BDGP Sequence Production Resources |
Search the DGRC for RH33703
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 337 |
Well: | 3 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Hex-C-RA |
Protein status: | RH33703.pep: gold |
Preliminary Size: | 1445 |
Sequenced Size: | 1592 |
Gene | Date | Evidence |
---|---|---|
CG8094 | 2001-12-17 | Blastp of sequenced clone |
CG8094 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8094 | 2003-01-01 | Sim4 clustering to Release 3 |
Hex-C | 2008-04-29 | Release 5.5 accounting |
Hex-C | 2008-08-15 | Release 5.9 accounting |
Hex-C | 2008-12-18 | 5.12 accounting |
1592 bp (1592 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071719
> RH33703.complete GGTTTCCAAGGCGCACTGCATCTCAACGCCTGGCTCTTATCAGGCACCCA GGGCAACTCCAAATCGCCGTGGGCTCGCCAGGCGCCTGGTTAGTCGTTAC TCATCGTTCGAGGCGGTTACAACTAAGGCAGATAGATTAGCCAAGCAAAA TGCTGGACGCGGAGGTGCGAGAACTTATGCAACCCTTTGTGTTGAGTGAT TACCAGGTGCAGGAAGTGTACAGTCGCTTTTGCCTGGAAGTGGCCCGTGG ACTTAAGCGGTCCACGCATCCACAGGCCAACGTCAAGTGTTTTCCCACGT ACGTGCAGGATCTGCCCACGGGCGACGAGATGGGCAAGTACCTGGCCCTG GATCTCGGCGGTACCAACTTCCGAGTACTGCTCGTCTCGCTGAAAGGTCA CCACGACGCCACGGTGGATTCTCAGATCTATGCCGTGCCAAAGGACCTGA TGGTGGGGCCCGGTGTGGACCTATTCGATCACATTGCGGGCTGCCTGGCC AAATTTGTGGAGAAACACGACATGAAGACCGCATATCTGCCACTGGGCTT CACTTTTTCCTTCCCTTGCGTGCAACTAGGCCTTAAGGAGGGCATCCTGG TACGCTGGACTAAGGGATTCGATTGTGCTGGGGTTGAGGGCGAGGATGTG GGCCGCATGCTGCACGAGGCCATTCAGCGGCGCGGAGATGCCGACATTGC CGTGGTGGCTATACTCAACGATACCACTGGCACCTTGATGTCCTGCGCCC ATCGTAATGCAGATTGCCGGGTGGGTGTCATTGTGGGAACTGGCTGCAAT GCCTGCTACGTTGAAGATGTTGAGAATGTGGACCTATTGCGCGCAGACTT TAAAAAAACGAAGCGGAGTGTGATTGTAAATGCTGAGTGGGGCGCCTTTG GTGAGGGTGGTCAGTTGGACTTTGTGCGCACCGAATACGATCGCGAAGTT GACGAAAAGTCTCTAAACCGATCGGAGCAGCTGTTCGAAAAGATGACGGC GGGCATGTACTTGGGCAACCTGGTGCGCCTTGTGCTACTTCGTGCCCTCG AGCGCAAGCTGATCTTTAAACAGAGCAGTCGACGTCCAGAATTCGCCAGC GTGCTGCAGAGAAACGAAGAGGTTTTCGAGACGCGCTACATTTCGGAAAT CGAGGACGACTCCTTCCCAGAGTTTGCCAGCACAAGGAAGATTGTGAAAA ATCTGTTTGGTCTAGAGAAGGCCTCCGTGGAGGACTGCCAGACTCTGAGA TACATCTGCGAGTGCGTAGCTAAGCGAGCGGCTACATTAGTAGCCATCGG AGTCAGTGGGCTGGTGAACAGGACTTCCAACCGCCGCGTGATAGTCGGCA TGGATGGCTCCGTCTACCGATACCATCCAAAGTTCGATGCCTACATGAGG CAAACACTCCAAAAGCTGGTGAAAGCAGACAAGGAGTGGGACATCATGCT CTCGGAGGACGGATCCGGACGTGGAGCTGCGCTGGTGGCCGCGGTGGCCA GTAAAACAAAGTAGGAACTCACTACTATTGTAGCAATAATAGAAGGACTC AGTGTAATAAAACAAATTTTAACTCACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hex-C-RA | 1578 | Hex-C-RA | 1..1578 | 2..1579 | 7875 | 99.9 | Plus |
Hex-A.a | 2520 | Hex-A.a | 719..835 | 267..383 | 210 | 78.6 | Plus |
Hex-A-RB | 2520 | Hex-A-RB | 719..835 | 267..383 | 210 | 78.6 | Plus |
