BDGP Sequence Production Resources |
Search the DGRC for RH31634
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 316 |
Well: | 34 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Dro-RA |
Protein status: | RH31634.pep: gold |
Preliminary Size: | 195 |
Sequenced Size: | 775 |
Gene | Date | Evidence |
---|---|---|
CG10816 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10816 | 2003-01-01 | Sim4 clustering to Release 3 |
Dro | 2008-04-29 | Release 5.5 accounting |
Dro | 2008-08-15 | Release 5.9 accounting |
Dro | 2008-12-18 | 5.12 accounting |
775 bp (775 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113579.1
> RH31634.complete GAATCAGTTCGATTTGTCCACCACTCCAAGCACAATGAAGTTCACCATCG TTTTCCTGCTGCTTGCTTGCGTTTTTGCCATGGGTGTGGCCACTCCCGGC AAGCCACGCCCCTACAGCCCACGCCCCACCTCCCATCCCCGCCCCATTCG GGTGAGGCGCGAGGCACTGGCCATCGAGGATCACCTGACTCAAGCTGCCA TCAGGCCACCACCCATTCTGCCCGCCTAAAGATGTGTGCATACCGCGGAG AAGTCATCCGATCAAATTTGTTTTGAAAAATCTTTATAAAAATTGTGAAT TTTTTACTTTCTGCAAACAGTAAGCAATAAACACACGAAAGACAGCAATT AATAATCTTCAATCAATTGTGACACAATGAGGGGTTCCCATCGCTTATCA GCGGTTTTTGTACCGAATCTGCTGAGCTCTAGAGCTGATAAGAAATATAC TTGCTCAAAACAAAACCACAAAAGTCACGTTTGAGAGAAAAAAAGCCTAA ACGAATTTAATTCGCGACTCATATGAATCACAAACCTGTTCTATAGCACG TTCTTCTTAAATTCTAGCGAAATAACCAGATGGCTGCAAATCATAATGAA TGGGTTTGTCCCCTAAAAAAAACGAACTGACAAGCCCCCTTATAAAACTT ATTTATTAATAGATTAGTTCGTATATAATTGCATATGTAAATACTTTAAA TAGAACAAATTATTACGACATTTAAAAATATATATCCTGGTTTTTAAAAA CAGGGTTTGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dro-RA | 361 | Dro-RA | 2..361 | 2..361 | 1785 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10633240..10633997 | 2..759 | 3640 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14745957..14746721 | 2..766 | 3810 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14747156..14747920 | 2..766 | 3810 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FB | 1106 | FB DMTNFB 1106bp AKA(J01084) Derived from V00246 (g8708) (Rel. 36, Last updated, Version 3). | 479..525 | 688..734 | 118 | 72.3 | Plus |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 3742..3800 | 679..735 | 110 | 67.8 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 4996..5092 | 430..523 | 108 | 59.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10633239..10633997 | 1..759 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 1..195 | 35..229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 1..195 | 35..229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 1..195 | 35..229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 1..195 | 35..229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 1..195 | 35..229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 2..759 | 2..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 2..361 | 2..361 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RB | 1..754 | 6..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RA | 2..759 | 2..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dro-RB | 1..754 | 6..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14745956..14746714 | 1..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14745956..14746714 | 1..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14745956..14746714 | 1..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10633461..10634219 | 1..759 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14747155..14747913 | 1..759 | 99 | Plus |
Translation from 0 to 275
> RH31634.hyp KSVRFVHHSKHNEVHHRFPAACLRFCHGCGHSRQATPLQPTPHLPSPPHS SEARGTGHRGSPDSSCHQATTHSARLKMCAYRGEVIRSNLF*
Translation from 1 to 228
> RH31634.pep NQFDLSTTPSTMKFTIVFLLLACVFAMGVATPGKPRPYSPRPTSHPRPIR VRREALAIEDHLTQAAIRPPPILPA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11338-PA | 68 | GF11338-PA | 1..67 | 12..74 | 269 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20474-PA | 64 | GG20474-PA | 1..63 | 12..74 | 294 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dro-PB | 64 | CG10816-PB | 1..64 | 12..75 | 335 | 100 | Plus |
Dro-PA | 64 | CG10816-PA | 1..64 | 12..75 | 335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11457-PA | 68 | GL11457-PA | 1..68 | 12..75 | 208 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10577-PA | 68 | GA10577-PA | 1..68 | 12..75 | 210 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21566-PA | 64 | GM21566-PA | 1..64 | 12..75 | 311 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Dro-PA | 64 | GD11071-PA | 1..64 | 12..75 | 301 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19342-PA | 56 | GK19342-PA | 1..44 | 12..54 | 164 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13605-PA | 64 | GE13605-PA | 1..64 | 12..75 | 295 | 92.2 | Plus |