Clone RH35136 Report

Search the DGRC for RH35136

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:351
Well:36
Vector:pFlc-1
Associated Gene/TranscriptPP2A-B'-RO
Protein status:RH35136.pep: gold
Preliminary Size:1379
Sequenced Size:3589

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7901 2002-01-01 Sim4 clustering to Release 2
CG7913 2005-01-26 Blastp of sequenced clone
PP2A-B' 2008-04-29 Release 5.5 accounting
PP2A-B' 2008-08-15 Release 5.9 accounting
PP2A-B' 2008-12-18 5.12 accounting

Clone Sequence Records

RH35136.complete Sequence

3589 bp (3589 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021232

> RH35136.complete
GAACTCTATTTTCTATTGAGCACCGACAACGTTGCGTGTATAAGACAGTT
TACATAAATTATTATTTACAATTGCACAGAGCGTTGATGTTGTGCGTTCT
AAGCGAAAAGAGGAGAGCACATCCAAAGAGCCAAAAAGAGTCAGAACCGA
TTGCGTATTATGGATAACGAGGCGTTAGATCCAACAATAAAAAGCAGTAC
GTCGGCAGCGACGCCAACAGCAGCAGCATCAGAAACGACAACAACAGCAG
CATCTTCAGTTGTGGAAACCACAACAACAATCGCGGCGGCCACAGCCTCA
GCGGCAGAATCAAAAAACGAAACAACGGCCACAAACAACAATAGCAACAC
AAGCGGCAGCATCAGCAGTAGTAGCAGCAACAATATAGTCATACCGGCAT
CGGCCACTAACGGTATCAAAGAGAGTAACAGTAACTTAAGTACAACAACA
ACAGCAGCAGCAGTAGCGGCAGCAACAACTGTAGAAGGAGTAGCTCCAGC
AATAACGTCCACAATCGTGGTGACCGGCGGCACTCCTCCATTGAGCAGTT
TGGCTAACAAACTCAAGGACAACACACCACCGTACGATGCACCGCCGCCC
ACGCCGATCAGCAAGGTCCTGAACATCACCGGCACCCCGATCGTTCGCAA
GGAGAAGCGCCAGACCAGCGCCCGGTACAATGCCTCCAAGAACTGCGAAC
TGACGGCCCTCATTCCGCTAAACGAGAAGACCGCCGCCAGTGAACGTGAG
GAGCTGTTCATACAGAAGATCCAGCAATGCTGCACACTGTTCGACTTCTC
CGAGCCGCTCAGCGACCTCAAGTTCAAGGAGGTGAAGCGGGCGGCTCTGC
ACGAAATGGTCGATTTCCTCACCAACCAAAATGGCGTAATAACCGAAGTT
ATTTACCCGGAGGCGATCAATATGTTTGCTGTCAACCTTTTCCGAACTCT
GCCGCCATCGTCCAACCCGAATGGTGCCGAATTCGATCCGGAGGAGGATG
AGCCCACGTTGGAGTCCTCGTGGCCGCATCTGCAACTCGTTTACGAGCTG
TTCTTGCGCTTCTTGGAGTCACCAGATTTTCAACCAAGCATGGCAAAACG
TTTTATCGACCATCAATTTGTATTACAACTATTGGATTTATTCGATTCGG
AGGATCCACGTGAACGTGATTTCCTGAAGACTGTTTTACATCGCATCTAT
GGAAAATTTTTGGGCTTGAGAGCATTTATTAGAAAGCAGATCAACAATGT
CTTTTACAGATTTATTTATGAAACGGAGCATCATAATGGCATAGCCGAAT
TGTTGGAAATCCTGGGTAGCATTATCAATGGCTTTGCTCTGCCGCTTAAG
GAGGAGCATAAACAATTTTTACTTAAGGTATTGCTGCCATTGCACAAAGC
CAAGAGCCTCTCGGTCTACCATCCGCAGCTCACCTATTGTGTGGTGCAGT
TCCTGGAGAAGGATCCTAGCTTATCGGAGGCGGTCATCAAAAGCCTACTT
AAATTTTGGCCCAAGACGCACAGTCCCAAGGAGGTTATGTTTTTGAACGA
GCTGGAGGAGCTGTTGGACGTAATTGAGCCGGCCGAGTTCCAGAAGGTGA
TGGTGCCGCTGTTCCGCCAAATAGCCAAGTGCGTCTCTTCGCCTCATTTC
CAGGTGGCCGAACGTGCGTTGTACTATTGGAACAACGAGTACATTATGTC
GCTGATAACGGATAACTCGGCGGTGATATTACCCATTATGTTCCCAGCGC
TCAATCGCAACTCAAAGACGCACTGGAACAAGACCATCCATGGTCTGATC
TACAATGCACTCAAGCTGTTCATGGAGATAGATCAGCGGCTTTTTGACGA
GTGCAGCAAGAACTACAAGCAAGAGAAGCAGATGGAGCGTGAGAAGCTGT
CGCAAAGGGAGGAGCTCTGGCAACAGGTGGAGAGCTTGGCCAAGACCAAC
CCGGAGTGGACAAAGGCGCGCCGGTTTAACGACTGCCTGCCGGTCAGCGA
CAGCCGGGCCCTGTGCGATCAATATAGTGAGAACAGCGATTCAGCGTATG
ATCAGAGCGAGCAGAGGGCGCGCCAGCCGCCGCCTCCGCTGCCGCCACAG
AAACAGGCGCACCAGGAGCCCCGAGAGTAAACGCGTGAATATAATTGTAC
AGTTGAATTTGAATTGTCTAACTTAAGGCGTAGGCGTTTACCACCTTGAT
TGAGTACATATATATCCCCCGATTTCTGCCACATGCATACATAGATAGCT
ATATGACATCCAGACATTCATGCCACATGCCACTATTATACACACATACT
ATATAAAACATGTTTACTACTCCACGACTCAAATTTGCAAATATTGTACG
CTATTTAGCCTAGCAGTTAGAGCAGCATACCCATAATATATTTATATGAA
ACAAATCGCCCAGCAGGACACATAAATTGTGGTATGTATGTGCGTGAGTG
TATTTTTGTATGTACTACCTATTAAATATAGAAATATATATATATATATA
TGTGCGGAGAACCGTGTTCCTGAACACCGATCAAAAGGAATTAGGCATTT
TTGTTTGTCCTGGACTGGCCGTGGATGATCCTGCGGACCGCCAAGGAATA
GAGATGTGCCAATTTCTGGTCCACCAAGCACAGTTGATAACCTATAAGCA
TCCTTACAACGTCACCACAACAGACTGGGACAAATTGCTGGTCGTAGCGT
CTACTTCTATACGTTAATCTATATCTATATGTTAAACTGTAATTTTGGAT
CCGTGTCAACCAGTCGTTTAGTTCCATAGTCAAGTCATTACCGGGTCCGT
TAGACAAGGATTTATGCAGATACTCTCAACTAATCTAGAATCTAGACAAA
GGCGACGAAGCAGATCAAAAGAGTTTTGCTACCACTACCAAGTGCTGTAC
ACGCCAAAAACGAAAGGCTTCAGTTTAGCTATAGACACAAATATATATAT
ATATATATATATTATATAAAGAGATGTATTTACATATTTTTGGCATTATA
GATACATACACAATGTGGAAAATTGCAAAACAATAATATGGGTGGAGAGG
TAAAGGGAAAGTAATTCTTAGAAAGGCAGATTTTTTCATACAGGAAACGG
TGAAAATCAAACTTTTCAACATAAGAATTAAACATATATATATATATGGG
AAAAACAAAGACTATAAAACATTTACTAAAAGTGAAAACAATAAATGAAA
AATGAGTTATACACCCTTAAAACAATATATATGTGCAAATTGTAAATGGA
GCATGTAATTTTGTAAAAATTATAAATAAAAGTTTATCAAGTCGAGAACT
TTTGAACTTAAGTTAAAATTGGAGACAATTTACAGAGCTGACGGCCTATT
TAAATACAAACTAAATACAATTATAGAAACTAGATCAAAATCCGGATGGA
TAAAGATGTCATTTGGCCACTTATTGCATACACTCATTTCACTGGAACTT
TTCTGTAAGTCCTCGGGTCTTCATTGCCATTTCCGACAAATGTTGTTGCA
ATAACCTCTTGTTGACCTTTTCCCTGTGAAAAAATTTATAAAATTAATAC
AATCTTTAAGGATCTATATATAGAAAAAAAAAAAAAAAA

