BDGP Sequence Production Resources |
Search the DGRC for RH43654
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 436 |
Well: | 54 |
Vector: | pFlc-1 |
Associated Gene/Transcript | mRpL9-RA |
Protein status: | RH43654.pep: gold |
Preliminary Size: | 1065 |
Sequenced Size: | 805 |
Gene | Date | Evidence |
---|---|---|
CG4923 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31478 | 2002-05-21 | Blastp of sequenced clone |
CG31478 | 2003-01-01 | Sim4 clustering to Release 3 |
mRpL9 | 2008-04-29 | Release 5.5 accounting |
mRpL9 | 2008-08-15 | Release 5.9 accounting |
mRpL9 | 2008-12-18 | 5.12 accounting |
805 bp (805 high quality bases) assembled on 2002-05-21
GenBank Submission: AY118435
> RH43654.complete GATTGGTGGTAAAAATGTTGAAGAACATCTACGTAACGCCGTTAAATTTG CTTAAATCGGCCACCAGCCTGCAGCAGCAAGTGCGGACCACGTTCGTCCT GAAGCGCAAATATGACCCGCCGCTGCACAAAACCAACGAGAAACCCCGCC GGATGAGGGCCAAGAACTTCATCTACGAGCTCGTGGACGACACGCTGGTC AAAAAGCGGCCCAACATCGAGGTGGTGCTAAAGACCTTCGTCGAGGGCGT TGGCGACAAGGGCGACGTGGTGTCAATGAAGCCGCACTTTGTCTACAATA AGCTCCTGCTGCCGGGTTTGGCCGCGTACAATACGCCGGAGAATGTGGCC AAGTACGCCAAGACAGAGGCTGAAAAATCGACTGTTAAACACAGCTCCCC CTACGCCCAGCGCACGGTCAACATGCTGGAGACCATTGTGCTGGCGGTGG TCATGAACAAGGATGAGCCATGGGTGCTCGAGCCCTGGCACATCAAGGCC TCGCTGCGCAAGACTGGGTTCTATTGTCGCGAGGAGTGCATTACCCTGCC CAAGGAGCGCATCGAGGGACCCGACCTGAAGAAGGAGAACAAGGACTTCT ACTGCACTGTGACCATAAACAAGCTGGAACAGGCGCGACTCAAGTGTCGT CTGCACCACTGGAGCACAGATCCCAGCGAACGGCTGCCTTACGTACTCGA GCACTGGAAACTCCAGTCTGAGCCCCTGCTGGATGTATGTTCACCCGAAA AAACCCCTTAGAGACCCCATACCAAATACATGCGATTGTTACAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL9-RA | 897 | mRpL9-RA | 76..870 | 2..796 | 3975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11155366..11155451 | 1..86 | 98 | -> | Plus |
chr3R | 11155509..11156214 | 87..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 1..747 | 15..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 1..747 | 15..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 1..747 | 15..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 1..747 | 15..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 1..747 | 15..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 2..792 | 2..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 2..792 | 2..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 3..794 | 1..792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 2..792 | 2..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL9-RA | 3..794 | 1..792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15330740..15330825 | 1..86 | 98 | -> | Plus |
3R | 15330883..15331588 | 87..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15330740..15330825 | 1..86 | 98 | -> | Plus |
3R | 15330883..15331588 | 87..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15330740..15330825 | 1..86 | 98 | -> | Plus |
3R | 15330883..15331588 | 87..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11156462..11156547 | 1..86 | 98 | -> | Plus |
arm_3R | 11156605..11157310 | 87..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15071714..15072419 | 87..792 | 100 | Plus | |
3R | 15071571..15071656 | 1..86 | 98 | -> | Plus |
Translation from 2 to 760
> RH43654.hyp LVVKMLKNIYVTPLNLLKSATSLQQQVRTTFVLKRKYDPPLHKTNEKPRR MRAKNFIYELVDDTLVKKRPNIEVVLKTFVEGVGDKGDVVSMKPHFVYNK LLLPGLAAYNTPENVAKYAKTEAEKSTVKHSSPYAQRTVNMLETIVLAVV MNKDEPWVLEPWHIKASLRKTGFYCREECITLPKERIEGPDLKKENKDFY CTVTINKLEQARLKCRLHHWSTDPSERLPYVLEHWKLQSEPLLDVCSPEK TP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL9-PA | 248 | CG31478-PA | 1..248 | 5..252 | 1315 | 100 | Plus |
Translation from 14 to 760
> RH43654.pep MLKNIYVTPLNLLKSATSLQQQVRTTFVLKRKYDPPLHKTNEKPRRMRAK NFIYELVDDTLVKKRPNIEVVLKTFVEGVGDKGDVVSMKPHFVYNKLLLP GLAAYNTPENVAKYAKTEAEKSTVKHSSPYAQRTVNMLETIVLAVVMNKD EPWVLEPWHIKASLRKTGFYCREECITLPKERIEGPDLKKENKDFYCTVT INKLEQARLKCRLHHWSTDPSERLPYVLEHWKLQSEPLLDVCSPEKTP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23199-PA | 252 | GF23199-PA | 1..248 | 1..248 | 1231 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16914-PA | 248 | GG16914-PA | 1..246 | 1..246 | 1249 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19122-PA | 253 | GH19122-PA | 1..245 | 1..245 | 1120 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL9-PA | 248 | CG31478-PA | 1..248 | 1..248 | 1315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10854-PA | 257 | GI10854-PA | 1..245 | 1..245 | 1084 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23242-PA | 251 | GL23242-PA | 1..246 | 1..246 | 1186 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16276-PA | 251 | GA16276-PA | 1..246 | 1..246 | 1185 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24221-PA | 248 | GM24221-PA | 1..246 | 1..246 | 1262 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19012-PA | 248 | GD19012-PA | 1..246 | 1..246 | 1263 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14462-PA | 256 | GJ14462-PA | 1..245 | 1..245 | 1165 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11133-PA | 251 | GK11133-PA | 1..246 | 1..244 | 1116 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24297-PA | 248 | GE24297-PA | 1..247 | 1..247 | 1258 | 94.7 | Plus |