BDGP Sequence Production Resources |
Search the DGRC for RH40632
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 406 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32647-RA |
Protein status: | RH40632.pep: gold |
Sequenced Size: | 1232 |
Gene | Date | Evidence |
---|---|---|
CG15723 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32647 | 2002-05-30 | Blastp of sequenced clone |
CG32647 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32647 | 2008-04-29 | Release 5.5 accounting |
CG32647 | 2008-08-15 | Release 5.9 accounting |
CG32647 | 2008-12-18 | 5.12 accounting |
1232 bp (1232 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118433
> RH40632.complete GAGTTGGCTCTTGACTCTCCCACGCTGCAGTCGGTGGCTCTGGCCGGAAT CAGAACCGGAATCGGAATCGGTATCGGAATCGCAATCCGAATCGGAATCG GAATCGGAATCTTGCCCGGATTGCATAGAGCGTACTGGGAGTGAGAGAGT GGTTCGTCACACTTGCAGTTGCAGTTGCAGCAGCAGCAGCAGCAGCAGCA GCAGCGTAGTGGCAGCAGCAAAAATCAACAAAATCAACAAAAGGCAACAC AAAAGACGAGTGCAAGGACAGGCCAAGAAGAAGCAGCAGTACAAAAAGGA TAATTGCAACAGCAAACATAAGAAGTAAGCCAGGCAACTGCAACAGCAAC ATTTGCTGCAAGTGCAGCTCCCACAGCCATCGCCGCCGCCAAGTTCAAAA TCAACGCCTGACAATGACAAAGGCAGCAGCAGCAGCAGCAACAGCAACAG CAACAACAACAGCGGCAGCAACACCAATCAAAACAGCAGCAGCAACCAAA GCAATAACAATCAATGGGCCCCAAACGACATGGCGACGTCAACGAGGCTG CTGCACAACAACAACAACAGCAGCAATACGAAACATGCAGCAGCAAAAGC AAAAGCAACAGCAACAATCGTACTTGCAACGCCTTAAGGCGGCCGGTCGA CTGGGGGCGTGGCCGCCACCAATGACGTCGTTGCTTTGGCTGCCAACTGA CTATCTCGCCCAGCTGATTTTGGCCCTATGCCTGCTGGGCTGCCTCAGCC CCTTTACAGCTGCACTCGAGGAGGACTGTGTTGACTTTCAGGGCAACAAG GTGAACCACGGAATGCTCTATGTGCCTGGACCAGGAGTCTGTAGCCTTTG CGTCTGCTATCACTCCGAACCACTCTGGTGCAAGGCCATCTACTGTGATC CACCCTATTTTTGCAAAAACTTTCGAGTTGGCGAACGTTGCTGTGAGTTC GAGTGCTTGGATCCGCCCGGCGAGGACAAACTGTACCAGGAACGCATGCG AAAGAGGGCCGAGATACTGGCCGGCAACAGTACGGCCTCGAATGTGCAAC TCGCCCCGATTGCCATGTCCACCATAATGCTGGGATTCCTGGGCAATAGC TTCCTGAACTTATAACTTGAAGTCAAATAGCAAGAGATGGAGATCAACTT AAGGCGAAGCTAAATCACAATATCCTCATTTTTTGTTGCTCCTAAAGCGT AGGACACTCTCTACCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12673961..12674462 | 759..258 | 2510 | 100 | Minus |
chrX | 22417052 | chrX | 12675576..12675832 | 258..2 | 1255 | 99.2 | Minus |
chrX | 22417052 | chrX | 12667452..12667680 | 1216..988 | 1145 | 100 | Minus |
chrX | 22417052 | chrX | 12667957..12668109 | 908..756 | 765 | 100 | Minus |
chrX | 22417052 | chrX | 12667744..12667829 | 994..909 | 415 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12783089..12783590 | 759..258 | 2510 | 100 | Minus |
X | 23542271 | X | 12784702..12784958 | 258..2 | 1285 | 100 | Minus |
X | 23542271 | X | 12776557..12776800 | 1231..988 | 1220 | 100 | Minus |
X | 23542271 | X | 12777077..12777229 | 908..756 | 765 | 100 | Minus |
X | 23542271 | X | 12776864..12776949 | 994..909 | 415 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12791187..12791688 | 759..258 | 2510 | 100 | Minus |
X | 23527363 | X | 12792800..12793056 | 258..2 | 1285 | 100 | Minus |
X | 23527363 | X | 12784655..12784898 | 1231..988 | 1220 | 100 | Minus |
X | 23527363 | X | 12785175..12785327 | 908..756 | 765 | 100 | Minus |
X | 23527363 | X | 12784962..12785047 | 994..909 | 415 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2671 | 276..622 | 409 | 62.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..7220 | 172..629 | 408 | 59.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..7070 | 303..645 | 342 | 61.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2438..2874 | 171..615 | 291 | 57.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6714..6954 | 231..479 | 235 | 58.6 | Plus |
rover | 7318 | rover ROVER 7318bp | 5419..5506 | 220..309 | 129 | 64.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12673961..12674102 | 618..759 | 100 | == | Minus |
chrX | 12674166..12674209 | 511..554 | 100 | == | Minus |
chrX | 12667957..12668105 | 760..908 | 100 | <- | Minus |
chrX | 12674298..12674461 | 259..422 | 100 | <- | Minus |
chrX | 12667452..12667678 | 990..1216 | 100 | <- | Minus |
chrX | 12667749..12667829 | 909..989 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..702 | 414..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..702 | 414..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RB | 1..702 | 414..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..702 | 414..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..702 | 414..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..1215 | 2..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..1215 | 2..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..1215 | 2..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..1215 | 2..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32647-RA | 1..1215 | 2..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12777077..12777225 | 760..908 | 100 | <- | Minus |
X | 12776572..12776798 | 990..1216 | 100 | <- | Minus |
X | 12776869..12776949 | 909..989 | 100 | <- | Minus |
X | 12783089..12783589 | 259..759 | 100 | <- | Minus |
X | 12784702..12784958 | 1..258 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12777077..12777225 | 760..908 | 100 | <- | Minus |
X | 12776572..12776798 | 990..1216 | 100 | <- | Minus |
X | 12776869..12776949 | 909..989 | 100 | <- | Minus |
X | 12783089..12783589 | 259..759 | 100 | <- | Minus |
X | 12784702..12784958 | 1..258 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12777077..12777225 | 760..908 | 100 | <- | Minus |
X | 12776572..12776798 | 990..1216 | 100 | <- | Minus |
X | 12776869..12776949 | 909..989 | 100 | <- | Minus |
X | 12783089..12783589 | 259..759 | 100 | <- | Minus |
X | 12784702..12784958 | 1..258 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12670605..12670831 | 990..1216 | 100 | <- | Minus |
arm_X | 12670902..12670982 | 909..989 | 100 | <- | Minus |
arm_X | 12671110..12671258 | 760..908 | 100 | <- | Minus |
arm_X | 12677122..12677622 | 259..759 | 100 | <- | Minus |
arm_X | 12678735..12678991 | 1..258 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12784670..12784896 | 990..1216 | 100 | <- | Minus |
X | 12784967..12785047 | 909..989 | 100 | <- | Minus |
X | 12785175..12785323 | 760..908 | 100 | <- | Minus |
X | 12791187..12791687 | 259..759 | 100 | <- | Minus |
X | 12792800..12793056 | 1..258 | 99 | Minus |
Translation from 413 to 1114
> RH40632.hyp MTKAAAAAATATATTTAAATPIKTAAATKAITINGPQTTWRRQRGCCTTT TTAAIRNMQQQKQKQQQQSYLQRLKAAGRLGAWPPPMTSLLWLPTDYLAQ LILALCLLGCLSPFTAALEEDCVDFQGNKVNHGMLYVPGPGVCSLCVCYH SEPLWCKAIYCDPPYFCKNFRVGERCCEFECLDPPGEDKLYQERMRKRAE ILAGNSTASNVQLAPIAMSTIMLGFLGNSFLNL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32647-PD | 233 | CG32647-PD | 1..233 | 1..233 | 1251 | 100 | Plus |
CG32647-PC | 233 | CG32647-PC | 1..233 | 1..233 | 1251 | 100 | Plus |
CG32647-PA | 233 | CG32647-PA | 1..233 | 1..233 | 1251 | 100 | Plus |
CG32647-PB | 233 | CG32647-PB | 1..233 | 1..233 | 1251 | 100 | Plus |
CG42404-PF | 105 | CG42404-PF | 29..98 | 122..188 | 147 | 40 | Plus |
Translation from 413 to 1114
> RH40632.pep MTKAAAAAATATATTTAAATPIKTAAATKAITINGPQTTWRRQRGCCTTT TTAAIRNMQQQKQKQQQQSYLQRLKAAGRLGAWPPPMTSLLWLPTDYLAQ LILALCLLGCLSPFTAALEEDCVDFQGNKVNHGMLYVPGPGVCSLCVCYH SEPLWCKAIYCDPPYFCKNFRVGERCCEFECLDPPGEDKLYQERMRKRAE ILAGNSTASNVQLAPIAMSTIMLGFLGNSFLNL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20890-PA | 141 | GF20890-PA | 20..141 | 113..233 | 637 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19539-PA | 231 | GG19539-PA | 1..231 | 1..233 | 964 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24570-PA | 216 | GH24570-PA | 96..216 | 115..233 | 614 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32647-PD | 233 | CG32647-PD | 1..233 | 1..233 | 1251 | 100 | Plus |
CG32647-PC | 233 | CG32647-PC | 1..233 | 1..233 | 1251 | 100 | Plus |
CG32647-PA | 233 | CG32647-PA | 1..233 | 1..233 | 1251 | 100 | Plus |
CG32647-PB | 233 | CG32647-PB | 1..233 | 1..233 | 1251 | 100 | Plus |
CG42404-PF | 105 | CG42404-PF | 29..98 | 122..188 | 147 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11067-PA | 129 | GI11067-PA | 12..129 | 116..233 | 618 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22966-PA | 248 | GL22966-PA | 23..248 | 7..233 | 694 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17040-PA | 248 | GA17040-PA | 28..248 | 4..233 | 685 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11533-PA | 175 | GM11533-PA | 1..175 | 58..233 | 929 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15917-PA | 147 | GD15917-PA | 26..147 | 112..233 | 657 | 97.5 | Plus |
Dsim\GD15870-PA | 119 | GD15870-PA | 38..118 | 34..116 | 304 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16927-PA | 141 | GJ16927-PA | 10..141 | 102..233 | 620 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10277-PA | 255 | GK10277-PA | 32..255 | 12..233 | 659 | 63.2 | Plus |