Clone RH42588 Report

Search the DGRC for RH42588

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:425
Well:88
Vector:pFlc-1
Associated Gene/Transcriptkar-RA
Protein status:RH42588.pep: gold
Sequenced Size:2194

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12286 2003-01-01 Sim4 clustering to Release 3
CG12286 2005-01-26 Blastp of sequenced clone
kar 2008-04-29 Release 5.5 accounting
kar 2008-08-15 Release 5.9 accounting
kar 2008-12-18 5.12 accounting

Clone Sequence Records

RH42588.complete Sequence

2194 bp (2194 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021229

> RH42588.complete
GATTTCCGCCGCCGACGACGCAAGCGTTCGGTTGTGTGCTCGCTCGAGAG
GTCTCCACCCGACCACTGATTCCCGCGATTCTCGAGTCGGCTTCATCTGA
TTCCCAGAGTCTTCAAGTGAATCGCACGTCTGCCTGCAGCGACTGGAGTT
CCGGCTTACAAGCAGCACTCCGAATCCAATCCTAGCCAGCAGCCATGGCT
GAGAATGAACCGCTGAACGACCTGCAGAGCCAGGTGAATGGTCGTATCCT
GCCCGCCGCCAATGGACATACAGCATCCGCGACCAACGGATTGGTGCATG
CGAATGGCAAGGATGCAATGAAGCCGTCAGCTCCCGTTCAGAATGGGAAT
GGCAACGCGAACGGGACACACATCGAGGCGCCCTGCTGTCGGGACATACA
CGGCAAGGAGCCACCGGACGGAGGAGCACGCGCCTGGCTGGTCATGGTGA
GCGCCTTCCTTTGCAACGGCATCATCTTTGGGTTCATCAACACCTACGGC
GTTATCCATTCGCTGCTGACGGATAGGCTTACGAAGCTCGGCGATCCGGA
GGCGTCCAGCAAAGCGGCTCTGATTGGCGCCCTGGCCATCGGCACCACAT
TCCTCTTCTCCACAATGGCTGGCTGTCTGACGGACAAGATTGGCCTGCGG
CTGACCACGTTCGCCGGCGGAGTCCTCTCCGCGGGAGGACTGCTGCTGTC
CTCGTTTTGCACGGAGAACATCGGCGCCCTGTACTTCACCTACGGGATCA
TGTTCGGCCTGGGTGCCGCCCTTGCCTACACGCCCACATTGGCCATCCTG
GGCCACTATTTCAAGCGGTACCTGGGAAAGGTGAGTGGCTTTGTGACCGC
CGGCTCCAGCGTTTTCACTGTGATACTGCCGCCCTGTCTGGACAAGCTGC
TCGGTAGCTATGGTCTGGAGGGGACCCTGCGGATAATGAGCCTCGTTTCC
GCCTTTATTATCCTTTGCTCCTTCGTGTACAAGCCACTGCATCCGCCACC
GGAGCCGCCGAAGAAGAAGCCCGGCAGATCGCGCATCAATCTCTTCCTAC
GCTCGATCATCAACGTGGAGATCTGGAAGCGTAAACGCTTCGTCATCTGG
GCACTTTGTGTGCCGCTCGCCTTGTTCGGCTACTTTGTGCCCTATGTGCA
CATGATGCAGTTCGTGAAAACCACTTTTCCGGGAGAGGATGTCAACCTGC
CGGTCATGTGTATCGGCATCACCTCCGGCATCGGGCGTCTGATTTTCGGA
GTCATTGCCGATATGCCGGGTGTGAACCGTATGTACCTGCAACAATTGTC
CTTGGTGTCCATTGGCCTGGTTACCTTGCTGCTGCCGCTCACCAACTCGT
ACGTCATCCTCGTCTCGTTCACCCTGGTCATGGGTCTTTTCGACGGCTGC
TTCATTTCGCTGCTGGGCCCAATAGCCTACGAGATCTGTGGCCCCTCGGG
CGCCACACAGGCCATCGGCTTTCTGCTAGGACTCAGTTCTATTCCGCTCA
CAGTGGGTCCACCAGTGGCGGGCATGATCTTCGACAGCACGAACTCCTAC
ACATTGCCGCTGATCCTCGCCGGACTCCCCCCACTACTTGGCTCCTCGCT
CTTGTTCCTCATCAAGTGCGTCAAGGAGGAGGAGAACGGGGTCAGTGCGC
CGCGAGCGGTGGTACTGGCCAATGGAGACATCGAGATTGCCGGCAACGGC
CATTATCGGTCGGCTGGCACCAAGTCCAGTGCACCGCTGATGGGTGCCAC
GAATGGTATCAATGGAAGCGCACCAGCGTCCCCAACTATCCAGAGCAATG
GACACGTGGACAACGGAACTGGGAAACTCGCCGTGACCAACGGATCGGCG
TCGTAGGGAGACAGGCAGTCGTCGCAATAACTCAAAAACGCTAAATTCCA
CAAAACTTTCGAAACGAATTGAAAAGTTCTGCCATTTTCCGCTGTAATCT
CGTCGTCGGAGCCCGCAGCTTAGCCAGCGCAAAATCGAGGTGTTCATTCT
TTATATAGACCATAGCCATGTCGCACATGTTTCCAAGCATATGCTCATTC
ATCATCAGGTGGAGACGCATTGCCGCCTTCCCATCATCCATACGTGCATA
ATATACCTAGGCTAAAAACAGTTTGAAAACCAAATGAAAGTAATATTTTA
AATTTTAATAAATAATACACAGAATAAGAAAAAAAAAAAAAAAA

