BDGP Sequence Production Resources |
Search the DGRC for RH31156
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 311 |
Well: | 56 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG42678-RK |
Protein status: | RH31156.pep: gold |
Sequenced Size: | 1947 |
Gene | Date | Evidence |
---|---|---|
CG30190 | 2005-01-26 | Blastp of sequenced clone |
CG30190 | 2008-04-29 | Release 5.5 accounting |
CG30190 | 2008-08-15 | Release 5.9 accounting |
CG30193 | 2008-08-15 | Release 5.9 accounting |
CG30190 | 2008-12-18 | 5.12 accounting |
CG30193 | 2008-12-18 | 5.12 accounting |
1947 bp (1947 high quality bases) assembled on 2005-01-26
GenBank Submission: BT021231
> RH31156.complete GATTCCGCCACTTCCACTCGGCCATCGCCGTTGTCGCCTTCCCAGCTGCC CAGTTGTATAGTTGCATAGTTGCACAATTCTAATTCCAATTCCGAATCGC CTCCTAGGGGAGGCGGCAATCTGGTGCAGACGATCAAGCGGAGCTACAGC CTCAGCGATCTTAGCGAACCGGATATGCATCGCACGCAGGACGAGCTGGA CGACGTGATGATGTCCTCGATGACATCGTCGGCGGTGGTCATGCGTTCCA CAGCCACTGGCGCACGTCTACTGAGGCCAAGAAATCAGACGCCCGTGGGC AGATCCGGCAGCGGAACACGCCACTCCACGGGCATGTATTTTACGGAGGT GGATGTGACCGCCAAGAATGCCGGCGATTTCAACTACAACATTCGCAGCC AGGATGACATCAGCTCTGGCTACTCGAGCGCCGAACCTGTGAGTGGTCTC AGTCGCACCTCCTCCATGACAAACGCTTCCAAGGCTCGAGCCAAGTCCAA ACGCAATGAGTTGCTGGAAGAGATGAGAGACGAGGTCTACTTAGACAACC AGCTGTATTTTCAAGGTGTGCAAAGGAAGAGCTCAGTTCCAGAAGCTGAA GAACTGAAAATAGTGGAGAGTTCTGAAAGCATCCAATCTCAGGAGTTGGA AAAGGTGCTGAAGGAGGAGAACATTGATGCAGAAGATGAGGCCTTTTTTG AAACCTTGCCTTTGATAGAGGAGCACATAAATGAAGTGGTGGCTAACTAT GGAAGGGATGAAAAGTTGTTGCCCCAAGAGCGGAAGCATAATTCGATAGA AGAGGAGCAGTTTGAAGATGCATTGTTTGAGGAACCACAGAAATGTGTCT CAGATGAAGTGGATGCTAAAAATATTGAGGAGATACTAACGGATAGAAGT CAAAACCAGACTCCGAATGGATCTGCTGAAACTACTGATTCAGGAACACC TTCCCAAAACAAGCCCTATGTCCATCCACCGATAGACCCATTTTTGCTGG TTCTAAGCGCTTCTGCATCTGCTCCGGATCCCTTTATGCCCGAACGGCCG CGTCCAATGTCGCCGCGTGAAATGCGCGAGACTCTGGAGGAGATTAAGCA CAGTTTCCGTGCCCAACTGGAAGCAGAGCCCTCCGTATCAGCCTCACCAT CACCCTCCTTGCGGCCCAAGGCCAACCATGGCAAGGGACGAGCTCCACCA CCGCCCTTGCCACCCAAGAAGCACTCATTGAGTCCCCAACCGGACGCCAT CAGCCAGACATCGACGGGCAGCGTGGAACGCAAGTCAGGTATCGGACAAC TGTTCAAGAATATCAAAGCTAATGTGCTGCGTAACAAAGCTAATCCCAGC CAGCAGCAGCCCGAGGATGAGCAGCTGGCGGCCAAAGAGACACAGATTTG AAGACAAATCCATGTCTGCTAGCTGCACCACCTTGCCCCGCTCGAGCAGC CGGAAATCGGAGAGATCCCAGGGTGGAACTGCCACTGGCCAGATGAAAAC GCGCAACAAGTCGGAGAAGTAGTGGAGCATCGGTTTAAGGCTGCCCATCT TTGTCAGTATGTTGATTTAGATGGTGACGGTGGGCAGACAGTGGAATCCA TAGAACCAGAACCTCATGTTTTAGTTTAAATTGTAACTTTATACGGATAT CGATACAGATTATGATAATATTAGCTATATATGCGCATGCACTGTGTACT TTGTTTGTGATTCTATTAGAGCTCCGGGCGCAGTTCGTCCTGGTTGCCAC TGGTACTCACTTCGTGACTAGTTTAGCGTTAAGCGAGTCTCCTAGCCTCT AACCAAAGGTTCTGCAACAGATGTACTAACCAAAAATGAAACCCGAAGAA ACCTATCAATTGTGTAGCATAAATTCCTAATATTGTAATTGAACATTAAA TAAAAGAATCTATACCATTGATCCATTGAACTAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30190-RA | 1933 | CG30190-RA | 3..1933 | 2..1932 | 9625 | 99.8 | Plus |
CG30190-RC | 2549 | CG30190-RC | 2018..2549 | 1399..1930 | 2615 | 99.4 | Plus |
CG30190-RB | 972 | CG30190-RB | 441..972 | 1399..1930 | 2615 | 99.4 | Plus |
CG30190-RC | 2549 | CG30190-RC | 1619..2021 | 108..510 | 2015 | 100 | Plus |
CG30190-RB | 972 | CG30190-RB | 42..444 | 108..510 | 2015 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18816908..18817802 | 509..1403 | 4460 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 18818036..18818565 | 1403..1932 | 2590 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 18816319..18816594 | 108..383 | 1380 | 100 | Plus |