Hex-A.a | 2520 | Hex-A.a | 1874..1927 | 1446..1499 | 150 | 85.1 | Plus |
Hex-A-RB | 2520 | Hex-A-RB | 1874..1927 | 1446..1499 | 150 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15220034..15221611 | 1579..2 | 7875 | 99.9 | Minus |
X | 23527363 | X | 9594701..9594817 | 267..383 | 210 | 78.6 | Plus |
X | 23527363 | X | 9595856..9595909 | 1446..1499 | 150 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 6266..6336 | 1500..1574 | 113 | 65.3 | Plus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 8009..8045 | 1430..1466 | 113 | 78.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11106047..11107622 | 1..1577 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1365 | 150..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1365 | 150..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1365 | 150..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1365 | 150..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1365 | 150..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1576 | 2..1577 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1576 | 2..1577 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1493 | 85..1577 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1576 | 2..1577 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-C-RA | 1..1493 | 85..1577 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15218837..15220412 | 1..1577 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15218837..15220412 | 1..1577 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15218837..15220412 | 1..1577 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11106342..11107917 | 1..1577 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15220036..15221611 | 1..1577 | 99 | Minus |
Translation from 149 to 1513
> RH33703.pep MLDAEVRELMQPFVLSDYQVQEVYSRFCLEVARGLKRSTHPQANVKCFPT YVQDLPTGDEMGKYLALDLGGTNFRVLLVSLKGHHDATVDSQIYAVPKDL MVGPGVDLFDHIAGCLAKFVEKHDMKTAYLPLGFTFSFPCVQLGLKEGIL VRWTKGFDCAGVEGEDVGRMLHEAIQRRGDADIAVVAILNDTTGTLMSCA HRNADCRVGVIVGTGCNACYVEDVENVDLLRADFKKTKRSVIVNAEWGAF GEGGQLDFVRTEYDREVDEKSLNRSEQLFEKMTAGMYLGNLVRLVLLRAL ERKLIFKQSSRRPEFASVLQRNEEVFETRYISEIEDDSFPEFASTRKIVK NLFGLEKASVEDCQTLRYICECVAKRAATLVAIGVSGLVNRTSNRRVIVG MDGSVYRYHPKFDAYMRQTLQKLVKADKEWDIMLSEDGSGRGAALVAAVA SKTK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12622-PA | 454 | GF12622-PA | 1..454 | 1..454 | 2206 | 91.4 | Plus |
Dana\GF22320-PA | 539 | GF22320-PA | 92..531 | 6..452 | 1284 | 54.4 | Plus |
Dana\GF20727-PA | 447 | GF20727-PA | 1..447 | 1..454 | 1057 | 46.7 | Plus |
Dana\GF20735-PA | 469 | GF20735-PA | 17..457 | 5..454 | 727 | 33.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22367-PA | 454 | GG22367-PA | 1..454 | 1..454 | 2387 | 97.8 | Plus |