RH42588.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
kar-RA 2491 kar-RA 311..2487 4..2180 10885 100 Plus
kar.a 2464 kar.a 285..2461 4..2180 10885 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8508547..8509332 1717..932 3930 100 Minus
chr3R 27901430 chr3R 8512957..8513362 567..162 2015 99.8 Minus
chr3R 27901430 chr3R 8509387..8509756 936..567 1835 99.7 Minus
chr3R 27901430 chr3R 8507419..8507776 2178..1821 1790 100 Minus
chr3R 27901430 chr3R 8514450..8514608 162..4 795 100 Minus
chr3R 27901430 chr3R 8508369..8508475 1822..1716 535 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:29:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12683314..12684099 1717..932 3930 100 Minus
3R 32079331 3R 12687716..12688121 567..162 2030 100 Minus
3R 32079331 3R 12684154..12684523 936..567 1835 99.7 Minus
3R 32079331 3R 12682184..12682543 2180..1821 1800 100 Minus
3R 32079331 3R 12689208..12689366 162..4 795 100 Minus
3R 32079331 3R 12683136..12683242 1822..1716 535 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12424145..12424930 1717..932 3930 100 Minus
3R 31820162 3R 12428547..12428952 567..162 2030 100 Minus
3R 31820162 3R 12424985..12425354 936..567 1835 99.7 Minus
3R 31820162 3R 12423015..12423374 2180..1821 1800 100 Minus
3R 31820162 3R 12430039..12430197 162..4 795 100 Minus
3R 31820162 3R 12423967..12424073 1822..1716 535 100 Minus
Blast to na_te.dros performed 2019-03-16 00:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
aurora-element 4263 aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). 3762..3826 1614..1679 120 66.7 Plus

RH42588.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:11:46 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8507419..8507775 1822..2178 100 <- Minus
chr3R 8508370..8508474 1717..1821 100 <- Minus
chr3R 8508548..8509331 933..1716 100 <- Minus
chr3R 8509391..8509755 568..932 100 <- Minus
chr3R 8512957..8513362 162..567 99 <- Minus
chr3R 8514451..8514609 1..161 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:46:42 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 1..1662 195..1856 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:58 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 1..1662 195..1856 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:50:54 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 1..1662 195..1856 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:56:34 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 1..1662 195..1856 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:00:11 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 1..1662 195..1856 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:06:23 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 2..2176 4..2178 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:57 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 2..2176 4..2178 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:50:54 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 2..2176 4..2178 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:56:34 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 2..2176 4..2178 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:00:11 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
kar-RA 2..2176 4..2178 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:11:46 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12682186..12682542 1822..2178 100 <- Minus
3R 12683137..12683241 1717..1821 100 <- Minus
3R 12683315..12684098 933..1716 100 <- Minus
3R 12684158..12684522 568..932 100 <- Minus
3R 12687716..12688121 162..567 100 <- Minus
3R 12689209..12689367 1..161 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:11:46 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12682186..12682542 1822..2178 100 <- Minus
3R 12683137..12683241 1717..1821 100 <- Minus
3R 12683315..12684098 933..1716 100 <- Minus
3R 12684158..12684522 568..932 100 <- Minus
3R 12687716..12688121 162..567 100 <- Minus
3R 12689209..12689367 1..161 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:11:46 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12682186..12682542 1822..2178 100 <- Minus
3R 12683137..12683241 1717..1821 100 <- Minus
3R 12683315..12684098 933..1716 100 <- Minus
3R 12684158..12684522 568..932 100 <- Minus
3R 12687716..12688121 162..567 100 <- Minus
3R 12689209..12689367 1..161 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:50:54 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8507908..8508264 1822..2178 100 <- Minus
arm_3R 8508859..8508963 1717..1821 100 <- Minus
arm_3R 8509037..8509820 933..1716 100 <- Minus
arm_3R 8509880..8510244 568..932 100 <- Minus
arm_3R 8513438..8513843 162..567 100 <- Minus
arm_3R 8514931..8515089 1..161 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:52 Download gff for RH42588.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12423017..12423373 1822..2178 100 <- Minus
3R 12423968..12424072 1717..1821 100 <- Minus
3R 12424146..12424929 933..1716 100 <- Minus
3R 12424989..12425353 568..932 100 <- Minus
3R 12428547..12428952 162..567 100 <- Minus
3R 12430040..12430198 1..161 98   Minus

