RH38463.complete Sequence
621 bp (621 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113585
> RH38463.complete
GATAGTTGGTTTAAACCTGCATTGGAGTGGAACTGTACTAACAATGAAAC
TGGCAATGTTGTCCTGGATTACTTGGGTGATGCTTCGGAGCATCGCAGAG
GCTCAAGTTCCAGATCAACCCGAGGCTATGGGTGCCGCCCAAGGGGGCTT
GGGCGCAGCGGCGGGGGCGGGCGGACAATTTGGAGCTCACGGCGGCGGAG
CGGCTAAAGCCGTTGAGGACGGACCTGGAGCTGGGATGGACGTCGGCATT
GGAGCGGGCGCCGAGGTGGGTGGGAGTGCTCGTGCCGGAGGCGCTGGACG
TAGACGCTAGGGACGTCTCTTATGTCAGACATTTCATAAACTTGTTTTTC
TATTTGTTCTTACACTTACACTTGTGCATTGGAAATACCTCCTAGAAGAA
GAAAGCCGACAGTACAGAGCTTTAATTAATTACCGCTGCTTTGTTAAAAA
ATGTCAAAATTTGTTTATCGCACACTCCGCACACTTGTCGGCGCCAGATT
TTTTTCCGGGAGCTCAGTGTCATAATTGATTCGAAATAGCGGTGCTCCGC
AACGTAATGGGTCACACGCACTCGACACTCACTTTAAATAAATGCGAAAC
AAATCAAAAAAAAAAAAAAAA
RH38463.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:13:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12483-RA | 773 | CG12483-RA | 57..663 | 2..608 | 3035 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:58:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 97583..98100 | 605..88 | 2560 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 98240..98326 | 88..2 | 435 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:28:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:58:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 97625..98145 | 608..88 | 2605 | 100 | Minus |
3L | 28110227 | 3L | 98285..98371 | 88..2 | 435 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:43:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 97625..98145 | 608..88 | 2605 | 100 | Minus |
3L | 28103327 | 3L | 98285..98371 | 88..2 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 19:58:54 has no hits.
RH38463.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:00:00 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 97583..98099 | 89..605 | 99 | <- | Minus |
chr3L | 98240..98326 | 1..88 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:45:55 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..267 | 44..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:58:42 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..267 | 44..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:36:39 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..267 | 44..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:52:00 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..267 | 44..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:48:18 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..267 | 44..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:39:08 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..604 | 2..605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:58:42 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..604 | 2..605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:36:39 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 4..608 | 1..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:52:00 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 1..604 | 2..605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:48:18 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12483-RA | 4..608 | 1..605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:00:00 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 97628..98144 | 89..605 | 100 | <- | Minus |
3L | 98285..98371 | 1..88 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:00:00 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 97628..98144 | 89..605 | 100 | <- | Minus |
3L | 98285..98371 | 1..88 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:00:00 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 97628..98144 | 89..605 | 100 | <- | Minus |
3L | 98285..98371 | 1..88 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:36:39 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 98285..98371 | 1..88 | 98 | | Minus |
arm_3L | 97628..98144 | 89..605 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:24:03 Download gff for
RH38463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 97628..98144 | 89..605 | 100 | <- | Minus |
3L | 98285..98371 | 1..88 | 98 | | Minus |
RH38463.hyp Sequence
Translation from 0 to 309
> RH38463.hyp
IVGLNLHWSGTVLTMKLAMLSWITWVMLRSIAEAQVPDQPEAMGAAQGGL
GAAAGAGGQFGAHGGGAAKAVEDGPGAGMDVGIGAGAEVGGSARAGGAGR
RR*
RH38463.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:12:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12483-PA | 88 | CG12483-PA | 1..88 | 15..102 | 452 | 100 | Plus |
RH38463.pep Sequence
Translation from 43 to 309
> RH38463.pep
MKLAMLSWITWVMLRSIAEAQVPDQPEAMGAAQGGLGAAAGAGGQFGAHG
GGAAKAVEDGPGAGMDVGIGAGAEVGGSARAGGAGRRR*
RH38463.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:25:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14688-PA | 88 | GG14688-PA | 1..88 | 1..88 | 203 | 78.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12483-PA | 88 | CG12483-PA | 1..88 | 1..88 | 452 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:25:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13540-PA | 88 | GD13540-PA | 1..75 | 1..75 | 179 | 93.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:25:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21049-PA | 90 | GE21049-PA | 1..90 | 1..88 | 193 | 78.9 | Plus |