RH35136.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
PP2A-B'.m 3753 PP2A-B'.m 149..3719 2..3572 17840 99.9 Plus
PP2A-B'.p 3698 PP2A-B'.p 64..2189 2..2127 10630 100 Plus
PP2A-B'.n 3225 PP2A-B'.n 64..2189 2..2127 10630 100 Plus
PP2A-B'.p 3698 PP2A-B'.p 2891..3698 2126..2933 4040 100 Plus
PP2A-B'.n 3225 PP2A-B'.n 2891..3225 2126..2460 1675 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14002947..14004385 2126..3572 7005 99.1 Plus
chr3R 27901430 chr3R 13994021..13994465 109..553 2225 100 Plus
chr3R 27901430 chr3R 14000671..14001064 1491..1884 1970 100 Plus
chr3R 27901430 chr3R 13999966..14000301 924..1259 1680 100 Plus
chr3R 27901430 chr3R 14001167..14001410 1884..2127 1205 99.6 Plus
chr3R 27901430 chr3R 14000366..14000598 1258..1490 1150 99.6 Plus
chr3R 27901430 chr3R 13999697..13999893 728..924 985 100 Plus
chr3R 27901430 chr3R 13995894..13996069 552..727 880 100 Plus
chr3R 27901430 chr3R 13992125..13992233 2..110 545 100 Plus
chr3R 27901430 chr3R 23389565..23389704 1280..1141 205 76.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:27:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18178604..18180050 2126..3572 7220 99.9 Plus
3R 32079331 3R 18169655..18170099 109..553 2225 100 Plus
3R 32079331 3R 18176307..18176700 1491..1884 1970 100 Plus
3R 32079331 3R 18175602..18175937 924..1259 1680 100 Plus
3R 32079331 3R 18176805..18177048 1884..2127 1220 100 Plus
3R 32079331 3R 18176002..18176234 1258..1490 1165 100 Plus
3R 32079331 3R 18175333..18175529 728..924 985 100 Plus
3R 32079331 3R 18171528..18171703 552..727 880 100 Plus
3R 32079331 3R 18167759..18167867 2..110 545 100 Plus
3R 32079331 3R 27566644..27566783 1280..1141 205 76.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 17919435..17920881 2126..3572 7220 99.9 Plus
3R 31820162 3R 17910486..17910930 109..553 2225 100 Plus
3R 31820162 3R 17917138..17917531 1491..1884 1970 100 Plus
3R 31820162 3R 17916433..17916768 924..1259 1680 100 Plus
3R 31820162 3R 17917636..17917879 1884..2127 1220 100 Plus
3R 31820162 3R 17916833..17917065 1258..1490 1165 100 Plus
3R 31820162 3R 17916164..17916360 728..924 985 100 Plus
3R 31820162 3R 17912359..17912534 552..727 880 100 Plus
3R 31820162 3R 17908590..17908698 2..110 545 100 Plus
3R 31820162 3R 27307475..27307614 1280..1141 205 76.4 Minus
3R 31820162 3R 27307225..27307367 1466..1324 145 73.4 Minus
Blast to na_te.dros performed 2019-03-16 15:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2337..2836 182..679 486 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6744..7060 190..511 328 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6710..7015 179..481 320 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6943 266..490 319 63.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2544 206..467 315 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2380..2683 190..505 311 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6728..6944 239..461 310 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2525 299..514 304 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2553 242..505 301 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6897 215..385 293 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6896 329..506 290 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..3034 208..504 284 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2787..3001 182..398 270 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6921 293..501 260 61.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2471 344..514 257 63.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6770..7079 182..500 250 57 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2509 323..532 249 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2594..2916 178..515 242 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6498..6829 177..505 236 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2381..2781 119..506 231 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2634..2937 203..494 230 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2601..2885 215..514 229 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2957 184..383 229 59.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6832..7088 205..461 212 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2585..2855 229..502 211 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6859 372..514 205 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6863 347..506 201 63.1 Plus
roo 9092 roo DM_ROO 9092bp 956..1161 307..513 195 57.6 Plus
roo 9092 roo DM_ROO 9092bp 1061..1159 293..392 191 67 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2323..2408 427..514 183 69.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1516..1587 180..254 178 74.7 Plus
roo 9092 roo DM_ROO 9092bp 1059..1180 222..342 177 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1498..1615 311..432 176 65 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4510..4691 216..395 175 60.4 Plus
roo 9092 roo DM_ROO 9092bp 1073..1161 330..418 174 68.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2318..2432 404..514 169 63.5 Plus
roo 9092 roo DM_ROO 9092bp 1067..1179 203..321 168 62.2 Plus
roo 9092 roo DM_ROO 9092bp 1058..1136 426..506 166 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6851..7005 203..349 161 62.7 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 970..1080 444..551 160 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6796 443..514 153 68.1 Plus
roo 9092 roo DM_ROO 9092bp 1007..1161 119..279 151 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2505 443..636 149 55.9 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3268..3335 193..259 148 70.6 Plus
roo 9092 roo DM_ROO 9092bp 1101..1164 190..255 145 73.1 Plus
roo 9092 roo DM_ROO 9092bp 1072..1154 397..479 144 66.7 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3277..3342 435..500 141 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1507..1605 181..277 138 62.6 Plus
roo 9092 roo DM_ROO 9092bp 1013..1104 410..501 136 60.9 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 671..722 494..443 134 73.1 Minus
roo 9092 roo DM_ROO 9092bp 1076..1180 182..281 133 63.8 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3254..3394 205..343 133 56 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 972..1019 212..259 132 75 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1521..1589 443..511 129 65.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1470..1648 305..480 128 57.5 Plus
roo 9092 roo DM_ROO 9092bp 1058..1164 372..480 125 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2359 449..501 121 69.8 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4496..4554 437..494 121 69.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1524..1587 405..467 119 67.2 Plus
Doc2-element 4789 Doc2-element DOC2 4789bp 549..622 442..512 119 66.2 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 67..196 352..481 118 56.5 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9097..9226 352..481 118 56.5 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7955..8049 443..538 117 60.8 Plus
TART-C 11124 TART-C TARTC 11124bp 9399..9493 443..538 117 60.8 Plus

