BDGP Sequence Production Resources |
Search the DGRC for RH40150
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 401 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5854-RB |
Protein status: | RH40150.pep: full length peptide match |
Preliminary Size: | 1218 |
Sequenced Size: | 1598 |
Gene | Date | Evidence |
---|---|---|
CG5854 | 2002-10-18 | Blastp of sequenced clone |
CG5854 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5854 | 2008-04-29 | Release 5.5 accounting |
CG5854 | 2008-08-15 | Release 5.9 accounting |
CG5854 | 2008-12-18 | 5.12 accounting |
1598 bp (1598 high quality bases) assembled on 2002-10-18
GenBank Submission: BT001818
> RH40150.complete GATTCCGGTTGACCGTGTCGCGCCTGCAGCATGTCTGAAAAGCCGACTGT TCTGATTTTGGGTGGTAAGTGGTCCCGCTGCATCCTCCTCATCGTCATCC TGCCCCCGCTCCCCACTCCACACTTCCGCTTATCAGCATCGCTGACTGCA TCGCTGCTCTTCCTCTTCCCGCAGGCTGCGGCTTCATTGGACGCAACTTG GCCACTTATCTGCTGGACAATGAACTGGCGCAGGAAATACGACTGGCCGA TAAGACCCCTCCGCAGATGGCATGGCTAAACGAGGAGCAGACGCGGGTCT TCGAGAGCGATCGGGTGGAGTTCTGCAGCGCGAACCTAATAAACGCCGCC TCATGCAAGGCGGCTTTTGCGCCACACCCCACCACTGGACGGGCCTGGGA CATTGTCATCAATTGTGCGGCCGAGACGCGTGCCAACCAGGATGATGCCG TATACAAGGAGGGTATCCTGAAGCTCAGTTTGAACTGCGCCAATGAGGCG GCTAACCAGCGGGTCAAACGATACGTGGAACTCAGCTCTGGTTGTGTGAA CAGCAGCGAAAAGACGCCGTTAAAAGAGGACTGCAAGACGGATCCCTGGA CGGGCGTGGCCAAGCAGAAGCTCAAGGTGGAGAAGGAACTGGCCAACATC GACGATCTCAGTTACACGGTCGTCCGTTTGCCCGTGGTCTATGGCATTGG CGATAAGCGCTATTTGATGCCGCGCATTATAATCGCTGCCATATACAAAT ACCTGAACGAGACAATGAAGCTGCTGTGGAACGATGCCATGCGTTTGAAT ACTGTGCACGTATCGGACGTGTGCGCTGCCGTTTGGCAATTGGCTCAGAG TCCCAAGACCGCCGGTCAGATCTACAACATCTGCGATGATTCAGCATCGA CGCAGGGCACCATTAGTAATCTTTTAGTGGATATTTTCGACATCAATTTG GATTTCTTCGGCCTTGTAATGTCGAATTTGGCAAAACTTTATCCCACGGA CACCGTCAGTGAAATCAACGACAAGCACATGGCACCCTGGGCCGAGATTT GCCAGCGCAATGGCATCGACAACACCCCGCTGACACCGTACCTAGATGAG GAGCAGCTCCAGCACAAGCACCTCTACTTGGATAACACGAAACTGAAAGA CTTTGGCTACGTGCTGCAGCATCCGAAAGTCACTCGCGAGCTGCTCATGG AGATGATTAACGACTATGTGAAGCAGCAATTGTTTCCGAAATCGTTGGTT CTTTGATTCACTACTTCTATCAAAAGATTGCACCACGTTGACATGCACTC GGACCCGGAGACATTTATTCCCTGTAGCTTGTAATCCACTAGTTTTTTAA ACGATTATCAAACCTCTTCCAATTTGTATACGGACACGGATACTCTCACA TGCACGCTGTGCTGTATCTCCGTTTTTTTTAATCACAAAAGTGTACTTAT AGTATTATAGAACCCATATATTTTTGATACATTCCAGTCGATCCAGCGAT ATATACGTTTTTGCGTACGAGTATTCCATTGTGATTAGCTAAGTGACCAA CCGCAATCGACAATTAAAATGCACTTGTTTAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5854.b | 2042 | CG5854.b | 3..1584 | 2..1583 | 7910 | 100 | Plus |
CG5854-RB | 1732 | CG5854-RB | 105..1686 | 2..1583 | 7910 | 100 | Plus |
CG5854.c | 1520 | CG5854.c | 69..1516 | 136..1583 | 7240 | 100 | Plus |
CG5854.c | 1520 | CG5854.c | 7..69 | 2..64 | 315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19758793..19759389 | 987..1582 | 2935 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 19757992..19758361 | 348..717 | 1805 | 99.2 | Plus |
chr3R | 27901430 | chr3R | 19757427..19757773 | 2..348 | 1735 | 100 | Plus |
chr3R | 27901430 | chr3R | 19758458..19758726 | 718..986 | 1345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23935364..23935960 | 987..1583 | 2985 | 100 | Plus |
3R | 32079331 | 3R | 23934563..23934932 | 348..717 | 1850 | 100 | Plus |
3R | 32079331 | 3R | 23933998..23934344 | 2..348 | 1735 | 100 | Plus |
3R | 32079331 | 3R | 23935029..23935297 | 718..986 | 1345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23676195..23676791 | 987..1583 | 2985 | 100 | Plus |
3R | 31820162 | 3R | 23675394..23675763 | 348..717 | 1850 | 100 | Plus |
3R | 31820162 | 3R | 23674829..23675175 | 2..348 | 1735 | 100 | Plus |
3R | 31820162 | 3R | 23675860..23676128 | 718..986 | 1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19757993..19758361 | 349..717 | 99 | -> | Plus |
chr3R | 19758458..19758726 | 718..986 | 100 | -> | Plus |
chr3R | 19757425..19757773 | 1..348 | 99 | -> | Plus |
