BDGP Sequence Production Resources |
Search the DGRC for RH41321
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 413 |
Well: | 21 |
Vector: | pFlc-1 |
Associated Gene/Transcript | glob1-RA |
Protein status: | RH41321.pep: gold |
Sequenced Size: | 976 |
Gene | Date | Evidence |
---|---|---|
CG9734 | 2002-10-24 | Blastp of sequenced clone |
CG9734 | 2003-01-01 | Sim4 clustering to Release 3 |
glob1 | 2008-04-29 | Release 5.5 accounting |
glob1 | 2008-08-15 | Release 5.9 accounting |
glob1 | 2008-12-18 | 5.12 accounting |
976 bp (976 high quality bases) assembled on 2002-10-24
GenBank Submission: BT001819
> RH41321.complete GATTCAGTTCAAATATTAACGGCGTCGTGTGCAGTTGCCTGGCATTTGAT ATAAACTCCTAAAAGCCATTAAGAGAGGGCCGAACGCTTATAGAGAGCTA TAGAGTGAAAGCTGAGAAGAACCAAAACGGAGCATAAACATGAACAGCGA TGAGGTGCAACTGATCAAGAAGACCTGGGAAATCCCCGTGGCAACACCAA CAGATTCTGGAGCGGCGATACTGACGCAGTTTTTCAACCGCTTTCCGTCC AACTTGGAGAAGTTCCCCTTCCGCGATGTTCCTTTGGAGGAGCTAAGTGG AAATGCTCGCTTCCGAGCACATGCCGGCAGAATCATAAGGGTCTTTGACG AGTCCATCCAGGTCCTGGGCCAGGATGGCGATCTGGAGAAGCTGGACGAG ATCTGGACCAAAATTGCCGTTAGTCACATTCCGCGGACCGTTTCCAAGGA GTCTTACAACCAACTGAAAGGAGTTATCCTGGATGTGCTGACAGCTGCCT GCAGTCTGGACGAGAGTCAAGCGGCCACGTGGGCCAAGCTGGTGGACCAT GTCTACGGAATCATCTTCAAGGCGATCGACGACGACGGCAACGCCAAGTA GATGAGGCAGCTGGAGGTGGAGATGCAACCGAATCCGCGGAAGGATGCAA CTGATGCCAGCCGGTGGCACTTGCAACACATGCACAGCTTATGTAGTTCT AAGTAATTGATAAATGTTAGCTATTCTCGTTTTGTAATAATGGATGCGAA TGTCCAAAACAAAAATACACACACAGTGAAAACTTATGTCTGCGTAGAGC TACTGACACACGCGCACACCCCACACACATACACCCGCACTTGCATTGCT CTGTAAAGCTTTAACCCATTGTCAGCCTTAAGCACTTGATAGCAAACAAT ACATGGAATCAGCAAAGGAGAAATAAGAAAGCTTATAAATAAAATCCAGT TTGAAAGCACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
glob1-RC | 1031 | glob1-RC | 17..974 | 2..959 | 4775 | 99.8 | Plus |
glob1.c | 1683 | glob1.c | 687..1644 | 2..959 | 4775 | 99.8 | Plus |
glob1-RE | 1068 | glob1-RE | 369..1029 | 299..959 | 3290 | 99.8 | Plus |
glob1-RE | 1068 | glob1-RE | 7..304 | 2..299 | 1490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11721506..11722004 | 959..461 | 2465 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 11722355..11722596 | 299..58 | 1210 | 100 | Minus |
chr3R | 27901430 | chr3R | 11722129..11722290 | 460..299 | 810 | 100 | Minus |
chr3R | 27901430 | chr3R | 11727022..11727077 | 57..2 | 280 | 100 | Minus |
chr3R | 27901430 | chr3R | 11729081..11729136 | 57..2 | 280 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15896925..15897423 | 959..461 | 2480 | 99.8 | Minus |
3R | 32079331 | 3R | 15897774..15898015 | 299..58 | 1210 | 100 | Minus |
3R | 32079331 | 3R | 15897548..15897709 | 460..299 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15902443..15902498 | 57..2 | 280 | 100 | Minus |
3R | 32079331 | 3R | 15904502..15904557 | 57..2 | 280 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15637756..15638254 | 959..461 | 2480 | 99.7 | Minus |
3R | 31820162 | 3R | 15638605..15638846 | 299..58 | 1210 | 100 | Minus |
3R | 31820162 | 3R | 15638379..15638540 | 460..299 | 810 | 100 | Minus |
3R | 31820162 | 3R | 15645333..15645388 | 57..2 | 280 | 100 | Minus |
3R | 31820162 | 3R | 15643274..15643329 | 57..2 | 280 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 667..717 | 730..781 | 113 | 71.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11721505..11722004 | 461..960 | 99 | <- | Minus |
chr3R | 11722129..11722290 | 299..460 | 100 | <- | Minus |
chr3R | 11722356..11722596 | 58..298 | 100 | <- | Minus |
chr3R | 11727022..11727077 | 1..57 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RA | 1..462 | 140..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RA | 1..462 | 140..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RB | 1..462 | 140..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RA | 1..462 | 140..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RA | 1..462 | 140..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RC | 6..963 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RC | 6..963 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RC | 6..963 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RC | 6..963 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