RH35136.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:35:47 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14001167..14001410 1884..2127 99 -> Plus
chr3R 13992123..13992233 1..110 99 -> Plus
chr3R 13994023..13994464 111..552 100 -> Plus
chr3R 13995895..13996069 553..727 100 -> Plus
chr3R 13999697..13999893 728..924 100 -> Plus
chr3R 13999967..14000301 925..1259 100 -> Plus
chr3R 14000368..14000598 1260..1490 99 -> Plus
chr3R 14000671..14001063 1491..1883 100 -> Plus
chr3R 14002949..14004385 2128..3573 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:18:27 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 1..1971 160..2130 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:56 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 1..1971 160..2130 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:14:08 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 1..1971 160..2130 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:56:33 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 1..1971 160..2130 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:44:53 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 1..1971 160..2130 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:18:26 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 29..3601 1..3572 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:56 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 29..3600 1..3571 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:08 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 1..3572 1..3571 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:56:33 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 29..3601 1..3572 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:44:53 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
PP2A-B'-RK 1..3572 1..3571 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:35:47 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18176805..18177048 1884..2127 100 -> Plus
3R 18176307..18176699 1491..1883 100 -> Plus
3R 18175333..18175529 728..924 100 -> Plus
3R 18175603..18175937 925..1259 100 -> Plus
3R 18176004..18176234 1260..1490 100 -> Plus
3R 18167757..18167867 1..110 99 -> Plus
3R 18169657..18170098 111..552 100 -> Plus
3R 18171529..18171703 553..727 100 -> Plus
3R 18178606..18180050 2128..3573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:35:47 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18176805..18177048 1884..2127 100 -> Plus
3R 18176307..18176699 1491..1883 100 -> Plus
3R 18175333..18175529 728..924 100 -> Plus
3R 18175603..18175937 925..1259 100 -> Plus
3R 18176004..18176234 1260..1490 100 -> Plus
3R 18167757..18167867 1..110 99 -> Plus
3R 18169657..18170098 111..552 100 -> Plus
3R 18171529..18171703 553..727 100 -> Plus
3R 18178606..18180050 2128..3573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:35:47 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18176805..18177048 1884..2127 100 -> Plus
3R 18176307..18176699 1491..1883 100 -> Plus
3R 18175333..18175529 728..924 100 -> Plus
3R 18175603..18175937 925..1259 100 -> Plus
3R 18176004..18176234 1260..1490 100 -> Plus
3R 18167757..18167867 1..110 99 -> Plus
3R 18169657..18170098 111..552 100 -> Plus
3R 18171529..18171703 553..727 100 -> Plus
3R 18178606..18180050 2128..3573 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:08 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13997251..13997425 553..727 100 -> Plus
arm_3R 14002527..14002770 1884..2127 100 -> Plus
arm_3R 13993479..13993589 1..110 99 -> Plus
arm_3R 13995379..13995820 111..552 100 -> Plus
arm_3R 14001055..14001251 728..924 100 -> Plus
arm_3R 14001325..14001659 925..1259 100 -> Plus
arm_3R 14001726..14001956 1260..1490 100 -> Plus
arm_3R 14002029..14002421 1491..1883 100 -> Plus
arm_3R 14004328..14005772 2128..3573 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:50 Download gff for RH35136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17910488..17910929 111..552 100 -> Plus
3R 17912360..17912534 553..727 100 -> Plus
3R 17916164..17916360 728..924 100 -> Plus
3R 17916434..17916768 925..1259 100 -> Plus
3R 17916835..17917065 1260..1490 100 -> Plus
3R 17917138..17917530 1491..1883 100 -> Plus
3R 17917636..17917879 1884..2127 100 -> Plus
3R 17919437..17920881 2128..3573 99   Plus
3R 17908588..17908698 1..110 99 -> Plus