chr2R | 21145070 | chr2R | 18816707..18816840 | 377..510 | 655 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 18815255..18815366 | 2..113 | 545 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22930387..22931281 | 509..1403 | 4475 | 100 | Plus |
2R | 25286936 | 2R | 22931515..22932044 | 1403..1932 | 2620 | 99.6 | Plus |
2R | 25286936 | 2R | 22929798..22930073 | 108..383 | 1380 | 100 | Plus |
2R | 25286936 | 2R | 22930186..22930319 | 377..510 | 655 | 99.3 | Plus |
2R | 25286936 | 2R | 22928734..22928845 | 2..113 | 545 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22931586..22932480 | 509..1403 | 4475 | 100 | Plus |
2R | 25260384 | 2R | 22932714..22933243 | 1403..1932 | 2620 | 99.6 | Plus |
2R | 25260384 | 2R | 22930997..22931272 | 108..383 | 1380 | 100 | Plus |
2R | 25260384 | 2R | 22931385..22931518 | 377..510 | 655 | 99.2 | Plus |
2R | 25260384 | 2R | 22929933..22930044 | 2..113 | 545 | 99.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18815253..18815361 | 1..108 | 99 | -> | Plus |
chr2R | 18816320..18816594 | 109..383 | 100 | -> | Plus |
chr2R | 18816714..18816840 | 384..510 | 100 | -> | Plus |
chr2R | 18816910..18817801 | 511..1402 | 99 | -> | Plus |
chr2R | 18818036..18818565 | 1403..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30190-RA | 1..1227 | 175..1401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42678-RI | 850..2151 | 99..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42678-RH | 409..1710 | 99..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30190-RA | 1..1227 | 175..1401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42678-RH | 409..1710 | 99..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30190-RA | 1..1933 | 1..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42678-RK | 1..1931 | 2..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42678-RK | 1..1931 | 2..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30190-RA | 1..1933 | 1..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42678-RK | 1..1931 | 2..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22928732..22928840 | 1..108 | 99 | -> | Plus |
2R | 22929799..22930073 | 109..383 | 100 | -> | Plus |
2R | 22930193..22930319 | 384..510 | 100 | -> | Plus |
2R | 22930389..22931280 | 511..1402 | 100 | -> | Plus |
2R | 22931515..22932044 | 1403..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22928732..22928840 | 1..108 | 99 | -> | Plus |
2R | 22929799..22930073 | 109..383 | 100 | -> | Plus |
2R | 22930193..22930319 | 384..510 | 100 | -> | Plus |
2R | 22930389..22931280 | 511..1402 | 100 | -> | Plus |
2R | 22931515..22932044 | 1403..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22928732..22928840 | 1..108 | 99 | -> | Plus |
2R | 22929799..22930073 | 109..383 | 100 | -> | Plus |
2R | 22930193..22930319 | 384..510 | 100 | -> | Plus |
2R | 22930389..22931280 | 511..1402 | 100 | -> | Plus |
2R | 22931515..22932044 | 1403..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18816255..18816363 | 1..108 | 99 | -> | Plus |
arm_2R | 18817322..18817596 | 109..383 | 100 | -> | Plus |
arm_2R | 18817716..18817842 | 384..510 | 100 | -> | Plus |
arm_2R | 18817912..18818803 | 511..1402 | 100 | -> | Plus |
arm_2R | 18819038..18819567 | 1403..1932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22931016..22931290 | 109..383 | 100 | -> | Plus |
2R | 22931410..22931536 | 384..510 | 100 | -> | Plus |
2R | 22931606..22932497 | 511..1402 | 100 | -> | Plus |
2R | 22932732..22933261 | 1403..1932 | 99 | Plus | |
2R | 22929949..22930057 | 1..108 | 99 | -> | Plus |