glob1-RC | 4..961 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15897775..15898015 | 58..298 | 100 | <- | Minus |
3R | 15902443..15902498 | 1..57 | 98 | Minus | |
3R | 15896924..15897423 | 461..960 | 99 | <- | Minus |
3R | 15897548..15897709 | 299..460 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15897775..15898015 | 58..298 | 100 | <- | Minus |
3R | 15902443..15902498 | 1..57 | 98 | Minus | |
3R | 15896924..15897423 | 461..960 | 99 | <- | Minus |
3R | 15897548..15897709 | 299..460 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15897775..15898015 | 58..298 | 100 | <- | Minus |
3R | 15902443..15902498 | 1..57 | 98 | Minus | |
3R | 15896924..15897423 | 461..960 | 99 | <- | Minus |
3R | 15897548..15897709 | 299..460 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11723497..11723737 | 58..298 | 100 | <- | Minus |
arm_3R | 11728165..11728220 | 1..57 | 98 | Minus | |
arm_3R | 11722646..11723145 | 461..960 | 99 | <- | Minus |
arm_3R | 11723270..11723431 | 299..460 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15637755..15638254 | 461..960 | 99 | <- | Minus |
3R | 15638379..15638540 | 299..460 | 100 | <- | Minus |
3R | 15638606..15638846 | 58..298 | 100 | <- | Minus |
3R | 15643274..15643329 | 1..57 | 98 | Minus |
Translation from 139 to 600
> RH41321.pep MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDVPLE ELSGNARFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT VSKESYNQLKGVILDVLTAACSLDESQAATWAKLVDHVYGIIFKAIDDDG NAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16470-PA | 153 | GF16470-PA | 1..153 | 1..153 | 732 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20278-PA | 153 | GG20278-PA | 1..153 | 1..153 | 788 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13816-PA | 153 | GH13816-PA | 1..152 | 1..152 | 638 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
glob1-PF | 153 | CG9734-PF | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PD | 153 | CG9734-PD | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PA | 153 | CG9734-PA | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PB | 153 | CG9734-PB | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PC | 153 | CG9734-PC | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PE | 67 | CG9734-PE | 1..53 | 1..53 | 275 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24641-PA | 153 | GI24641-PA | 1..152 | 1..152 | 677 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21726-PA | 154 | GL21726-PA | 1..152 | 1..152 | 747 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\glob1-PB | 154 | GA21995-PB | 1..152 | 1..152 | 740 | 89.5 | Plus |
Dpse\glob1-PA | 154 | GA21995-PA | 1..152 | 1..152 | 740 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25744-PA | 153 | GM25744-PA | 1..153 | 1..153 | 802 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20318-PA | 57 | GD20318-PA | 1..53 | 1..53 | 281 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\glob1-PA | 153 | GJ23463-PA | 1..152 | 1..152 | 683 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11857-PA | 153 | GK11857-PA | 1..153 | 1..153 | 741 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26348-PA | 153 | GE26348-PA | 1..153 | 1..153 | 803 | 98.7 | Plus |
Translation from 139 to 600
> RH41321.hyp MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDVPLE ELSGNARFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT VSKESYNQLKGVILDVLTAACSLDESQAATWAKLVDHVYGIIFKAIDDDG NAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
glob1-PF | 153 | CG9734-PF | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PD | 153 | CG9734-PD | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PA | 153 | CG9734-PA | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PB | 153 | CG9734-PB | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PC | 153 | CG9734-PC | 1..153 | 1..153 | 786 | 100 | Plus |