Dere\GG18317-PA | 539 | GG18317-PA | 93..531 | 6..452 | 1278 | 54.1 | Plus |
Dere\GG11478-PA | 453 | GG11478-PA | 4..450 | 1..454 | 1050 | 45.4 | Plus |
Dere\GG11476-PA | 465 | GG11476-PA | 13..453 | 5..454 | 706 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21465-PA | 454 | GH21465-PA | 1..454 | 1..454 | 2006 | 78.9 | Plus |
Dgri\GH12375-PA | 538 | GH12375-PA | 93..531 | 6..452 | 1287 | 55 | Plus |
Dgri\GH19419-PA | 449 | GH19419-PA | 9..449 | 5..452 | 1163 | 50.2 | Plus |
Dgri\GH19418-PA | 459 | GH19418-PA | 12..448 | 5..450 | 745 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hex-C-PA | 454 | CG8094-PA | 1..454 | 1..454 | 2344 | 100 | Plus |
Hex-A-PC | 448 | CG3001-PC | 2..440 | 6..452 | 1243 | 54.4 | Plus |
Hex-A-PB | 448 | CG3001-PB | 2..440 | 6..452 | 1243 | 54.4 | Plus |
Hex-A-PA | 541 | CG3001-PA | 95..533 | 6..452 | 1243 | 54.4 | Plus |
Hex-t2-PA | 486 | CG32849-PA | 37..483 | 1..454 | 1046 | 46.5 | Plus |
Hex-t1-PA | 465 | CG33102-PA | 13..453 | 5..454 | 696 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19942-PA | 454 | GI19942-PA | 1..453 | 1..453 | 1956 | 80.4 | Plus |
Dmoj\GI14754-PA | 547 | GI14754-PA | 102..540 | 6..452 | 1275 | 54.7 | Plus |
Dmoj\GI22624-PA | 451 | GI22624-PA | 13..450 | 8..452 | 1107 | 48.3 | Plus |
Dmoj\GI22622-PA | 458 | GI22622-PA | 12..452 | 5..454 | 761 | 34.7 | Plus |
Dmoj\GI22621-PA | 454 | GI22621-PA | 12..449 | 5..451 | 750 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11018-PA | 454 | GL11018-PA | 1..454 | 1..454 | 2082 | 82.6 | Plus |
Dper\GL21847-PA | 456 | GL21847-PA | 11..453 | 5..454 | 1112 | 49.6 | Plus |
Dper\GL21996-PA | 466 | GL21996-PA | 14..454 | 5..454 | 676 | 30.4 | Plus |
Dper\GL15877-PA | 397 | GL15877-PA | 223..389 | 279..452 | 411 | 48.9 | Plus |
Dper\GL15877-PA | 397 | GL15877-PA | 103..221 | 6..124 | 393 | 58.8 | Plus |
Dper\GL21460-PA | 66 | GL21460-PA | 6..63 | 397..454 | 141 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20820-PA | 454 | GA20820-PA | 1..454 | 1..454 | 2082 | 82.6 | Plus |
Dpse\GA15574-PA | 549 | GA15574-PA | 103..541 | 6..452 | 1283 | 55.3 | Plus |
Dpse\GA26424-PA | 456 | GA26424-PA | 11..453 | 5..454 | 1112 | 49.6 | Plus |
Dpse\GA17282-PA | 466 | GA17282-PA | 14..454 | 5..454 | 665 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20151-PA | 454 | GM20151-PA | 1..454 | 1..454 | 2403 | 98.9 | Plus |
Dsec\GM10321-PA | 453 | GM10321-PA | 4..450 | 1..454 | 1069 | 46.1 | Plus |
Dsec\GM11376-PA | 388 | GM11376-PA | 95..305 | 6..216 | 705 | 61.1 | Plus |
