BDGP Sequence Production Resources |
Search the DGRC for RH33377
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 333 |
Well: | 77 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10646-RA |
Protein status: | RH33377.pep: gold |
Preliminary Size: | 1152 |
Sequenced Size: | 1408 |
Gene | Date | Evidence |
---|---|---|
CG10646 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10646 | 2002-02-27 | Blastp of sequenced clone |
CG10646 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10646 | 2008-04-29 | Release 5.5 accounting |
CG10646 | 2008-08-15 | Release 5.9 accounting |
CG10646 | 2008-12-18 | 5.12 accounting |
1408 bp (1408 high quality bases) assembled on 2002-02-27
GenBank Submission: AY089665
> RH33377.complete GACTTTTAGGTACGCCGTTTAGTGTACGTAAGTTGCGTACCTAGATATCC AGCGAAATCAAAACATTGAGTAAATCGTGGAAAATGGATGAAAATAGCTT AATCTACGGACTCGAACTGCAGGCGCGGGCTTTAACACCTCAGTACGGAG AGAGCAACGATGTGTGCTTCTTCATAGCCACCAACTCCTTGAAGCCCACC AATCAGGTTCACTTAATCCAGTACGAGGAGGAGCAGGGATCCGTGCAATC AAAGGTCTTTGAGCACGCCCTGGGTGAAGTTTGGAAACTAAATAGTTGTC CGCGTAATCCTCGCCTGCTGGCCTCCGTCTACAATGTACAAAAGGGAGCA CAAGTGCTGACCAAAGCGGCTCTGTTTACGCTGCCCGAGAATCTCAATCC CGATCCGGAGCAGCTGAAGTCAGAGTACCTGCCGTGGGAGCAGGTTGAGG TCCTGGATACCGAAGCACTGGGCGAACGTGTGAAGACCATCGAATTCCAT CCCAACCAGGACACACTCGCCTGTGTGGTGGACAACAAGGTGGCTGTGAT GCAGCGGGCCGAGTCCTCTACTCGCGTGGTGGCCGAGGTGCCGGCCAGTG GTTCATCCAGTGGATCTGCAAAGCACACACAGCATTTCACCAGCGGCAAG TGGTCGCATCATCATCAGGGCCACCAGTTTCTCACCCTCCAGGATGGCAA TCTAAGTGCCTACGATGTGCGGGATACACAGCATTGTGCCTGGAGCATCA ACGATGCGCATGGTCAAATGGTCCGTGACCTGGACTGCAATCCCAACAAG CAGTGCCATTTGGTCACCGGCGGTGACGATGGCTACTTGAGGATCTGGGA CTGTCGCATGCCCAAGGCTCCCGTTTTCGAGCGCTCCGATCATTCGCATT GGGTCTGGTGCGTTCGCTTCAACACATTCCACGACCAACTGATCCTCTCC AGCTCCAGTGACTGCAAGGTGCTGCTCACGTGTGCGGGATCGGTTAGTTC GGAGACGCAGGTTCAGGCTGGACTAGATGAGTCCAACTTCAGTGGTGCCG ATGCCGAGGAGAGGCACAAACTCTTGCCAGATGGTCTGCTGCAGACCTTC GATCAGCACGAGGACTCCGTTTACTGCGCGGAGTGGAGCAATGTGGATCC GTGGATCTTTGCTTCGCTCAGCTACGATGGTCGCGTCATAATCTCAAAGG TGCCCAAGCAGTACAAGTACCAGATTATATTTTAAGCCATTAGTTTCTTA AATTATTACGCATATTTCATTTAAATCTAACTAAACAAATTGTGTCCTTG TATGTAGTAGCAGGTTATACAAATATTAAACCAATAAGTTATTATATGAA GATAAATATATCGAGGGACTAAAGCTAATTAGGCTTAACCTGTAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10646-RA | 1430 | CG10646-RA | 38..1430 | 2..1394 | 6950 | 99.9 | Plus |
nc_12253.a | 302 | nc_12253.a | 1..245 | 559..315 | 1225 | 100 | Minus |
CG10681.a | 1027 | CG10681.a | 846..1027 | 1394..1213 | 895 | 99.4 | Minus |
nc_12253.a | 302 | nc_12253.a | 238..302 | 124..60 | 310 | 98.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12493073..12494211 | 255..1393 | 99 | <- | Minus |
chr3L | 12494263..12494515 | 1..254 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1152 | 84..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1152 | 84..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1152 | 84..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1152 | 84..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1152 | 84..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1392 | 2..1393 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1392 | 2..1393 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1377 | 17..1393 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1392 | 2..1393 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10646-RA | 1..1377 | 17..1393 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12502467..12503605 | 255..1393 | 99 | <- | Minus |
