BDGP Sequence Production Resources |
Search the DGRC for RH42110
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 421 |
Well: | 10 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11123-RA |
Protein status: | RH42110.pep: gold |
Preliminary Size: | 2041 |
Sequenced Size: | 2151 |
Gene | Date | Evidence |
---|---|---|
CG11123 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11123 | 2002-03-21 | Blastp of sequenced clone |
CG11123 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11123 | 2008-04-29 | Release 5.5 accounting |
CG11123 | 2008-08-15 | Release 5.9 accounting |
CG11123 | 2008-12-18 | 5.12 accounting |
2151 bp (2151 high quality bases) assembled on 2002-03-21
GenBank Submission: AY094923
> RH42110.complete GCCTTTGGCTTGGTATTTTATTTTTACAGCGTGTTCTGGCGCACGTTGGA AGTAGAATTTAGTTTTAATTATTATATTGAAGAGGAATGCAGGCCGAAGG CGACTCAAGGCGAAAGCGGCCCAAGAAGAAGGGCAACCGCTTTATGCGGA ACGCCAAGGGGTTCGCCAAGCAGGGGATATTCGGCCGGGGTACGCACATC GACGACGAGCAGTTCAACTACTTCATCAACATTCTGGATGCTATGAAAGT GGGATTCGAGGACGTAGAGGAGCGAGTCATCATGGCCAACAATGTGTTCG AGCAGACCCACGATCAGGAGATCCATCTGGCCTCCAATCAGATCGTGTCC AAGGCTCTGGAGTCGTTAGTGGGCTTCGTGGACGACGTGCAGTTGGAGCG CTTTTTTAGCAAGTTTGGCGACAACCTCCGGCCCATGTGCTCCGATCGGT TTGCCTCGCACGTCCTGCAGAAAATGCTGGAAATCGCCTTTTTGCGCGGA GTGGGAAAATCTGCAGCCCAGGATACCAGCGATGCAGCTAGCGCCAACAA AAAAGCTAAGCCGGATGCCGCTCAAGAGGAGGAGGAGTACAACCTGCAGG CGGACTTCACAGATGATCACCGCGAGAAGTGCCGGCAGTTCGTTCTTCGC ATATCAAAGTTCATGTTGAACAATCTGGAGGACTTCGTTTGGGACGCCTG TGCCAGCCACATCATGCGCACAGCCATTCTGTGCCTGGTGGGCATGCACG TTCCCAAAATCGCCTTCGAGAAAGGTGGGACTGAGATAGCCAAGCATAGG AAGATGTACTCTGTGCCGGATGAGTGGCAGGAGGTCATGAAGGAGTTCCC CCAGCGCCTGGAGATGTGGCCCCAGTTCGGCGACTTTCCCTACCAGGATC ACTCTTCAAGTCTGCTGGGCGTCATCTGTTTGGCCCTCAGTGTCGTGGAC AAAAGTATGCTCAAGCATTTTGCCAAGAAAATCCTGACGATCGGTCTGCT GAAGTCGAGCGACGAGGACGAGGAGAAAATGGAATTGGACACCAAAATCG AAATCAAGGACGAGGATGATGATAATGATGAAAAGGAGGATAAGAAGGCG AAAGAAGCAGATGCCGACACTGAGAACAAGCAGGAAGAGCCAAAACTACC CAAAGTTTTCCATCATCAAAGCTCAGTCATTCTGCTCGAAACGATTATGA GCGTAGCGGGAGCCAAATTGATGATCCAGCTGTATGCGATGCTCTTCTGC AACCGAATAGGTTACCTAGCTCGGCAGCCAGGAACGAACTTTTCAGTCCA GCGTCTCCTTCAGCACATCAAAGAGGTGCCTGATTTCGAGTCCGTTTTCA CCGAACTCCAGCCGCATGTGGAGGAGCTGCTGAAAATGGGATACACCGGC GTCGTGTCCGCCCTCAGTGCCGCCTGCTTGCGACTGGCCACCAAGCAGTC TCAGATGATAGCCGCTTTGCAGAGTGCCCTCCATGTCAGTGGCGACAAGG AGAAATCGAAGCTTTTCCTTACATGTTTGATTAAGTTAAAGCCCTTTGAG GTGGTGACCGGCGACGAGTCGGCCTTTGTTCATCTGCACGGTTCGCTTAT TACTCAACACCTGCTGCAGTTCAACAAGCCAATCTTTCTGGTCAACTGTA TCCTCGATCTGCCCGCCACCCAACTGGCTCAGGTCTTCAACACACCCAAT GGCTCACACATCGTTGACGCCTTCATGCAGAGCAAGTTCATCGGCGAGAA GTCCCGCGAGCGTCTGATCCGCCAGTTGGATGGCTTCTACGTAGACTTGG CCATCACTCGACATGGTTCCCGCGTCTTCGAACAGTGCTTTAAGGCCGCC CAAGATGCGCAGAAACTGCGCATGGCCAAGGAACTGTTTTCCAAGGCCAA TATGCTGAAAGGCTCACCACACGGTCGGATCATCTACACAAAATACCGCC TGGACACGTACAAGCTTTCACCTACGCAATGGCAGGAAAGTTTGTCCAAG CATCTGGACGCCGAGCAGACAAAGGAGACGAAGCGGAAAACGGCCAAGAC AGCTGTCGAAGCTTTTAAGGACATACTTAGCTAGTATATAGATTGTTTAA ACTAATAAACCTTATCTAAACTATTGTTAGAGGCCAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11123-RA | 2316 | CG11123-RA | 71..2202 | 2..2133 | 10645 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3328047..3328322 | 1..276 | 99 | -> | Plus |
chr2R | 3328381..3330239 | 277..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 1..1998 | 87..2084 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 1..1998 | 87..2084 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 1..1998 | 87..2084 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 1..1998 | 87..2084 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 1..1998 | 87..2084 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 2..2135 | 2..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 2..2135 | 2..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 1..2122 | 14..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 2..2135 | 2..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11123-RA | 1..2122 | 14..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7440693..7440968 | 1..276 | 99 | -> | Plus |
