGACTACGCACACTTTCGGCCCATAGGAGTGATCCGGAC AGCATTCCCAGAGAAGCGGGCCGTGCCGAGGCAGTCAATTGTGGGCAGTC GCCTGCGGGGTATCATCCAACTGAACGACGGTGTGTTCACCAATCCGGAG CACTCCTTGGAGGGACTAGAGGACTTTTCCCATCTGTGGCTCATCTATCA TTTTCACCGCAACAATTCCCACCCCAAGGCCAAGGTGGCGCCTCCCCGTC TTGGTGGGGAGCGGGTGGGTGTGTTTTCCACACGATCTCCACACCGCCCG TGTCCCATTGGTCTCTCGTTGGTGGAGATTGAGAAGATCGAGAACGCCAC CATTAGTTTCTTTGGTACGGACATGGTAGACGGCACACCCGTGTTGGACA TTAAGCCCTACATTCCACACTACGATGCACCATCCTTGAGCGTTGACTCA GGAAGAACCTCTGTTGGACCGCATGAGAGCAGCCTGGACTTCTACGACTC CAGACAGGAGCCTGACGGAGAGGAATCGGACCTGGAACTGTATGGAGCAG CTGGCTACAGCGGGAACGCGGGCATTGGAGCTGACGCTATTCTGCCGCCA CCCAGCGCCGTGCGAGTGCCCAACTGGGTGGTGGCCAGCAATAGACTTAG CGTGACCTTTAACGAGCATGCCGAGGCGCAGTTAAAGGAGCTGCAGGTGG AGAAGCAGTGCATCGTGGACATTCTGGAGGCGGATCCGCGCTCCGTTTAC TTGCGCACAAAATATGGCTCGCAAATATTTACCTTCCAGCTGCGGGAGGT CACGGTGACGTGCAAATTTGATGACAAGGCCGGCACGGTGACTGTGGTTC AGGTCCGGCGCAACGAGAATGTCCAGGTTACCGCCCTGGACGGCGACCTG CGCAGCGCCTAACTTATGGATTATTGCAATTGATATTCGTTAATTGACGA TTTGTGTTAAGCTTAAGTGTATTGTGTTGAGGAGCTTTAACCTTTGGCGT TTCAATTTTGCTCTAGAATACAGGACATTCTTAAATATGTATGAGGCTTG TTTCCCACGCAAAAGAAATTGTTTTCTTTCAAGTATCGTTACGCGTGGGT ATTTGAAGTGTTTAAAGATTTTAACACGCATATTTTTGTGCTTTATTTTC AGCATTATGGGCGACTTGAGCTGGAAAGATTTTTTGAGCCAGGCCAAGCA GTTCCTCGAAATTTCGCAGAAGTTGGGTGATAATTGGATATTGGAACAAA AGGACTCGAATGAACCAAACACCTATCTCAAATGTAGTCAGAAGATTAAA TGCCGAGGTGGCAAGGACAACTCGGCTGAGTTGGTTAGTGTGGAGTACCA TGTGGTCTTCAGTGTTTCCTATCAAGTACCAATGTTGTTCTTCCAGGCAC ACAGATCAGATGGAAGTCTTTTGGATGTGGAGGCCACTTGGCGAATGTTC ATGCCCGAATCGAAGGCCAGCGATCTCCACCAGATACTCACCCAGATGGA TCACCCGGTGCTTTTCAGACCCTTTATGGCATTGCATCCATGCCGCACCG CCGAAGTGCTAAAGCAGTTCGGAAAGCCCAGCTGCAACCAGGTGCTTACC TTCATCAGTCTGTACGGACCCCACGTGCAGTTGCACCTGCAAAATGCGTA CGGCTTAAGCCAAGAGTATACGTAATTTGAATTTATTGGTGGTTTTTTTT AAACACTGGTTATAGGAGTATACATGTATGGATAATATGGCTTATGCCCT TTTACAGTTTTACATTTCGTTCCCTATTTTAGAGTGGTTACACCTTAACT GGGGACCCCATCGCCACCAGTTCTTGGCACAAGTGAAGATCCATGGGGCA CAGGGTCGTACCATGTGACATGACACCTGAAGCAGCACATCACATGGATA ATTTAAGTTAAAAATGAAAAACTAATGAAGTTACGAAAGGAACCCAGCTT TGTACACAGGTTATAACTCCGCTTAGTGAATACATTCAACTACTTAGGCA TTATTTATCGCTTAACGTAGTGTATAGTTTTCAAGTTCCACTTGCTATTT TCGTTATTTTTTCTCGGCTAATATCAACTAGTAGCTACTTTTCGATTACT TCGATTTAACATTAGACAGGTATACGCTTACATCTAGTTGTACTGTACAC AAGCGTGGCCTTGCTGAGCCGCTTTGCTTTGCATTTTACTAATATTAAGT GGTTCATTTATAATTAATGTTAACTGGCTACTGTGTGGCATTAGCGGCGT CCCGGCGCTGGCACCAAAACCCCGTGTTCCATGCGGAACCGAGGACTCGT GGGCGCGGGGAATCGCATTGAAAATGTTTATTTGCAAAATTAAATCGACT TTTATGTATATTACGTTGGTTTGCAATAGTAGTTCGACAGTATACAAGAG TCCACGTACATTAAGGATTAATCGTGTGCAGTGCGGATATCCTGCTGAGG AAGTCTAAGGTCGGTTAGGATGGCACGTACGAGGAGAACTCAATTTGGAC TCGGAAAATGGCTAGGATATCTCGACGCGCTCCATAACATTAGGTGTGAA GTGTTTGTAAAAACTATGGTTAGTCTTCGAAGTAAGCTTTAATATTCCGA ACTACTTAGGGGGAGTAACGATTCGAAGGACACATATTATATTGCGAGTA TATCCAATTAACATTCCATCTGAGCAGTGCCTCTCATATTACCTAATAAT TCAAAAATAGTGCTCTTTGGTTTCGTGCCATTCAATAACTATCAGCTAGT AGTTATTTGATTCTAGGGATACTACGTTTAACAAACAAGATTATTGGTGA TTTCACTTTACCAGATTTGCACTACTTCGTGCTTTGCGTCTAAAAATGTA CACGTGGTCTGGGAAATGCTTGGAATGTGGTTTTTCGATTTGAAATTTTT CCTGGGCGGTTAAATTTACTGATGGGGGTGAGAAAAGGCTTGGGACAGGG TATTCTTCTATGAGTATTGTATTTGTGAGGACCTTATGGCACTTAACAAA CATATACGACTATACGAAATATATATGCTATGTATGTATTGTTCAACATC CGGTTTGTGTCATCTCAATATATGTGTTCATATATAAAATTTCGTTTAAA GCTGCACCATTTAGTTGACACTTGCATCATGCCAAGTTACATTTGTTTCG CTATATACAATATAAATTACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12821-RC | 3474 | CG12821-RC | 1..3474 | 1..3471 | 17200 | 99.8 | Plus |
