RH43429.complete Sequence
426 bp (426 high quality bases) assembled on 2005-02-01
GenBank Submission: BT021227
> RH43429.complete
GATCGCAATCTCTAACGATGAAGTTCCTGGCTATCTGCATTTTTCTAATC
TTCGCCCTGGTGGCCGTTCAGGCACATCCTGGTGGATTCGGCGGATTCGG
TGGAGGCGGTGGTGGCGGTGGTCGCGGTGGAGGCGGTGGAGGCGGTGGAG
TCGGTGGAGTCGGCGGTTCGAACGCAGTTGCCAACGCGAATGCCGCTGCA
ACCGCCGACAGCAGAGGAGGCGGCCCAGCTTCCGCCTCGGCCTCGGCCAC
TGCAACCGCCAACGCCAGCTCCGGAGGAGGTGGAGGTGGACATGGCAGAC
ATGGATAGGCTCGAAACGGATTCATAACTGTACTCTCGAAAAGTGGGCAC
GTCCGCTGACAGACCTACTAAACTGAAACCAATACCAATACCAATAAATA
TTAAAATGCTAAAAAAAAAAAAAAAA
RH43429.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:18:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17107-RA | 433 | CG17107-RA | 3..413 | 2..412 | 2055 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:43:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr2L | 23010047 | chr2L | 10680749..10681148 | 2..410 | 1860 | 97.6 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:29:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:43:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10681975..10682385 | 2..412 | 2055 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:11:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10681975..10682385 | 2..412 | 2055 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 16:43:47 has no hits.
RH43429.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:44:44 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr2L | 10680898..10681148 | 160..410 | 99 | | Plus |
| chr2L | 10680748..10680844 | 1..97 | 98 | == | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:47:02 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 1..291 | 18..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:00 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 1..291 | 18..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:09:08 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 1..291 | 18..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:07:02 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 1..291 | 18..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:48:02 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 1..291 | 18..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:04:27 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 2..411 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:00 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 1..409 | 2..410 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:08 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 9..418 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:07:03 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 2..411 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:48:02 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17107-RA | 9..418 | 1..410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:44:44 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10681974..10682383 | 1..410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:44:44 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10681974..10682383 | 1..410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:44:44 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10681974..10682383 | 1..410 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:08 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10681974..10682383 | 1..410 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:57:35 Download gff for
RH43429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10681974..10682383 | 1..410 | 99 | | Plus |
RH43429.hyp Sequence
Translation from 0 to 375
> RH43429.hyp
IAISNDEVPGYLHFSNLRPGGRSGTSWWIRRIRWRRWWRWSRWRRWRRWS
RWSRRFERSCQRECRCNRRQQRRRPSFRLGLGHCNRQRQLRRRWRWTWQT
WIGSKRIHNCTLEKWARPLTDLLN*
Sequence RH43429.hyp has no blast hits.