RH35136.pep Sequence

Translation from 159 to 2129

> RH35136.pep
MDNEALDPTIKSSTSAATPTAAASETTTTAASSVVETTTTIAAATASAAE
SKNETTATNNNSNTSGSISSSSSNNIVIPASATNGIKESNSNLSTTTTAA
AVAAATTVEGVAPAITSTIVVTGGTPPLSSLANKLKDNTPPYDAPPPTPI
SKVLNITGTPIVRKEKRQTSARYNASKNCELTALIPLNEKTAASEREELF
IQKIQQCCTLFDFSEPLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYP
EAINMFAVNLFRTLPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLR
FLESPDFQPSMAKRFIDHQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKF
LGLRAFIRKQINNVFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEH
KQFLLKVLLPLHKAKSLSVYHPQLTYCVVQFLEKDPSLSEAVIKSLLKFW
PKTHSPKEVMFLNELEELLDVIEPAEFQKVMVPLFRQIAKCVSSPHFQVA
ERALYYWNNEYIMSLITDNSAVILPIMFPALNRNSKTHWNKTIHGLIYNA
LKLFMEIDQRLFDECSKNYKQEKQMEREKLSQREELWQQVESLAKTNPEW
TKARRFNDCLPVSDSRALCDQYSENSDSAYDQSEQRARQPPPPLPPQKQA
HQEPRE*