RH42588.pep Sequence

Translation from 194 to 1855

> RH42588.pep
MAENEPLNDLQSQVNGRILPAANGHTASATNGLVHANGKDAMKPSAPVQN
GNGNANGTHIEAPCCRDIHGKEPPDGGARAWLVMVSAFLCNGIIFGFINT
YGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFSTMAGCLTDKIG
LRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLA
ILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSL
VSAFIILCSFVYKPLHPPPEPPKKKPGRSRINLFLRSIINVEIWKRKRFV
IWALCVPLALFGYFVPYVHMMQFVKTTFPGEDVNLPVMCIGITSGIGRLI
FGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFD
GCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTN
SYTLPLILAGLPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIEIAG
NGHYRSAGTKSSAPLMGATNGINGSAPASPTIQSNGHVDNGTGKLAVTNG
SAS*

RH42588.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17875-PA 610 GF17875-PA 1..538 1..544 2338 89.4 Plus
Dana\GF22732-PA 657 GF22732-PA 25..235 48..266 254 33 Plus
Dana\GF15251-PA 1172 GF15251-PA 440..833 74..452 242 24.3 Plus
Dana\Mct1-PA 636 GF22203-PA 426..613 287..473 228 28.7 Plus
Dana\GF10083-PA 826 GF10083-PA 564..762 281..478 207 27.1 Plus
Dana\GF10083-PA 826 GF10083-PA 83..275 73..275 190 28.6 Plus
Dana\Mct1-PA 636 GF22203-PA 19..228 61..276 175 25.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17106-PA 550 GG17106-PA 1..550 1..553 2774 97.3 Plus
Dere\GG10853-PA 656 GG10853-PA 8..235 37..266 264 31.9 Plus
Dere\GG12920-PA 626 GG12920-PA 416..618 287..488 242 28.1 Plus
Dere\GG24964-PA 1120 GG24964-PA 402..795 74..452 233 24.3 Plus
Dere\GG20434-PA 677 GG20434-PA 43..229 73..267 211 29.7 Plus
Dere\GG20434-PA 677 GG20434-PA 468..665 285..481 191 26.8 Plus
Dere\GG12920-PA 626 GG12920-PA 18..231 64..281 188 26.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19581-PA 642 GH19581-PA 1..561 1..539 2095 73.2 Plus
Dgri\GH13504-PA 664 GH13504-PA 52..238 73..266 237 33.5 Plus
Dgri\GH21849-PA 681 GH21849-PA 49..236 73..267 227 31 Plus
Dgri\GH12442-PA 638 GH12442-PA 428..615 287..473 226 29.3 Plus
Dgri\GH13704-PA 1121 GH13704-PA 393..786 74..452 218 24.5 Plus
Dgri\GH12442-PA 638 GH12442-PA 41..242 73..281 193 27.8 Plus
Dgri\GH21849-PA 681 GH21849-PA 472..681 285..499 187 25 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
kar-PA 553 CG12286-PA 1..553 1..553 2859 100 Plus
kar-PB 612 CG12286-PB 1..543 1..543 2813 100 Plus
CG11665-PB 658 CG11665-PB 8..234 37..265 285 33.3 Plus
CG11665-PA 658 CG11665-PA 8..234 37..265 285 33.3 Plus
CG10019-PC 1104 CG10019-PC 384..777 74..452 251 24.3 Plus
CG10019-PB 1104 CG10019-PB 384..777 74..452 251 24.3 Plus
Mct1-PB 626 CG3456-PB 417..603 288..473 250 28.9 Plus
Mct1-PA 626 CG3456-PA 417..603 288..473 250 28.9 Plus
CG13907-PB 816 CG13907-PB 558..751 285..477 240 28.9 Plus
CG13907-PA 816 CG13907-PA 558..751 285..477 240 28.9 Plus
Mct1-PB 626 CG3456-PB 28..231 73..281 239 26.5 Plus
Mct1-PA 626 CG3456-PA 28..231 73..281 239 26.5 Plus
Sln-PA 855 CG8271-PA 224..411 72..265 231 26.8 Plus
CG13907-PB 816 CG13907-PB 71..263 73..275 230 29.1 Plus
CG13907-PA 816 CG13907-PA 71..263 73..275 230 29.1 Plus
CG8468-PB 678 CG8468-PB 43..229 73..267 227 29.7 Plus
CG8468-PA 678 CG8468-PA 43..229 73..267 227 29.7 Plus
CG8468-PC 678 CG8468-PC 43..229 73..267 227 29.7 Plus
CG8468-PB 678 CG8468-PB 469..665 285..480 199 26.4 Plus
CG8468-PA 678 CG8468-PA 469..665 285..480 199 26.4 Plus
CG8468-PC 678 CG8468-PC 469..665 285..480 199 26.4 Plus
chk-PC 894 CG3409-PC 98..300 48..248 196 29.4 Plus
chk-PB 894 CG3409-PB 98..300 48..248 196 29.4 Plus
chk-PA 894 CG3409-PA 98..300 48..248 196 29.4 Plus
CG14196-PA 600 CG14196-PA 37..228 74..272 192 25.6 Plus
CG12866-PC 800 CG12866-PC 242..441 73..279 188 27.5 Plus
CG12866-PB 856 CG12866-PB 298..497 73..279 188 27.5 Plus
