BDGP Sequence Production Resources |
Search the DGRC for RH44722
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 447 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17065-RA |
Protein status: | RH44722.pep: gold |
Preliminary Size: | 1332 |
Sequenced Size: | 1573 |
Gene | Date | Evidence |
---|---|---|
CG17065 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17065 | 2002-02-27 | Blastp of sequenced clone |
CG17065 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17065 | 2008-04-29 | Release 5.5 accounting |
CG17065 | 2008-08-15 | Release 5.9 accounting |
CG17065 | 2008-12-18 | 5.12 accounting |
1573 bp (1573 high quality bases) assembled on 2002-02-27
GenBank Submission: AY089672
> RH44722.complete GTCAGTTTAGTTTACGCTCCCCTGTTTATTTGCGAGCCATCGCTCATTCC GCCCGCAACGCCAGCCCCGCCCCCTGCGCTCCGCAGCCCCCACCAATGGA CGTTCGGATTAAGTGCAACAGCGAGGAGCCAGAGTCTCCGGAGCAGAAGA TCCTGGCGAGCAGCCAGCGCCTGCTGCAGTTCACCAACTGCCGCCTTGTA CGCGACCACCGGATCATCCACGACGATCTGTGGGTTCGCGACGGTCGGAT CGTGAACCCAGAGCCTGTGTTCTTCGACGAGCGGACCAAGGCCCACTGTC GCATCGACTGCGGGGGCGCCATCATCGCGCCCGGCTACATCGACCTCCAG ATCAATGGTGGCTATGGCGTGGACTTCTCGTACGACACGGAGACCATCGA GGAGGGCGTGGCCACGGTGGCACGCGGCCTGGTCAAGAGCGGAGTCACCT CCTTCTGTCCCACGCTGGTGACCTCGCCCAGCGACAGCTACCACACCATC CTGCCGCGCATTCCCGCAGAGGTTCCCAAGGGCGCCGGCATACTGGGCAT CCATGCGGAGGGTCCGTTTATCAATCCGCAGAAAAAGGGCGCGCATCCGG AGCACTGCATCCAGACCATTGATAAGGGACTCAGCACGCTGAAGGAGACG TACGGCTCGCTGGAACGCATTAAAATCATCACCCTGGCGCCGGAGAAGGT CACCGACCCGGAGGTGATTGGCCAGCTGGTGGAGCGTGGCATCACCGTGG CCCTGGGCCACTCGATGGCCTCGCTAAGCGACGGAGAGAGGGCCGTGCAG CAGGGCGCCACGCTGATCACGCATCTGTTCAACGCCATGCTGCCGTTCCA TCACCGCGATCCCGGCCTGGTGGGACTGCTGGCCTCGGACGCAGTGCCGC ACGGTAGGACCGTGTACTTCGGCATCATCTCGGACGGAGTGCACACTCAT CCGGCGGCACTGAGGATCGCCTACCGCACGCATCCGCAGGGCCTGATCCT GGTGACGGACGCCATATCGGCGCTGGGCCTCGAGGAGGGTGTCCACCACA TCGGACAGCTGCCGCTGCAGGTTAAGCAGGGCAAGGCGTTCATCGCAGGC ACAGAGACGCTGTGCGGCAGCATCGCCCCGATGGACGAGTGCGTGCGGAT CTTCCAGAAGGCGACCGACTGCTCCGTGGTCTATGCCATCGAGGCGGCCA CCTTGCATCCAGCACAGTGCCTGAAGATCGAAAAGCAGAAGGGCACCCTG GACTTTGGCTCGGACGCGGACTTCGTTCTCCTGGACGACCAGCTCCGGGT GCTATCCACCTGGATCGCTGGCGTATGTGTTCATAGGACTGTCAAGTAGC GCATCGAATGTGCAACTGTTGCAATTGTTTTTATTTACCTGATGCAGGAT GCAGGATTCTACACCGAAGATTCTCCAAATAAATTGTTAAACTTATACAT TCCAATTGAAGGAGCTTGAGATTCTTGTGAGTGCAGCCAAGGATGTTCAA ATGAATTGTTTAACGATGATTGTTTGCCATTTGAAATAAGGAATCACTCA CTGGTTTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17065-RA | 1755 | CG17065-RA | 188..1744 | 2..1558 | 7785 | 100 | Plus |
CG17065-RB | 1598 | CG17065-RB | 665..1598 | 624..1557 | 4670 | 100 | Plus |
CG17065-RB | 1598 | CG17065-RB | 1..625 | 2..626 | 3125 | 100 | Plus |
Rab10-RA | 2392 | Rab10-RA | 2286..2392 | 1558..1452 | 535 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20120657..20121200 | 1167..624 | 2705 | 99.8 | Minus |
chrX | 22417052 | chrX | 20120217..20120607 | 1557..1167 | 1955 | 100 | Minus |
chrX | 22417052 | chrX | 20122298..20122656 | 360..2 | 1780 | 99.7 | Minus |
chrX | 22417052 | chrX | 20121288..20121558 | 627..357 | 1355 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20255132..20255675 | 1167..624 | 2720 | 100 | Minus |
X | 23542271 | X | 20254691..20255082 | 1558..1167 | 1960 | 100 | Minus |
X | 23542271 | X | 20256773..20257131 | 360..2 | 1795 | 100 | Minus |
X | 23542271 | X | 20255763..20256033 | 627..357 | 1355 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20240223..20240766 | 1167..624 | 2720 | 100 | Minus |
X | 23527363 | X | 20239782..20240173 | 1558..1167 | 1960 | 100 | Minus |
X | 23527363 | X | 20241864..20242222 | 360..2 | 1795 | 100 | Minus |
X | 23527363 | X | 20240854..20241124 | 627..357 | 1355 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20120217..20120606 | 1168..1557 | 100 | <- | Minus |
chrX | 20120657..20121197 | 627..1167 | 99 | <- | Minus |
chrX | 20121289..20121557 | 358..626 | 100 | <- | Minus |