RH35136.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:53:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16761-PA 968 GF16761-PA 337..891 37..631 2325 76.2 Plus
Dana\GF18705-PA 859 GF18705-PA 367..785 172..593 1630 69.2 Plus
Dana\GF16760-PA 175 GF16760-PA 67..172 82..189 203 67 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22681-PA 701 GG22681-PA 1..654 1..656 2865 93.6 Plus
Dere\GG12108-PA 524 GG12108-PA 30..448 172..593 1608 69.2 Plus
Dere\GG19075-PA 310 GG19075-PA 30..304 292..569 570 42.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15123-PA 990 GH15123-PA 445..923 156..638 2264 86.1 Plus
Dgri\GH21692-PA 538 GH21692-PA 30..448 172..593 1606 68.7 Plus
Dgri\GH15112-PA 165 GH15112-PA 49..163 81..189 238 62.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
wrd-PO 656 CG7913-PO 1..656 1..656 3373 100 Plus
wrd-PN 670 CG7913-PN 1..656 1..656 3373 100 Plus
wrd-PM 670 CG7913-PM 1..656 1..656 3373 100 Plus
wrd-PL 670 CG7913-PL 1..656 1..656 3373 100 Plus
wrd-PJ 703 CG7913-PJ 1..656 1..656 3373 100 Plus
wrd-PK 656 CG7913-PK 1..656 1..656 3373 100 Plus
wrd-PD 670 CG7913-PD 1..656 1..656 3373 100 Plus
wrd-PE 670 CG7913-PE 1..656 1..656 3373 100 Plus
wrd-PQ 716 CG7913-PQ 1..669 1..656 3349 98.1 Plus
wrd-PP 683 CG7913-PP 1..669 1..656 3349 98.1 Plus
wrd-PC 554 CG7913-PC 16..540 132..656 2756 100 Plus
wrd-PB 984 CG7913-PB 259..937 12..656 2523 75 Plus
wrd-PA 951 CG7913-PA 259..937 12..656 2523 75 Plus
wrd-PI 438 CG7913-PI 1..424 233..656 2233 100 Plus
wdb-PF 524 CG5643-PF 23..448 165..593 1577 68.8 Plus
wdb-PE 524 CG5643-PE 23..448 165..593 1577 68.8 Plus
wdb-PC 524 CG5643-PC 23..448 165..593 1577 68.8 Plus
wdb-PA 524 CG5643-PA 23..448 165..593 1577 68.8 Plus
wdb-PD 524 CG5643-PD 23..448 165..593 1577 68.8 Plus
wdb-PB 524 CG5643-PB 23..448 165..593 1577 68.8 Plus
CG32568-PC 325 CG32568-PC 31..276 294..539 482 38.6 Plus
CG32568-PB 325 CG32568-PB 31..276 294..539 482 38.6 Plus
Cht6-PI 2574 CG43374-PI 923..1218 9..289 191 24.5 Plus
Cht6-PK 3703 CG43374-PK 923..1218 9..289 191 24.5 Plus
Cht6-PJ 4519 CG43374-PJ 923..1218 9..289 191 24.5 Plus
Cht6-PC 4611 CG43374-PC 923..1218 9..289 191 24.5 Plus
Cht6-PG 1580 CG43374-PG 923..1137 9..199 179 27.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23720-PA 972 GI23720-PA 347..924 64..656 2259 73.9 Plus
Dmoj\GI10753-PA 707 GI10753-PA 215..633 172..593 1616 68.7 Plus
Dmoj\GI15981-PA 471 GI15981-PA 25..445 174..594 911 43.4 Plus
Dmoj\GI23719-PA 157 GI23719-PA 56..154 82..189 251 58.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12593-PA 761 GL12593-PA 67..687 70..631 2448 77.7 Plus
Dper\GL23581-PA 534 GL23581-PA 31..449 172..593 1609 69.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:54:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30019-PA 680 GA30019-PA 65..640 70..631 2525 84.1 Plus
Dpse\GA30019-PC 714 GA30019-PC 65..640 70..631 2520 84.1 Plus
Dpse\GA30019-PB 959 GA30019-PB 444..919 156..631 2250 86.9 Plus
Dpse\GA26642-PA 536 GA26642-PA 31..449 172..593 1608 69.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16338-PA 512 GM16338-PA 30..436 172..593 1525 66.6 Plus
Dsec\GM15281-PA 298 GM15281-PA 1..190 1..193 525 92.3 Plus
Dsec\GM20543-PA 326 GM20543-PA 22..300 284..562 463 36.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18073-PA 676 GD18073-PA 227..600 172..593 1339 59.7 Plus
Dsim\GD19205-PA 188 GD19205-PA 1..186 1..189 514 94.7 Plus
Dsim\GD17304-PA 323 GD17304-PA 22..297 284..562 425 35.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:54:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23278-PA 506 GJ23278-PA 1..492 162..656 2406 89.7 Plus
Dvir\GJ10695-PA 537 GJ10695-PA 30..448 172..593 1605 69 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11246-PA 984 GK11246-PA 450..936 183..656 2232 87.7 Plus
Dwil\GK11331-PA 526 GK11331-PA 30..448 172..593 1620 69.2 Plus
Dwil\GK11245-PA 202 GK11245-PA 80..195 77..189 271 48.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25516-PA 832 GE25516-PA 1..573 1..575 2509 92.5 Plus
Dyak\GE10557-PA 524 GE10557-PA 30..448 172..593 1608 69.2 Plus
Dyak\GE25516-PA 832 GE25516-PA 507..785 390..656 1084 77.8 Plus
Dyak\GE17620-PA 260 GE17620-PA 1..239 324..562 490 41 Plus

RH35136.hyp Sequence

Translation from 159 to 2129

> RH35136.hyp
MDNEALDPTIKSSTSAATPTAAASETTTTAASSVVETTTTIAAATASAAE
SKNETTATNNNSNTSGSISSSSSNNIVIPASATNGIKESNSNLSTTTTAA
AVAAATTVEGVAPAITSTIVVTGGTPPLSSLANKLKDNTPPYDAPPPTPI
SKVLNITGTPIVRKEKRQTSARYNASKNCELTALIPLNEKTAASEREELF
IQKIQQCCTLFDFSEPLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYP
EAINMFAVNLFRTLPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLR
FLESPDFQPSMAKRFIDHQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKF
LGLRAFIRKQINNVFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEH
KQFLLKVLLPLHKAKSLSVYHPQLTYCVVQFLEKDPSLSEAVIKSLLKFW
PKTHSPKEVMFLNELEELLDVIEPAEFQKVMVPLFRQIAKCVSSPHFQVA
ERALYYWNNEYIMSLITDNSAVILPIMFPALNRNSKTHWNKTIHGLIYNA
LKLFMEIDQRLFDECSKNYKQEKQMEREKLSQREELWQQVESLAKTNPEW
TKARRFNDCLPVSDSRALCDQYSENSDSAYDQSEQRARQPPPPLPPQKQA
HQEPRE*

RH35136.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
PP2A-B'-PO 656 CG7913-PO 1..656 1..656 3373 100 Plus
PP2A-B'-PN 670 CG7913-PN 1..656 1..656 3373 100 Plus
PP2A-B'-PM 670 CG7913-PM 1..656 1..656 3373 100 Plus
PP2A-B'-PL 670 CG7913-PL 1..656 1..656 3373 100 Plus
PP2A-B'-PJ 703 CG7913-PJ 1..656 1..656 3373 100 Plus