out-PB 655 CG8062-PB 39..232 74..274 178 27.4 Plus
out-PA 655 CG8062-PA 39..232 74..274 178 27.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22265-PA 567 GI22265-PA 1..567 1..551 2057 71.8 Plus
Dmoj\GI21795-PA 426 GI21795-PA 39..403 73..473 313 26.1 Plus
Dmoj\GI10224-PA 656 GI10224-PA 50..236 73..266 244 33.5 Plus
Dmoj\GI23919-PA 1179 GI23919-PA 437..830 74..452 225 24.3 Plus
Dmoj\GI19091-PA 683 GI19091-PA 44..231 73..267 207 28.7 Plus
Dmoj\GI19091-PA 683 GI19091-PA 473..674 285..485 183 25.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23116-PA 553 GL23116-PA 1..553 1..553 2361 86.2 Plus
Dper\GL21167-PA 653 GL21167-PA 13..233 37..266 245 30 Plus
Dper\GL18673-PA 1133 GL18673-PA 406..799 74..452 234 24.5 Plus
Dper\GL13330-PA 213 GL13330-PA 1..194 288..480 214 26.8 Plus
Dper\GL16954-PA 817 GL16954-PA 550..744 285..478 210 28.7 Plus
Dper\GL16954-PA 817 GL16954-PA 69..261 73..275 171 27.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11533-PA 553 GA11533-PA 1..553 1..553 2370 86.6 Plus
Dpse\GA11129-PA 653 GA11129-PA 11..233 35..266 250 30.2 Plus
Dpse\GA10013-PA 1142 GA10013-PA 403..796 74..452 235 24.5 Plus
Dpse\GA17462-PA 637 GA17462-PA 424..611 287..473 220 27.7 Plus
Dpse\GA12617-PA 817 GA12617-PA 550..744 285..478 210 28.7 Plus
Dpse\GA17462-PA 637 GA17462-PA 30..233 73..281 194 27 Plus
Dpse\GA12617-PA 817 GA12617-PA 69..261 73..275 170 27.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25990-PA 553 GM25990-PA 1..553 1..553 2821 98 Plus
Dsec\GM16505-PA 658 GM16505-PA 8..235 37..266 280 32.9 Plus
Dsec\GM18432-PA 1115 GM18432-PA 400..793 74..452 234 24.5 Plus
Dsec\GM19211-PA 626 GM19211-PA 416..603 287..473 229 28.7 Plus
Dsec\GM21309-PA 855 GM21309-PA 224..411 72..265 209 26.8 Plus
Dsec\GM19211-PA 626 GM19211-PA 18..231 64..281 190 26.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20550-PA 553 GD20550-PA 1..553 1..553 2850 98.9 Plus
Dsim\GD10355-PA 658 GD10355-PA 8..235 37..266 270 32.4 Plus
Dsim\GD23251-PA 1122 GD23251-PA 405..798 74..452 235 24.5 Plus
Dsim\GD13503-PA 816 GD13503-PA 558..752 285..478 211 29.9 Plus
Dsim\GD11031-PA 734 GD11031-PA 99..285 73..267 204 28.7 Plus
Dsim\GD11031-PA 734 GD11031-PA 525..722 285..481 185 26.3 Plus
Dsim\GD13503-PA 816 GD13503-PA 71..263 73..275 179 29.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24056-PA 575 GJ24056-PA 1..533 1..553 2023 73.3 Plus
Dvir\GJ18014-PA 662 GJ18014-PA 52..238 73..266 241 33.5 Plus
Dvir\GJ16967-PA 632 GJ16967-PA 422..617 287..481 221 28.6 Plus
Dvir\GJ21180-PA 1104 GJ21180-PA 374..767 74..452 221 23.8 Plus
Dvir\GJ20065-PA 686 GJ20065-PA 48..235 73..267 205 27.7 Plus
Dvir\GJ16967-PA 632 GJ16967-PA 1..234 33..281 199 28.4 Plus
Dvir\GJ20065-PA 686 GJ20065-PA 477..678 285..485 196 26.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13560-PA 595 GK13560-PA 1..525 1..539 2067 78.5 Plus
Dwil\GK14778-PA 662 GK14778-PA 8..236 29..266 265 31.1 Plus
Dwil\GK14647-PA 1134 GK14647-PA 385..779 74..452 216 24.9 Plus
Dwil\GK16821-PA 814 GK16821-PA 551..745 285..478 214 30.5 Plus
Dwil\GK16068-PA 621 GK16068-PA 5..225 44..273 213 27.6 Plus
Dwil\GK16068-PA 621 GK16068-PA 409..612 287..487 205 27.9 Plus
Dwil\GK16821-PA 814 GK16821-PA 71..262 73..275 173 29.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:54:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24495-PA 550 GE24495-PA 1..550 1..553 2771 96.9 Plus
Dyak\GE19446-PA 657 GE19446-PA 8..235 37..266 285 33.2 Plus
Dyak\GE18254-PA 1133 GE18254-PA 412..805 74..452 235 24.3 Plus
Dyak\GE14741-PA 210 GE14741-PA 1..187 288..473 220 28.9 Plus
Dyak\GE12384-PA 855 GE12384-PA 224..411 72..265 209 26.8 Plus

RH42588.hyp Sequence

Translation from 194 to 1855

> RH42588.hyp
MAENEPLNDLQSQVNGRILPAANGHTASATNGLVHANGKDAMKPSAPVQN
GNGNANGTHIEAPCCRDIHGKEPPDGGARAWLVMVSAFLCNGIIFGFINT
YGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFSTMAGCLTDKIG
LRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLA
ILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSL
VSAFIILCSFVYKPLHPPPEPPKKKPGRSRINLFLRSIINVEIWKRKRFV
IWALCVPLALFGYFVPYVHMMQFVKTTFPGEDVNLPVMCIGITSGIGRLI
FGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFD
GCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTN
SYTLPLILAGLPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIEIAG
NGHYRSAGTKSSAPLMGATNGINGSAPASPTIQSNGHVDNGTGKLAVTNG
SAS*

RH42588.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:22:02
Subject Length Description Subject Range Query Range Score Percent Strand
kar-PA 553 CG12286-PA 1..553 1..553 2859 100 Plus
kar-PB 612 CG12286-PB 1..543 1..543 2813 100 Plus
CG11665-PB 658 CG11665-PB 8..234 37..265 285 33.3 Plus
CG11665-PA 658 CG11665-PA 8..234 37..265 285 33.3 Plus
Mct1-PB 626 CG3456-PB 417..603 288..473 250 28.9 Plus