RH43429.pep Sequence
Translation from 17 to 307
> RH43429.pep
MKFLAICIFLIFALVAVQAHPGGFGGFGGGGGGGGRGGGGGGGGVGGVGG
SNAVANANAAATADSRGGGPASASASATATANASSGGGGGGHGRHG*
RH43429.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:10:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG23665-PA | 86 | GG23665-PA | 1..61 | 1..70 | 157 | 72.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17107-PC | 96 | CG17107-PC | 1..96 | 1..96 | 506 | 100 | Plus |
| CG17107-PB | 96 | CG17107-PB | 1..96 | 1..96 | 506 | 100 | Plus |
| CG17107-PA | 96 | CG17107-PA | 1..96 | 1..96 | 506 | 100 | Plus |
| CG17105-PB | 103 | CG17105-PB | 1..99 | 1..91 | 175 | 43.4 | Plus |
| CG17105-PA | 103 | CG17105-PA | 1..99 | 1..91 | 175 | 43.4 | Plus |
| CG7299-PC | 177 | CG7299-PC | 92..162 | 22..86 | 171 | 56.3 | Plus |
| CG7299-PC | 177 | CG7299-PC | 98..162 | 22..88 | 171 | 59.7 | Plus |
| CG7299-PA | 177 | CG7299-PA | 92..162 | 22..86 | 171 | 56.3 | Plus |
| CG7299-PA | 177 | CG7299-PA | 98..162 | 22..88 | 171 | 59.7 | Plus |
| CG17108-PA | 342 | CG17108-PA | 271..342 | 23..93 | 168 | 54.2 | Plus |
| CG7294-PA | 127 | CG7294-PA | 47..124 | 22..87 | 159 | 50 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 50..113 | 22..91 | 159 | 50 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 50..113 | 22..91 | 159 | 50 | Plus |
| CG11458-PA | 98 | CG11458-PA | 1..94 | 1..96 | 156 | 37.8 | Plus |
| CG13376-PD | 204 | CG13376-PD | 3..98 | 1..93 | 156 | 36.5 | Plus |
| Ubx-PB | 346 | CG10388-PB | 107..197 | 25..96 | 156 | 42.9 | Plus |
| Ubx-PF | 355 | CG10388-PF | 107..197 | 25..96 | 156 | 42.9 | Plus |
| Ubx-PD | 363 | CG10388-PD | 107..197 | 25..96 | 156 | 42.9 | Plus |
| Ubx-PC | 372 | CG10388-PC | 107..197 | 25..96 | 156 | 42.9 | Plus |
| Ubx-PE | 380 | CG10388-PE | 107..197 | 25..96 | 156 | 42.9 | Plus |
| Ubx-PA | 389 | CG10388-PA | 107..197 | 25..96 | 156 | 42.9 | Plus |
| CG7296-PB | 161 | CG7296-PB | 87..158 | 22..87 | 152 | 56 | Plus |
| CG7296-PA | 161 | CG7296-PA | 87..158 | 22..87 | 152 | 56 | Plus |
| CG13376-PB | 200 | CG13376-PB | 5..94 | 6..93 | 152 | 40 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 339..424 | 22..93 | 151 | 41.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 336..410 | 21..96 | 151 | 43.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 336..410 | 21..96 | 151 | 43.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 339..424 | 22..93 | 151 | 41.9 | Plus |
| CG17108-PA | 342 | CG17108-PA | 139..219 | 20..96 | 150 | 44.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 306..389 | 22..96 | 150 | 40.5 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 306..389 | 22..96 | 150 | 40.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 245..328 | 18..96 | 149 | 41.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 345..429 | 22..96 | 149 | 42.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 245..328 | 18..96 | 149 | 41.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 345..429 | 22..96 | 149 | 42.4 | Plus |
| CG17108-PA | 342 | CG17108-PA | 225..297 | 22..93 | 148 | 42.5 | Plus |
| CG4038-PA | 237 | CG4038-PA | 179..236 | 22..94 | 147 | 47.9 | Plus |
| zld-PF | 1367 | CG12701-PF | 16..76 | 13..72 | 147 | 52.5 | Plus |
| zld-PD | 1373 | CG12701-PD | 16..76 | 13..72 | 147 | 52.5 | Plus |
