RH26422.complete Sequence
635 bp (635 high quality bases) assembled on 2009-01-15
GenBank Submission: AY089663.1
> RH26422.complete
GATATAGTGCAAAAAGCTCTACTCGCGTTCACTTCGCATCCGCTCGCCGC
ATTCCCGTCCGCACCCGGAGTAGTGTCCAGTCACTCGTCACTCGTCCCGA
TTTCCCGCAAGAGAGCAAGCAACAGCATGTGGTCGAAAATTGCCATCGCC
GGAGCCCTGCTCGTGATGGGTGGCGTCCTGTCCTCCAGCGTGGTGGACAA
CTTCGCCTACGTGGATCGCTCGCTGCCGGTGGCCATGCCCAAGGCAAAGG
CCTTCCAAGTGAAACAGGAGTGAGGATCCCAGGAGGAGGGGGTTTTCTCA
AGTGGATCCCGACTGGCTGTGTCGATTAGGCAGTTCCTGGAGCAGGAACC
CCGTGCTCTTCACTCGGCAGCTGGGATATCTACTGGCCAGCCGGCTACTC
TGGCTTGTGTTTGAGCTACAAGTTGACCACAAGTGGGAAATAGTTGGTGC
AGGTCATCAAGTCGATGCACCCGCTGGGAAGCCACCTCCTTGCCCATAGG
AACAATTCGAGCACTAAACTTTAATTTAGATATATTTTTTTTTTTTGTTA
ACTTAATGTGACTAATTTAAGGAGTTCCCTATGCGTAAGCAATAAATAAG
TTAAACTTGACTGTCAAACGAAAAAAAAAAAAAAA
RH26422.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:19:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34330-RA | 620 | CG34330-RA | 3..620 | 4..622 | 3055 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:31:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 18957219..18957830 | 620..4 | 2910 | 98.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:25:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:31:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19068273..19068890 | 622..4 | 3045 | 99.8 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:36:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 19076371..19076988 | 622..4 | 3055 | 99.8 | Minus |
Blast to na_te.dros performed on 2019-03-16 02:31:24 has no hits.
RH26422.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:32:29 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 18957219..18957832 | 1..620 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:44:03 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 1..147 | 127..273 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:28:21 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 1..147 | 127..273 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:00:31 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 1..147 | 127..273 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:17:22 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 1..147 | 127..273 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:13:51 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 1..147 | 127..273 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-15 09:52:24 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 3..618 | 4..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:28:21 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 3..618 | 4..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:00:31 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 3..618 | 4..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:17:22 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 3..618 | 4..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:13:51 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34330-RA | 3..618 | 4..620 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:32:29 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19068275..19068892 | 1..620 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:32:29 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19068275..19068892 | 1..620 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:32:29 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19068275..19068892 | 1..620 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:00:31 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18962308..18962925 | 1..620 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:01:06 Download gff for
RH26422.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19076373..19076990 | 1..620 | 99 | | Minus |
RH26422.pep Sequence
Translation from 0 to 272
> RH26422.pep
DIVQKALLAFTSHPLAAFPSAPGVVSSHSSLVPISRKRASNSMWSKIAIA
GALLVMGGVLSSSVVDNFAYVDRSLPVAMPKAKAFQVKQE*
RH26422.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34330-PB | 48 | CG34330-PB | 1..48 | 43..90 | 235 | 100 | Plus |
CG34330-PA | 48 | CG34330-PA | 1..48 | 43..90 | 235 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:22:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM22774-PA | 48 | GM22774-PA | 1..48 | 43..90 | 240 | 97.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:22:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15608-PA | 48 | GD15608-PA | 1..48 | 43..90 | 240 | 97.9 | Plus |
RH26422.hyp Sequence
Translation from 2 to 328
> RH26422.hyp
HSAKSSTRVHFASARRIPVRTRSSVQSLVTRPDFPQESKQQHVVENCHRR
SPARDGWRPVLQRGGQLRLRGSLAAGGHAQGKGLPSETGVRIPGGGGFLK
WIPTGCVD*
Sequence RH26422.hyp has no blast hits.