BDGP Sequence Production Resources |
Search the DGRC for RH42281
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 422 |
Well: | 81 |
Vector: | pFlc-1 |
Associated Gene/Transcript | KFase-RA |
Protein status: | RH42281.pep: gold |
Preliminary Size: | 903 |
Sequenced Size: | 1019 |
Gene | Date | Evidence |
---|---|---|
CG9542 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9542 | 2002-02-22 | Blastp of sequenced clone |
CG9542 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9542 | 2008-04-29 | Release 5.5 accounting |
CG9542 | 2008-08-15 | Release 5.9 accounting |
CG9542 | 2008-12-18 | 5.12 accounting |
1019 bp (1019 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089670
> RH42281.complete GACTTGCTACTTTGCCTTTCTAATCTGTGTTTGAAGTCCCAGTGACTTAC TGTCTCTTATCTGGAATGTACAATCCGAGGTGCAAAGACCTTGACCGGGA CTATTTTCCCAGCTATCATACGACCAGGTTTCAGGATCAGCCGGAACCGA ATTTGGCCGTGCTAGAGCACTTTGTTCGGGTGACCAAGCAGCATGGCAGG GAACTGACTGAGAAGCAGGGCATCACTGTGGACCACTTGCGCTACGGAGA AGGTCGTCAGTTGGTGGATGTGTTCTACAGCGAAAAGACCACCAACCAGG CGCCGCTTTTCGTCTTCGTGCACGGCGGCTACTGGCAGGAGATGGACATG AGCATGTCCTGCTCGATTGTGGGTCCCCTGGTGCGGCGTGGATACCGAGT GGCCGTCATGGACTACAACCTGTGCCCGCAGGTCACCCTCGAGCAGCTGA TGACCCAGTTCACCCATTTCCTCAACTGGATCTTTGACTACACCGAAATG ACCAAAGTGTCGTCGCTCACCTTCGCCGGACACTCGGCTGGTGCCCACTT GCTGGCCCAGATACTCATGCGCCCAAATGTGATTACAGCCCAGCGGAGCA AGATGGTGTGGGCTTTGATCTTCCTCTGCGGCGTTTACGATCTGAGGGAG CTCTCTAACTTGGAATCGGTTAATCCCAAAAATATTCTGGGCCTCAACGA GCGGAATATCGAGTCCGTGTCGCCCATGCTGTGGGAATACACCGATGTTA CCGTTTGGAACTCCACCAAGATCTACGTGGTGGCCGCCGAGCATGACAGC ACCACCTTCATCGAGCAAAGTCGCCACTACGCTGATGTGCTGAGAAAGAA GGGCTACAAGGCGAGCTTTACGCTCTTCAAAGGGTACGACCACTTCGACA TCATCGAGGAGACGGCCATCGACGATTCGGATGTATCCCGCTTTCTGCGC AACATTGAAATTGAATAAACTAGGCGCAGTTTCGCTTTGCGTCATCGTTT CTCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9542-RA | 1332 | CG9542-RA | 267..1269 | 2..1004 | 5015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6486545..6487355 | 193..1003 | 99 | <- | Minus |
chr2L | 6487408..6487598 | 1..192 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9542-RA | 1..903 | 66..968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9542-RA | 1..903 | 66..968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
KFase-RA | 1..903 | 66..968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9542-RA | 1..903 | 66..968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
KFase-RA | 1..903 | 66..968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9542-RA | 1..1002 | 2..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9542-RA | 1..1002 | 2..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
KFase-RA | 1..1002 | 2..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9542-RA | 1..1002 | 2..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
KFase-RA | 1..1002 | 2..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6487562..6488372 | 193..1003 | 100 | <- | Minus |
2L | 6488425..6488615 | 1..192 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6487562..6488372 | 193..1003 | 100 | <- | Minus |
2L | 6488425..6488615 | 1..192 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6487562..6488372 | 193..1003 | 100 | <- | Minus |
2L | 6488425..6488615 | 1..192 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6488425..6488615 | 1..192 | 99 | Minus | |
arm_2L | 6487562..6488372 | 193..1003 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6487562..6488372 | 193..1003 | 100 | <- | Minus |
2L | 6488425..6488615 | 1..192 | 99 | Minus |
Translation from 65 to 967
> RH42281.pep MYNPRCKDLDRDYFPSYHTTRFQDQPEPNLAVLEHFVRVTKQHGRELTEK QGITVDHLRYGEGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCS IVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSS LTFAGHSAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLE SVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIE QSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNIEIE *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15705-PA | 299 | GF15705-PA | 1..298 | 1..298 | 1020 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23617-PA | 300 | GG23617-PA | 1..300 | 1..300 | 1470 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13248-PA | 307 | GH13248-PA | 1..299 | 1..294 | 919 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
KFase-PB | 300 | CG9542-PB | 1..300 | 1..300 | 1590 | 100 | Plus |
KFase-PA | 300 | CG9542-PA | 1..300 | 1..300 | 1590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17287-PA | 308 | GI17287-PA | 1..300 | 1..294 | 940 | 59 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26102-PA | 302 | GL26102-PA | 1..299 | 1..297 | 1088 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21868-PA | 302 | GA21868-PA | 1..299 | 1..297 | 1082 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17933-PA | 300 | GM17933-PA | 1..300 | 1..300 | 1591 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22571-PA | 288 | GD22571-PA | 1..288 | 1..300 | 1507 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17896-PA | 321 | GJ17896-PA | 1..299 | 1..294 | 976 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18691-PA | 308 | GK18691-PA | 3..305 | 1..296 | 896 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18436-PA | 300 | GE18436-PA | 1..300 | 1..300 | 1469 | 87.7 | Plus |
Translation from 65 to 967
> RH42281.hyp MYNPRCKDLDRDYFPSYHTTRFQDQPEPNLAVLEHFVRVTKQHGRELTEK QGITVDHLRYGEGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCS IVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSS LTFAGHSAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLE SVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIE QSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNIEIE *