BDGP Sequence Production Resources |
Search the DGRC for RH34376
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 343 |
Well: | 76 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31676-RA |
Protein status: | RH34376.pep: gold |
Preliminary Size: | 561 |
Sequenced Size: | 1074 |
Gene | Date | Evidence |
---|---|---|
CG14404 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31676 | 2002-11-12 | Blastp of sequenced clone |
CG31676 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31676 | 2008-04-29 | Release 5.5 accounting |
CG31676 | 2008-08-15 | Release 5.9 accounting |
CG31676 | 2008-12-18 | 5.12 accounting |
1074 bp (1074 high quality bases) assembled on 2002-11-12
GenBank Submission: AY075543.1
> RH34376.complete GATTTCGCAGTCAGTTCGTCAACGGGTCGCATGCGTGTTCGGAAAATCGC GCAAAGCGAATGTTATTGTGGAGTATCGTTAGCTAAGGCAAATTCAAATA CCCCTAAAGTGCAGTGCTTGTGCAGTGATATACCTGGAATCAACCGAGAA ACGCATAAAAAGAAGGAATTATTGTATCATGGCCTACGGTTCAACCGGCT GCCTCTTGCTGGGCCTTTTCTCCTTGCTGATGGTTTTCAATACAGCTTCC GCGGTGCTGCGATGCTGGCGCTGTTCGACGGACGTCTCCAATGGCGAGTT CTGCAACGATCCCTTCATGCCGGAGACCATTTCGGAGCAGCAGCGGTACT GGAGCTACGTGAACTGCACCTACTCGGTGGGCGCCAAATCGGTGAATGCC CGGCCTGTCTGCAAGAAACTGGTGCAAGAAGTCTACGGCAAGCGGGTGAT TTCGCGTTCCTGTTTTTACGAGGACATGGACGACTCGGCGGACAAGTGCG CCAATGACCAGACATCGTCCTACATAAAAACCGTCTACTGCCGCACCTGC ACCACGGACGGTTGCAACGGAGCCAGTGGCGCCACTCCACGGGTCCTGCT CCTCATGCTGCCCCTGTTGCTGGCAGCAGCCTTCCGGCACTTGCCGCTGT GCAAATGAGCCAAAGGATCTGGCCCGGACTTAACTGCGGGACTTCAGGCT GAAGTTGAACTGGCCGGGAATTTCGGTGCTTAGCCCGGACTTAACTGAAT TTCTTCAACAAGTTTTAGTCACTTTGCCCTCACGAATCTGCACAAATCAC AGACGAACAGGATGCCCCGGTTAGGCAAAGCCCGTCAATCGGGGTCACCC TTTCGTCATCATCCGCGTAAATGTTACTGGGTCACCTCAGCCACGAAAAA TCAAACAGTTACTCGTAGTCAGTACTCTACACCCATAATAAATCACTCGA TCACACTTAACTTTGTTGTAATATGTACATCATGTAATATCTTTATTATT GTATTTGTAATTGAACGGCGCTGCCTGAACGTATATAAATAAATCGTAAT TAGATGGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20847084..20847711 | 430..1057 | 3110 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 20839311..20839555 | 4..245 | 1115 | 98 | Plus |
chr2L | 23010047 | chr2L | 20843870..20844058 | 243..431 | 900 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20848555..20849182 | 430..1057 | 3125 | 99.8 | Plus |
2L | 23513712 | 2L | 20840803..20841044 | 4..245 | 1195 | 99.6 | Plus |
2L | 23513712 | 2L | 20845340..20845528 | 243..431 | 930 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20848555..20849182 | 430..1057 | 3125 | 99.8 | Plus |
2L | 23513712 | 2L | 20840803..20841044 | 4..245 | 1195 | 99.5 | Plus |
2L | 23513712 | 2L | 20845340..20845528 | 243..431 | 930 | 99.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20839308..20839555 | 1..245 | 97 | -> | Plus |
chr2L | 20843873..20844058 | 246..431 | 98 | -> | Plus |
chr2L | 20847086..20847711 | 432..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 1..480 | 179..658 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 1..480 | 179..658 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 1..480 | 179..658 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 1..480 | 179..658 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 1..480 | 179..658 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 2..1057 | 2..1057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 2..1057 | 2..1057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 1..1056 | 2..1057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 2..1057 | 2..1057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31676-RA | 1..1056 | 2..1057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20845343..20845528 | 246..431 | 99 | -> | Plus |
2L | 20840800..20841044 | 1..245 | 98 | -> | Plus |
2L | 20848557..20849182 | 432..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20845343..20845528 | 246..431 | 99 | -> | Plus |
2L | 20840800..20841044 | 1..245 | 98 | -> | Plus |
2L | 20848557..20849182 | 432..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20845343..20845528 | 246..431 | 99 | -> | Plus |