CG12821.a | 1973 | CG12821.a | 598..1973 | 2083..3457 | 6840 | 99.9 | Plus |
CG12821.b | 1750 | CG12821.b | 598..1750 | 2083..3235 | 5765 | 100 | Plus |
CG12821.a | 1973 | CG12821.a | 24..597 | 1451..2025 | 2835 | 99.8 | Plus |
CG12821.b | 1750 | CG12821.b | 24..597 | 1451..2025 | 2835 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3721632..3723395 | 1708..3471 | 8680 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 3720549..3721355 | 749..1553 | 3970 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 3720021..3720498 | 275..752 | 2390 | 100 | Plus |
chr2R | 21145070 | chr2R | 3716577..3716853 | 1..276 | 1335 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 3719687..3719963 | 1..276 | 1335 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 3716911..3717171 | 275..535 | 1305 | 100 | Plus |
chr2R | 21145070 | chr2R | 3721417..3721576 | 1550..1709 | 800 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7834311..7836090 | 1708..3487 | 8790 | 99.8 | Plus |
2R | 25286936 | 2R | 7833228..7834034 | 749..1553 | 3970 | 99.8 | Plus |
2R | 25286936 | 2R | 7832700..7833177 | 275..752 | 2390 | 100 | Plus |
2R | 25286936 | 2R | 7829256..7829532 | 1..276 | 1335 | 99.6 | Plus |
2R | 25286936 | 2R | 7832366..7832642 | 1..276 | 1335 | 99.6 | Plus |
2R | 25286936 | 2R | 7829590..7829850 | 275..535 | 1305 | 100 | Plus |
2R | 25286936 | 2R | 7834096..7834255 | 1550..1709 | 800 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7835510..7837289 | 1708..3487 | 8810 | 99.8 | Plus |
2R | 25260384 | 2R | 7834427..7835233 | 749..1553 | 3980 | 99.7 | Plus |
2R | 25260384 | 2R | 7833899..7834376 | 275..752 | 2390 | 100 | Plus |
2R | 25260384 | 2R | 7833565..7833841 | 1..276 | 1345 | 99.6 | Plus |
2R | 25260384 | 2R | 7830455..7830731 | 1..276 | 1345 | 99.6 | Plus |
2R | 25260384 | 2R | 7830789..7831049 | 275..535 | 1305 | 100 | Plus |
2R | 25260384 | 2R | 7835295..7835454 | 1550..1709 | 800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3719687..3719963 | 1..276 | 99 | -> | Plus |
chr2R | 3720023..3720497 | 277..751 | 100 | -> | Plus |
chr2R | 3720552..3721354 | 752..1552 | 99 | -> | Plus |
chr2R | 3721420..3721576 | 1553..1709 | 100 | -> | Plus |
chr2R | 3721634..3723395 | 1710..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12822-RB | 53..1185 | 78..1212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12822-RB | 53..1185 | 78..1212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12822-RB | 53..1185 | 78..1212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12822-RB | 53..1185 | 78..1212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12822-RB | 53..1185 | 78..1212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12821-RC | 1..3474 | 1..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12821-RC | 1..3474 | 1..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12821-RD | 52..1516 | 1451..2916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12821-RC | 1..3474 | 1..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atg10-RD | 52..1516 | 1451..2916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7832366..7832642 | 1..276 | 99 | -> | Plus |