chr3R | 19758793..19759389 | 987..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RA | 34..1116 | 174..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RA | 34..1116 | 174..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RA | 34..1116 | 174..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RA | 34..1116 | 174..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RA | 34..1116 | 174..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RB | 1..1583 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RB | 1..1583 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RA | 149..1557 | 174..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RB | 1..1583 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5854-RA | 149..1557 | 174..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23933996..23934344 | 1..348 | 99 | -> | Plus |
3R | 23934564..23934932 | 349..717 | 100 | -> | Plus |
3R | 23935029..23935297 | 718..986 | 100 | -> | Plus |
3R | 23935364..23935959 | 987..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23933996..23934344 | 1..348 | 99 | -> | Plus |
3R | 23934564..23934932 | 349..717 | 100 | -> | Plus |
3R | 23935029..23935297 | 718..986 | 100 | -> | Plus |
3R | 23935364..23935959 | 987..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23933996..23934344 | 1..348 | 99 | -> | Plus |
3R | 23934564..23934932 | 349..717 | 100 | -> | Plus |
3R | 23935029..23935297 | 718..986 | 100 | -> | Plus |
3R | 23935364..23935959 | 987..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19759718..19760066 | 1..348 | 99 | -> | Plus |
arm_3R | 19760286..19760654 | 349..717 | 100 | -> | Plus |
arm_3R | 19760751..19761019 | 718..986 | 100 | -> | Plus |
arm_3R | 19761086..19761681 | 987..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23674827..23675175 | 1..348 | 99 | -> | Plus |
3R | 23675395..23675763 | 349..717 | 100 | -> | Plus |
3R | 23675860..23676128 | 718..986 | 100 | -> | Plus |
3R | 23676195..23676790 | 987..1582 | 100 | Plus |
Translation from 266 to 1255
> RH40150.pep MAWLNEEQTRVFESDRVEFCSANLINAASCKAAFAPHPTTGRAWDIVINC AAETRANQDDAVYKEGILKLSLNCANEAANQRVKRYVELSSGCVNSSEKT PLKEDCKTDPWTGVAKQKLKVEKELANIDDLSYTVVRLPVVYGIGDKRYL MPRIIIAAIYKYLNETMKLLWNDAMRLNTVHVSDVCAAVWQLAQSPKTAG QIYNICDDSASTQGTISNLLVDIFDINLDFFGLVMSNLAKLYPTDTVSEI NDKHMAPWAEICQRNGIDNTPLTPYLDEEQLQHKHLYLDNTKLKDFGYVL QHPKVTRELLMEMINDYVKQQLFPKSLVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17025-PA | 371 | GF17025-PA | 43..371 | 1..329 | 1672 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11238-PA | 371 | GG11238-PA | 43..371 | 1..329 | 1762 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21196-PA | 372 | GH21196-PA | 43..372 | 1..329 | 1564 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5854-PA | 371 | CG5854-PA | 43..371 | 1..329 | 1728 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10482-PA | 371 | GI10482-PA | 43..371 | 1..329 | 1560 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23381-PA | 371 | GL23381-PA | 43..371 | 1..329 | 1601 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19181-PB | 329 | GA19181-PB | 1..329 | 1..329 | 1606 | 88.1 | Plus |
Dpse\GA19181-PA | 371 | GA19181-PA | 43..371 | 1..329 | 1605 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26540-PA | 371 | GM26540-PA | 43..371 | 1..329 | 1766 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21047-PA | 371 | GD21047-PA | 43..371 | 1..329 | 1771 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23163-PA | 371 | GJ23163-PA | 43..371 | 1..329 | 1585 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11485-PA | 369 | GK11485-PA | 43..369 | 1..329 | 1559 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23430-PA | 371 | GE23430-PA | 43..371 | 1..329 | 1761 | 99.1 | Plus |
Translation from 266 to 1255
> RH40150.hyp MAWLNEEQTRVFESDRVEFCSANLINAASCKAAFAPHPTTGRAWDIVINC AAETRANQDDAVYKEGILKLSLNCANEAANQRVKRYVELSSGCVNSSEKT PLKEDCKTDPWTGVAKQKLKVEKELANIDDLSYTVVRLPVVYGIGDKRYL MPRIIIAAIYKYLNETMKLLWNDAMRLNTVHVSDVCAAVWQLAQSPKTAG QIYNICDDSASTQGTISNLLVDIFDINLDFFGLVMSNLAKLYPTDTVSEI NDKHMAPWAEICQRNGIDNTPLTPYLDEEQLQHKHLYLDNTKLKDFGYVL QHPKVTRELLMEMINDYVKQQLFPKSLVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5854-PA | 371 | CG5854-PA | 43..371 | 1..329 | 1728 | 100 | Plus |