3L | 12503657..12503909 | 1..254 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12502467..12503605 | 255..1393 | 99 | <- | Minus |
3L | 12503657..12503909 | 1..254 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12502467..12503605 | 255..1393 | 99 | <- | Minus |
3L | 12503657..12503909 | 1..254 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12495567..12496705 | 255..1393 | 99 | <- | Minus |
arm_3L | 12496757..12497009 | 1..254 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12495567..12496705 | 255..1393 | 99 | <- | Minus |
3L | 12496757..12497009 | 1..254 | 99 | Minus |
Translation from 83 to 1234
> RH33377.pep MDENSLIYGLELQARALTPQYGESNDVCFFIATNSLKPTNQVHLIQYEEE QGSVQSKVFEHALGEVWKLNSCPRNPRLLASVYNVQKGAQVLTKAALFTL PENLNPDPEQLKSEYLPWEQVEVLDTEALGERVKTIEFHPNQDTLACVVD NKVAVMQRAESSTRVVAEVPASGSSSGSAKHTQHFTSGKWSHHHQGHQFL TLQDGNLSAYDVRDTQHCAWSINDAHGQMVRDLDCNPNKQCHLVTGGDDG YLRIWDCRMPKAPVFERSDHSHWVWCVRFNTFHDQLILSSSSDCKVLLTC AGSVSSETQVQAGLDESNFSGADAEERHKLLPDGLLQTFDQHEDSVYCAE WSNVDPWIFASLSYDGRVIISKVPKQYKYQIIF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24012-PA | 382 | GF24012-PA | 1..382 | 1..383 | 1872 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13821-PA | 383 | GG13821-PA | 1..383 | 1..383 | 2028 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16847-PA | 383 | GH16847-PA | 1..383 | 1..383 | 1607 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10646-PA | 383 | CG10646-PA | 1..383 | 1..383 | 2057 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13067-PA | 382 | GI13067-PA | 1..382 | 1..383 | 1614 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24948-PA | 383 | GL24948-PA | 1..383 | 1..383 | 1794 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10465-PA | 383 | GA10465-PA | 1..383 | 1..383 | 1798 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24649-PA | 383 | GM24649-PA | 1..383 | 1..383 | 2044 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17577-PA | 206 | GD17577-PA | 1..203 | 1..203 | 1073 | 99 | Plus |
Dsim\GD12713-PA | 107 | GD12713-PA | 10..107 | 286..383 | 499 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13815-PA | 380 | GJ13815-PA | 1..380 | 1..383 | 1621 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12621-PA | 382 | GK12621-PA | 1..382 | 1..383 | 1550 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20115-PA | 380 | GE20115-PA | 1..380 | 1..383 | 1985 | 95.8 | Plus |
Translation from 83 to 1234
> RH33377.hyp MDENSLIYGLELQARALTPQYGESNDVCFFIATNSLKPTNQVHLIQYEEE QGSVQSKVFEHALGEVWKLNSCPRNPRLLASVYNVQKGAQVLTKAALFTL PENLNPDPEQLKSEYLPWEQVEVLDTEALGERVKTIEFHPNQDTLACVVD NKVAVMQRAESSTRVVAEVPASGSSSGSAKHTQHFTSGKWSHHHQGHQFL TLQDGNLSAYDVRDTQHCAWSINDAHGQMVRDLDCNPNKQCHLVTGGDDG YLRIWDCRMPKAPVFERSDHSHWVWCVRFNTFHDQLILSSSSDCKVLLTC AGSVSSETQVQAGLDESNFSGADAEERHKLLPDGLLQTFDQHEDSVYCAE WSNVDPWIFASLSYDGRVIISKVPKQYKYQIIF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10646-PA | 383 | CG10646-PA | 1..383 | 1..383 | 2057 | 100 | Plus |