2L | 20840800..20841044 | 1..245 | 98 | -> | Plus |
2L | 20848557..20849182 | 432..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20840800..20841044 | 1..245 | 98 | -> | Plus |
arm_2L | 20845343..20845528 | 246..431 | 99 | -> | Plus |
arm_2L | 20848557..20849182 | 432..1058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20840800..20841044 | 1..245 | 98 | -> | Plus |
2L | 20845343..20845528 | 246..431 | 99 | -> | Plus |
2L | 20848557..20849182 | 432..1058 | 99 | Plus |
Translation from 0 to 506
> RH34376.hyp QFAVSLSTGRMRVRKIAQSECYCGVSLAKANSNTPKVQCLCSDIPGINRE THKKKELLYHGLRFNRLPLAGPFLLADGFQYSFRGAAMLALFDGRLQWRV LQRSLHAGDHFGAAAVLELRELHLLGGRQIGECPACLQETGARSLRQAGD FAFLFLRGHGRLGGQVRQ*
Translation from 178 to 657
> RH34376.pep MAYGSTGCLLLGLFSLLMVFNTASAVLRCWRCSTDVSNGEFCNDPFMPET ISEQQRYWSYVNCTYSVGAKSVNARPVCKKLVQEVYGKRVISRSCFYEDM DDSADKCANDQTSSYIKTVYCRTCTTDGCNGASGATPRVLLLMLPLLLAA AFRHLPLCK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20941-PA | 159 | GF20941-PA | 3..142 | 2..141 | 597 | 85.7 | Plus |
Dana\GF20964-PA | 167 | GF20964-PA | 35..143 | 27..132 | 163 | 33 | Plus |
Dana\GF13713-PA | 155 | GF13713-PA | 9..139 | 11..151 | 161 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21259-PA | 159 | GG21259-PA | 1..159 | 1..159 | 724 | 92.5 | Plus |
Dere\GG21261-PA | 166 | GG21261-PA | 34..142 | 27..132 | 154 | 32.1 | Plus |
Dere\GG20404-PA | 155 | GG20404-PA | 10..123 | 9..133 | 144 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10589-PA | 155 | GH10589-PA | 25..134 | 25..134 | 535 | 90 | Plus |
Dgri\GH10590-PA | 160 | GH10590-PA | 7..138 | 9..133 | 170 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31676-PB | 159 | CG31676-PB | 1..159 | 1..159 | 857 | 100 | Plus |
CG31676-PA | 159 | CG31676-PA | 1..159 | 1..159 | 857 | 100 | Plus |
twit-PA | 166 | CG9335-PA | 34..157 | 27..146 | 184 | 33.1 | Plus |
CG6329-PF | 155 | CG6329-PF | 10..138 | 9..150 | 176 | 33.8 | Plus |
CG6329-PE | 155 | CG6329-PE | 10..138 | 9..150 | 176 | 33.8 | Plus |
CG6329-PD | 155 | CG6329-PD | 10..138 | 9..150 | 176 | 33.8 | Plus |
CG6329-PB | 155 | CG6329-PB | 10..138 | 9..150 | 176 | 33.8 | Plus |
CG6329-PC | 155 | CG6329-PC | 10..138 | 9..150 | 176 | 33.8 | Plus |
CG6329-PA | 155 | CG6329-PA | 10..138 | 9..150 | 176 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23176-PA | 155 | GI23176-PA | 25..130 | 25..130 | 518 | 90.6 | Plus |
Dmoj\GI23187-PA | 160 | GI23187-PA | 29..155 | 27..150 | 144 | 29.9 | Plus |
Dmoj\GI18639-PA | 154 | GI18639-PA | 10..137 | 9..151 | 137 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18525-PA | 157 | GL18525-PA | 3..137 | 2..136 | 618 | 83.7 | Plus |
Dper\GL18527-PA | 161 | GL18527-PA | 4..153 | 9..147 | 175 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25671-PA | 157 | GA25671-PA | 3..137 | 2..136 | 618 | 83.7 | Plus |
Dpse\GA21710-PA | 166 | GA21710-PA | 9..158 | 9..147 | 175 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23377-PA | 167 | GM23377-PA | 1..159 | 1..159 | 842 | 99.4 | Plus |
Dsec\GM23379-PA | 166 | GM23379-PA | 34..157 | 27..146 | 176 | 33.1 | Plus |
Dsec\GM21492-PA | 155 | GM21492-PA | 10..140 | 9..152 | 166 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24287-PA | 159 | GD24287-PA | 1..159 | 1..159 | 846 | 100 | Plus |
Dsim\GD24289-PA | 166 | GD24289-PA | 34..157 | 27..146 | 176 | 33.1 | Plus |
Dsim\GD10986-PA | 155 | GD10986-PA | 10..140 | 9..152 | 170 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23675-PA | 157 | GJ23675-PA | 26..133 | 25..132 | 519 | 88.9 | Plus |
Dvir\GJ23686-PA | 160 | GJ23686-PA | 29..138 | 27..133 | 156 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15439-PA | 159 | GK15439-PA | 21..140 | 18..137 | 572 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12881-PA | 159 | GE12881-PA | 1..159 | 1..159 | 681 | 92.5 | Plus |
Dyak\GE12884-PA | 166 | GE12884-PA | 34..158 | 27..147 | 178 | 33.6 | Plus |
Dyak\GE12564-PA | 157 | GE12564-PA | 10..139 | 9..151 | 167 | 33.6 | Plus |