2R | 7441027..7442885 | 277..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7440693..7440968 | 1..276 | 99 | -> | Plus |
2R | 7441027..7442885 | 277..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7440693..7440968 | 1..276 | 99 | -> | Plus |
2R | 7441027..7442885 | 277..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3328198..3328473 | 1..276 | 99 | -> | Plus |
arm_2R | 3328532..3330390 | 277..2135 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7441892..7442167 | 1..276 | 99 | -> | Plus |
2R | 7442226..7444084 | 277..2135 | 99 | Plus |
Translation from 86 to 2083
> RH42110.pep MQAEGDSRRKRPKKKGNRFMRNAKGFAKQGIFGRGTHIDDEQFNYFINIL DAMKVGFEDVEERVIMANNVFEQTHDQEIHLASNQIVSKALESLVGFVDD VQLERFFSKFGDNLRPMCSDRFASHVLQKMLEIAFLRGVGKSAAQDTSDA ASANKKAKPDAAQEEEEYNLQADFTDDHREKCRQFVLRISKFMLNNLEDF VWDACASHIMRTAILCLVGMHVPKIAFEKGGTEIAKHRKMYSVPDEWQEV MKEFPQRLEMWPQFGDFPYQDHSSSLLGVICLALSVVDKSMLKHFAKKIL TIGLLKSSDEDEEKMELDTKIEIKDEDDDNDEKEDKKAKEADADTENKQE EPKLPKVFHHQSSVILLETIMSVAGAKLMIQLYAMLFCNRIGYLARQPGT NFSVQRLLQHIKEVPDFESVFTELQPHVEELLKMGYTGVVSALSAACLRL ATKQSQMIAALQSALHVSGDKEKSKLFLTCLIKLKPFEVVTGDESAFVHL HGSLITQHLLQFNKPIFLVNCILDLPATQLAQVFNTPNGSHIVDAFMQSK FIGEKSRERLIRQLDGFYVDLAITRHGSRVFEQCFKAAQDAQKLRMAKEL FSKANMLKGSPHGRIIYTKYRLDTYKLSPTQWQESLSKHLDAEQTKETKR KTAKTAVEAFKDILS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12956-PA | 665 | GF12956-PA | 1..665 | 1..665 | 2916 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23278-PA | 663 | GG23278-PA | 1..663 | 1..665 | 3295 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21165-PA | 666 | GH21165-PA | 1..666 | 1..665 | 2771 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11123-PA | 665 | CG11123-PA | 1..665 | 1..665 | 3417 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18760-PA | 669 | GI18760-PA | 17..669 | 17..665 | 2528 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11166-PA | 661 | GL11166-PA | 1..661 | 1..665 | 2778 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10772-PA | 661 | GA10772-PA | 1..661 | 1..665 | 2777 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20954-PA | 663 | GM20954-PA | 1..663 | 1..665 | 3456 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10479-PA | 664 | GD10479-PA | 1..664 | 1..665 | 3484 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21784-PA | 668 | GJ21784-PA | 19..668 | 19..665 | 2553 | 73.3 | Plus |
Dvir\GJ16352-PA | 58 | GJ16352-PA | 1..58 | 549..606 | 280 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21319-PA | 661 | GK21319-PA | 1..661 | 1..665 | 2549 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19125-PA | 662 | GE19125-PA | 1..662 | 1..665 | 3334 | 94.1 | Plus |
Translation from 86 to 2083
> RH42110.hyp MQAEGDSRRKRPKKKGNRFMRNAKGFAKQGIFGRGTHIDDEQFNYFINIL DAMKVGFEDVEERVIMANNVFEQTHDQEIHLASNQIVSKALESLVGFVDD VQLERFFSKFGDNLRPMCSDRFASHVLQKMLEIAFLRGVGKSAAQDTSDA ASANKKAKPDAAQEEEEYNLQADFTDDHREKCRQFVLRISKFMLNNLEDF VWDACASHIMRTAILCLVGMHVPKIAFEKGGTEIAKHRKMYSVPDEWQEV MKEFPQRLEMWPQFGDFPYQDHSSSLLGVICLALSVVDKSMLKHFAKKIL TIGLLKSSDEDEEKMELDTKIEIKDEDDDNDEKEDKKAKEADADTENKQE EPKLPKVFHHQSSVILLETIMSVAGAKLMIQLYAMLFCNRIGYLARQPGT NFSVQRLLQHIKEVPDFESVFTELQPHVEELLKMGYTGVVSALSAACLRL ATKQSQMIAALQSALHVSGDKEKSKLFLTCLIKLKPFEVVTGDESAFVHL HGSLITQHLLQFNKPIFLVNCILDLPATQLAQVFNTPNGSHIVDAFMQSK FIGEKSRERLIRQLDGFYVDLAITRHGSRVFEQCFKAAQDAQKLRMAKEL FSKANMLKGSPHGRIIYTKYRLDTYKLSPTQWQESLSKHLDAEQTKETKR KTAKTAVEAFKDILS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11123-PA | 665 | CG11123-PA | 1..665 | 1..665 | 3417 | 100 | Plus |