chrX | 20122301..20122655 | 1..357 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1254 | 96..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1556 | 2..1557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1556 | 2..1557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1556 | 2..1557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1556 | 2..1557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17065-RA | 1..1556 | 2..1557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20254692..20255081 | 1168..1557 | 100 | <- | Minus |
X | 20255132..20255672 | 627..1167 | 100 | <- | Minus |
X | 20255764..20256032 | 358..626 | 100 | <- | Minus |
X | 20256776..20257131 | 1..357 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20254692..20255081 | 1168..1557 | 100 | <- | Minus |
X | 20255132..20255672 | 627..1167 | 100 | <- | Minus |
X | 20255764..20256032 | 358..626 | 100 | <- | Minus |
X | 20256776..20257131 | 1..357 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20254692..20255081 | 1168..1557 | 100 | <- | Minus |
X | 20255132..20255672 | 627..1167 | 100 | <- | Minus |
X | 20255764..20256032 | 358..626 | 100 | <- | Minus |
X | 20256776..20257131 | 1..357 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20125718..20126107 | 1168..1557 | 100 | <- | Minus |
arm_X | 20126158..20126698 | 627..1167 | 100 | <- | Minus |
arm_X | 20126790..20127058 | 358..626 | 100 | <- | Minus |
arm_X | 20127802..20128157 | 1..357 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20239783..20240172 | 1168..1557 | 100 | <- | Minus |
X | 20240223..20240763 | 627..1167 | 100 | <- | Minus |
X | 20240855..20241123 | 358..626 | 100 | <- | Minus |
X | 20241867..20242222 | 1..357 | 99 | Minus |
Translation from 2 to 1348
> RH44722.hyp QFSLRSPVYLRAIAHSARNASPAPCAPQPPPMDVRIKCNSEEPESPEQKI LASSQRLLQFTNCRLVRDHRIIHDDLWVRDGRIVNPEPVFFDERTKAHCR IDCGGAIIAPGYIDLQINGGYGVDFSYDTETIEEGVATVARGLVKSGVTS FCPTLVTSPSDSYHTILPRIPAEVPKGAGILGIHAEGPFINPQKKGAHPE HCIQTIDKGLSTLKETYGSLERIKIITLAPEKVTDPEVIGQLVERGITVA LGHSMASLSDGERAVQQGATLITHLFNAMLPFHHRDPGLVGLLASDAVPH GRTVYFGIISDGVHTHPAALRIAYRTHPQGLILVTDAISALGLEEGVHHI GQLPLQVKQGKAFIAGTETLCGSIAPMDECVRIFQKATDCSVVYAIEAAT LHPAQCLKIEKQKGTLDFGSDADFVLLDDQLRVLSTWIAGVCVHRTVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17065-PD | 417 | CG17065-PD | 1..417 | 32..448 | 2180 | 100 | Plus |
CG17065-PA | 417 | CG17065-PA | 1..417 | 32..448 | 2180 | 100 | Plus |
CG17065-PB | 431 | CG17065-PB | 1..431 | 32..448 | 2155 | 96.8 | Plus |
Translation from 95 to 1348
> RH44722.pep MDVRIKCNSEEPESPEQKILASSQRLLQFTNCRLVRDHRIIHDDLWVRDG RIVNPEPVFFDERTKAHCRIDCGGAIIAPGYIDLQINGGYGVDFSYDTET IEEGVATVARGLVKSGVTSFCPTLVTSPSDSYHTILPRIPAEVPKGAGIL GIHAEGPFINPQKKGAHPEHCIQTIDKGLSTLKETYGSLERIKIITLAPE KVTDPEVIGQLVERGITVALGHSMASLSDGERAVQQGATLITHLFNAMLP FHHRDPGLVGLLASDAVPHGRTVYFGIISDGVHTHPAALRIAYRTHPQGL ILVTDAISALGLEEGVHHIGQLPLQVKQGKAFIAGTETLCGSIAPMDECV RIFQKATDCSVVYAIEAATLHPAQCLKIEKQKGTLDFGSDADFVLLDDQL RVLSTWIAGVCVHRTVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20445-PA | 410 | GF20445-PA | 14..408 | 21..415 | 1912 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18004-PA | 417 | GG18004-PA | 1..417 | 1..417 | 2077 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12083-PA | 401 | GH12083-PA | 5..397 | 22..414 | 1751 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17065-PD | 417 | CG17065-PD | 1..417 | 1..417 | 2180 | 100 | Plus |
CG17065-PA | 417 | CG17065-PA | 1..417 | 1..417 | 2180 | 100 | Plus |
CG17065-PB | 431 | CG17065-PB | 1..431 | 1..417 | 2155 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11091-PA | 401 | GI11091-PA | 6..399 | 22..415 | 1692 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12914-PA | 342 | GL12914-PA | 13..342 | 88..417 | 1477 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14308-PA | 407 | GA14308-PA | 15..407 | 25..417 | 1811 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22684-PA | 417 | GM22684-PA | 1..417 | 1..417 | 2150 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15776-PA | 406 | GJ15776-PA | 1..401 | 3..414 | 1785 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10075-PA | 415 | GK10075-PA | 22..411 | 25..414 | 1773 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15361-PA | 419 | GE15361-PA | 1..419 | 1..417 | 2066 | 93.8 | Plus |