2R | 7832702..7833176 | 277..751 | 100 | -> | Plus |
2R | 7833231..7834033 | 752..1552 | 99 | -> | Plus |
2R | 7834099..7834255 | 1553..1709 | 100 | -> | Plus |
2R | 7834313..7836074 | 1710..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7832366..7832642 | 1..276 | 99 | -> | Plus |
2R | 7832702..7833176 | 277..751 | 100 | -> | Plus |
2R | 7833231..7834033 | 752..1552 | 99 | -> | Plus |
2R | 7834099..7834255 | 1553..1709 | 100 | -> | Plus |
2R | 7834313..7836074 | 1710..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7832366..7832642 | 1..276 | 99 | -> | Plus |
2R | 7832702..7833176 | 277..751 | 100 | -> | Plus |
2R | 7833231..7834033 | 752..1552 | 99 | -> | Plus |
2R | 7834099..7834255 | 1553..1709 | 100 | -> | Plus |
2R | 7834313..7836074 | 1710..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3719871..3720147 | 1..276 | 99 | -> | Plus |
arm_2R | 3720207..3720681 | 277..751 | 100 | -> | Plus |
arm_2R | 3720736..3721538 | 752..1552 | 99 | -> | Plus |
arm_2R | 3721604..3721760 | 1553..1709 | 100 | -> | Plus |
arm_2R | 3721818..3723579 | 1710..3471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7833565..7833841 | 1..276 | 99 | -> | Plus |
2R | 7833901..7834375 | 277..751 | 100 | -> | Plus |
2R | 7834430..7835232 | 752..1552 | 99 | -> | Plus |
2R | 7835298..7835454 | 1553..1709 | 100 | -> | Plus |
2R | 7835512..7837273 | 1710..3471 | 99 | Plus |
Translation from 1336 to 1974
> RH23185.pep MYEACFPRKRNCFLSSIVTRGYLKCLKILTRIFLCFIFSIMGDLSWKDFL SQAKQFLEISQKLGDNWILEQKDSNEPNTYLKCSQKIKCRGGKDNSAELV SVEYHVVFSVSYQVPMLFFQAHRSDGSLLDVEATWRMFMPESKASDLHQI LTQMDHPVLFRPFMALHPCRTAEVLKQFGKPSCNQVLTFISLYGPHVQLH LQNAYGLSQEYT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13639-PA | 166 | GF13639-PA | 1..166 | 41..212 | 727 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23309-PA | 171 | GG23309-PA | 1..171 | 41..212 | 863 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21294-PA | 174 | GH21294-PA | 10..169 | 44..207 | 610 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atg10-PD | 172 | CG12821-PD | 1..172 | 41..212 | 916 | 100 | Plus |
Atg10-PB | 172 | CG12821-PB | 1..172 | 41..212 | 916 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19784-PA | 114 | GI19784-PA | 1..109 | 102..210 | 448 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20628-PA | 96 | GL20628-PA | 11..96 | 124..209 | 380 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25591-PB | 166 | GA25591-PB | 1..166 | 44..209 | 698 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20987-PA | 172 | GM20987-PA | 1..172 | 41..212 | 874 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10514-PA | 172 | GD10514-PA | 1..172 | 41..212 | 861 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17730-PA | 174 | GJ17730-PA | 3..164 | 42..207 | 620 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21969-PA | 191 | GK21969-PA | 1..187 | 41..209 | 550 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19154-PA | 172 | GE19154-PA | 1..172 | 41..212 | 857 | 90.7 | Plus |
Translation from 1338 to 1974
> RH23185.hyp MYEACFPRKRNCFLSSIVTRGYLKCLKILTRIFLCFIFSIMGDLSWKDFL SQAKQFLEISQKLGDNWILEQKDSNEPNTYLKCSQKIKCRGGKDNSAELV SVEYHVVFSVSYQVPMLFFQAHRSDGSLLDVEATWRMFMPESKASDLHQI LTQMDHPVLFRPFMALHPCRTAEVLKQFGKPSCNQVLTFISLYGPHVQLH LQNAYGLSQEYT*