Dsec\GM10320-PA | 465 | GM10320-PA | 16..453 | 5..454 | 695 | 32.7 | Plus |
Dsec\GM11377-PA | 155 | GM11377-PA | 21..147 | 325..452 | 345 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25630-PA | 454 | GD25630-PA | 1..454 | 1..454 | 2415 | 99.6 | Plus |
Dsim\Hex-t2-PA | 453 | GD21282-PA | 4..450 | 1..454 | 1073 | 46.3 | Plus |
Dsim\Hex-t1-PA | 400 | GD21281-PA | 16..233 | 5..225 | 375 | 35.3 | Plus |
Dsim\GD24777-PA | 69 | GD24777-PA | 6..61 | 397..452 | 184 | 62.5 | Plus |
Dsim\Hex-t1-PA | 400 | GD21281-PA | 264..388 | 331..454 | 178 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15111-PA | 454 | GJ15111-PA | 1..454 | 1..454 | 1958 | 79.5 | Plus |
Dvir\GJ19157-PA | 561 | GJ19157-PA | 116..554 | 6..452 | 1281 | 54.2 | Plus |
Dvir\GJ23870-PA | 450 | GJ23870-PA | 10..450 | 5..452 | 1124 | 49.1 | Plus |
Dvir\GJ23866-PA | 451 | GJ23866-PA | 10..449 | 5..451 | 1069 | 45.9 | Plus |
Dvir\GJ23869-PA | 458 | GJ23869-PA | 11..448 | 5..451 | 741 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21542-PA | 454 | GK21542-PA | 1..454 | 1..454 | 1985 | 79.5 | Plus |
Dwil\GK16160-PA | 535 | GK16160-PA | 90..528 | 6..452 | 1277 | 54.1 | Plus |
Dwil\GK19144-PA | 471 | GK19144-PA | 21..467 | 5..454 | 1101 | 48.9 | Plus |
Dwil\GK18967-PA | 460 | GK18967-PA | 9..439 | 5..442 | 1080 | 47.9 | Plus |
Dwil\GK13969-PA | 468 | GK13969-PA | 13..449 | 5..448 | 747 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Hex-C-PA | 454 | GE12255-PA | 1..454 | 1..454 | 2392 | 98.5 | Plus |
Dyak\Hex-A-PA | 546 | GE17799-PA | 100..538 | 6..452 | 1282 | 54.4 | Plus |
Dyak\Hex-t2-PA | 453 | GE23669-PA | 4..450 | 1..454 | 1084 | 46.5 | Plus |
Dyak\Hex-t1-PA | 465 | GE23668-PA | 38..453 | 30..454 | 711 | 34.1 | Plus |
Translation from 149 to 1513
> RH33703.hyp MLDAEVRELMQPFVLSDYQVQEVYSRFCLEVARGLKRSTHPQANVKCFPT YVQDLPTGDEMGKYLALDLGGTNFRVLLVSLKGHHDATVDSQIYAVPKDL MVGPGVDLFDHIAGCLAKFVEKHDMKTAYLPLGFTFSFPCVQLGLKEGIL VRWTKGFDCAGVEGEDVGRMLHEAIQRRGDADIAVVAILNDTTGTLMSCA HRNADCRVGVIVGTGCNACYVEDVENVDLLRADFKKTKRSVIVNAEWGAF GEGGQLDFVRTEYDREVDEKSLNRSEQLFEKMTAGMYLGNLVRLVLLRAL ERKLIFKQSSRRPEFASVLQRNEEVFETRYISEIEDDSFPEFASTRKIVK NLFGLEKASVEDCQTLRYICECVAKRAATLVAIGVSGLVNRTSNRRVIVG MDGSVYRYHPKFDAYMRQTLQKLVKADKEWDIMLSEDGSGRGAALVAAVA SKTK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hex-C-PA | 454 | CG8094-PA | 1..454 | 1..454 | 2344 | 100 | Plus |
Hex-A-PC | 448 | CG3001-PC | 2..440 | 6..452 | 1243 | 54.4 | Plus |
Hex-A-PB | 448 | CG3001-PB | 2..440 | 6..452 | 1243 | 54.4 | Plus |
Hex-A-PA | 541 | CG3001-PA | 95..533 | 6..452 | 1243 | 54.4 | Plus |
Hex-t2-PA | 486 | CG32849-PA | 37..483 | 1..454 | 1046 | 46.5 | Plus |