| zld-PG | 1596 | CG12701-PG | 16..76 | 13..72 | 147 | 52.5 | Plus |
| zld-PA | 1596 | CG12701-PA | 16..76 | 13..72 | 147 | 52.5 | Plus |
| zld-PB | 1596 | CG12701-PB | 16..76 | 13..72 | 147 | 52.5 | Plus |
| CG7294-PA | 127 | CG7294-PA | 38..108 | 22..91 | 146 | 47.2 | Plus |
| CG2150-PA | 188 | CG2150-PA | 6..106 | 8..96 | 146 | 42.7 | Plus |
| Fib-PA | 344 | CG9888-PA | 8..85 | 21..96 | 146 | 43.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 270..361 | 22..96 | 145 | 41.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 270..361 | 22..96 | 145 | 41.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 437..515 | 21..96 | 145 | 43.8 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 374..449 | 22..96 | 144 | 44.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 374..449 | 22..96 | 144 | 44.7 | Plus |
| CG5172-PC | 106 | CG5172-PC | 1..84 | 1..93 | 144 | 36.6 | Plus |
| CG13376-PC | 193 | CG13376-PC | 6..87 | 13..93 | 144 | 40.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 407..489 | 22..96 | 143 | 42.7 | Plus |
| Fib-PA | 344 | CG9888-PA | 49..112 | 22..80 | 143 | 48.4 | Plus |
| TwdlT-PA | 286 | CG5812-PA | 26..94 | 21..96 | 143 | 46.1 | Plus |
| CG17108-PA | 342 | CG17108-PA | 163..234 | 21..96 | 142 | 43.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 401..478 | 21..96 | 142 | 44.3 | Plus |
| caz-PD | 355 | CG3606-PD | 263..335 | 26..96 | 142 | 43.8 | Plus |
| caz-PC | 384 | CG3606-PC | 292..364 | 26..96 | 142 | 43.8 | Plus |
| caz-PB | 399 | CG3606-PB | 307..379 | 26..96 | 142 | 43.8 | Plus |
| na-PG | 2224 | CG1517-PG | 21..80 | 28..95 | 142 | 50 | Plus |
| na-PF | 2233 | CG1517-PF | 21..80 | 28..95 | 142 | 50 | Plus |
| CG13376-PD | 204 | CG13376-PD | 58..139 | 14..96 | 141 | 41 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 262..345 | 23..96 | 141 | 42.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 262..345 | 23..96 | 141 | 42.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 467..550 | 21..96 | 141 | 40 | Plus |
| CG13376-PB | 200 | CG13376-PB | 54..135 | 14..96 | 141 | 41 | Plus |
| CG13376-PC | 193 | CG13376-PC | 47..128 | 14..96 | 141 | 41 | Plus |
| Fib-PA | 344 | CG9888-PA | 17..90 | 22..96 | 140 | 45.5 | Plus |
| CG5172-PD | 172 | CG5172-PD | 10..99 | 6..96 | 140 | 38.5 | Plus |
| CG10918-PA | 183 | CG10918-PA | 4..89 | 3..96 | 140 | 39.2 | Plus |
| TwdlT-PA | 286 | CG5812-PA | 42..116 | 22..96 | 140 | 41.3 | Plus |
| CG9083-PB | 317 | CG9083-PB | 28..109 | 15..96 | 139 | 40.2 | Plus |
| CG4038-PA | 237 | CG4038-PA | 12..58 | 22..94 | 138 | 47.9 | Plus |
| CG14742-PA | 74 | CG14742-PA | 6..71 | 22..91 | 138 | 45.7 | Plus |
| CG5172-PD | 172 | CG5172-PD | 65..158 | 22..96 | 138 | 38.3 | Plus |
| CG5172-PD | 172 | CG5172-PD | 93..169 | 22..96 | 138 | 40.3 | Plus |
| TwdlT-PA | 286 | CG5812-PA | 50..127 | 22..96 | 137 | 42.3 | Plus |
| CG8157-PB | 113 | CG8157-PB | 1..102 | 1..95 | 137 | 38.5 | Plus |
| CG8157-PA | 113 | CG8157-PA | 1..102 | 1..95 | 137 | 38.5 | Plus |
| CG13376-PD | 204 | CG13376-PD | 83..163 | 22..96 | 136 | 43.2 | Plus |
| CG13376-PB | 200 | CG13376-PB | 79..159 | 22..96 | 136 | 43.2 | Plus |
| CG13376-PC | 193 | CG13376-PC | 72..152 | 22..96 | 136 | 43.2 | Plus |
| CG9877-PA | 88 | CG9877-PA | 7..85 | 3..91 | 131 | 41.1 | Plus |