Translation from 174 to 1400
> RH31156.pep MHRTQDELDDVMMSSMTSSAVVMRSTATGARLLRPRNQTPVGRSGSGTRH STGMYFTEVDVTAKNAGDFNYNIRSQDDISSGYSSAEPVSGLSRTSSMTN ASKARAKSKRNELLEEMRDEVYLDNQLYFQGVQRKSSVPEAEELKIVESS ESIQSQELEKVLKEENIDAEDEAFFETLPLIEEHINEVVANYGRDEKLLP QERKHNSIEEEQFEDALFEEPQKCVSDEVDAKNIEEILTDRSQNQTPNGS AETTDSGTPSQNKPYVHPPIDPFLLVLSASASAPDPFMPERPRPMSPREM RETLEEIKHSFRAQLEAEPSVSASPSPSLRPKANHGKGRAPPPPLPPKKH SLSPQPDAISQTSTGSVERKSGIGQLFKNIKANVLRNKANPSQQQPEDEQ LAAKETQI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13557-PA | 192 | GF13557-PA | 47..179 | 1..133 | 643 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22817-PA | 411 | GG22817-PA | 1..411 | 1..408 | 1806 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20968-PA | 381 | GH20968-PA | 1..381 | 1..408 | 641 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ReepA-PK | 408 | CG42678-PK | 1..408 | 1..408 | 2075 | 100 | Plus |
ReepA-PI | 716 | CG42678-PI | 309..716 | 1..408 | 2075 | 100 | Plus |
ReepA-PH | 569 | CG42678-PH | 162..569 | 1..408 | 2075 | 100 | Plus |
ReepA-PJ | 570 | CG42678-PJ | 162..570 | 1..408 | 2063 | 99.8 | Plus |
ReepA-PQ | 685 | CG42678-PQ | 309..680 | 1..372 | 1896 | 100 | Plus |
ReepA-PP | 538 | CG42678-PP | 162..533 | 1..372 | 1896 | 100 | Plus |
ReepA-PL | 151 | CG42678-PL | 1..112 | 1..112 | 560 | 100 | Plus |
ReepA-PS | 312 | CG42678-PS | 162..273 | 1..112 | 560 | 100 | Plus |
ReepA-PR | 459 | CG42678-PR | 309..420 | 1..112 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21305-PA | 436 | GI21305-PA | 1..409 | 1..408 | 686 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16267-PA | 389 | GL16267-PA | 1..389 | 1..408 | 1009 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30269-PA | 550 | GA30269-PA | 162..550 | 1..408 | 978 | 60.2 | Plus |
Dpse\GA30269-PF | 425 | GA30269-PF | 1..372 | 1..393 | 976 | 61.8 | Plus |
Dpse\GA30269-PE | 389 | GA30269-PE | 1..389 | 1..408 | 975 | 60.2 | Plus |
Dpse\GA30269-PG | 693 | GA30269-PG | 305..693 | 1..408 | 972 | 60.2 | Plus |
Dpse\GA30269-PD | 153 | GA30269-PD | 1..111 | 1..112 | 504 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15974-PA | 452 | GM15974-PA | 45..452 | 1..408 | 1834 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11726-PA | 453 | GD11726-PA | 46..453 | 1..408 | 1898 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21571-PA | 404 | GJ21571-PA | 1..404 | 1..408 | 636 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19543-PA | 423 | GK19543-PA | 1..423 | 1..408 | 778 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14250-PA | 413 | GE14250-PA | 1..413 | 1..408 | 1781 | 85.5 | Plus |
Translation from 174 to 1400
> RH31156.hyp MHRTQDELDDVMMSSMTSSAVVMRSTATGARLLRPRNQTPVGRSGSGTRH STGMYFTEVDVTAKNAGDFNYNIRSQDDISSGYSSAEPVSGLSRTSSMTN ASKARAKSKRNELLEEMRDEVYLDNQLYFQGVQRKSSVPEAEELKIVESS ESIQSQELEKVLKEENIDAEDEAFFETLPLIEEHINEVVANYGRDEKLLP QERKHNSIEEEQFEDALFEEPQKCVSDEVDAKNIEEILTDRSQNQTPNGS AETTDSGTPSQNKPYVHPPIDPFLLVLSASASAPDPFMPERPRPMSPREM RETLEEIKHSFRAQLEAEPSVSASPSPSLRPKANHGKGRAPPPPLPPKKH SLSPQPDAISQTSTGSVERKSGIGQLFKNIKANVLRNKANPSQQQPEDEQ LAAKETQI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42678-PK | 408 | CG42678-PK | 1..408 | 1..408 | 2075 | 100 | Plus |
CG42678-PH | 569 | CG42678-PH | 162..569 | 1..408 | 2075 | 100 | Plus |
CG42678-PI | 716 | CG42678-PI | 309..716 | 1..408 | 2075 | 100 | Plus |
CG42678-PJ | 570 | CG42678-PJ | 162..570 | 1..408 | 2063 | 99.8 | Plus |
CG42678-PP | 538 | CG42678-PP | 162..533 | 1..372 | 1896 | 100 | Plus |