BDGP Sequence Production Resources |
Search the DGRC for RH44874
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 448 |
Well: | 74 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15385-RA |
Protein status: | RH44874.pep: gold |
Preliminary Size: | 1764 |
Sequenced Size: | 2652 |
Gene | Date | Evidence |
---|---|---|
CG15385 | 2001-12-17 | Blastp of sequenced clone |
CG15385 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15385 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15385 | 2008-04-29 | Release 5.5 accounting |
CG15385 | 2008-08-15 | Release 5.9 accounting |
CG15385 | 2008-12-18 | 5.12 accounting |
2652 bp (2652 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071729
> RH44874.complete GGTTTTTTCTACACTTAGCATTAAAAAAGCAATCCCCGTGCAGCGGAGCT CTAGCCTGAAATTTAAGCACTGGATAGGAGTATATCAGAGCTATCGTATC GACAGAAACCCTCCAGGAGTGCCGCCCAACGAGTTGATGCCGAGGAGCAG CAGTGGAGCTAGCGGGCAGCAGTTAAGAGCCGGACTTTCTGGCCAGGATG AGGCTGCTCAAGGAACTGATGCGAGTGGCCACCCAACACAGAGCCTTCTA CTGCTATGTGCTGCTCAGCGTCTGGATATTCCTTCTTATAGCGGGAATGT ATCGCTACATGGGCAATGTTGAGTCGACTCCAAGCGGTGGCTCAGTTTTC GGACCCAGTTCGTCTGGCACCGTCAGTTCCTTGGGCGGCGATAGTTCGCC ATCTTCCACTGCCCAGCGATTCGCCAAGTACAGAGAACGCTGTGCTCCGT TGGCTCAGCTGCAGCGTTTGGATGATGGCGGCATCTTGGAGGGTTGGAAG CTTCAGGGCGTGCTCCTGGTCATCAGGCACGGGGATCGGGGACCCATATC CCACGTTCGCAGTGCTGGCATCAACTGCGGCGTGAGTGGTGGCTCAGATA ACTTGGTCAACAGGTATCGCAGTTTTCTGTATAACTCGAGCAGCTCCGCT TCGGGATCAAATCACATGTACTGGAACAAGGTGGGGCCGTTCCATGGGTT TCCACTGCTGCCGGCCACAGAACGTGGTTGTCCACTGGGGCAGCTCACCT ACAAGGGAATCTCGCAGCTGCTACACGTGGGCGACATCATGCACCAGGTC TATGCTCATCCACTGGGTCTCCTGCTCAAACCGAATCCGAACCGAGCCTC TGTGGAAACGACGCCCCACACGCTTCTTAATTCGGATGAAGTGGTGGTCT TCACCACTCGCTATCGTCGCACCTTCCAGTCCGCATTGGCCATGCTGTTC ACCTTGCTTCCGGCGGACAAGTGGCTGGCTTTGAATGTCCGGGAATCGCA TAGCATGGCTTTCTGCTTCGGCGAGTGCAGCTGTCCTCAGTCGGCTCTGC TGCGAAAACGTCTGGAGGCCATGGGTGATAAGCAGCTCCTGAAACGTGGC GATGTCCTGGATGTGATGCAGTGGATCGGAGGCACCATACTGCAGCACAC GCCGAATGGCATTAGCAATCCCTTCGAGGTGGTGGATGCCCTTTTGACAG TTCTATGCCATGACGCCACCTTGCCATGTCGCAGGAAAAAAGCGCTTTCC ACTCCAAAGCCCCTCAGAAAGAACTCCAATCAGGAACTGGTGGATGTGAT CAATATAGATCAGGATGAAACAGCTGCCAACTTGATGCAGGAGGCACAAA CACAGGTGGAACCCGACTCCCCTGAGGTGGAAAATGGGAATCCCTCAGTG CAGGCGGATGAAGCTCAAGAGGGCTGCGTCGAGCCCAGCCACGTGGATAC CCTGATGTCCTTTGCGGACGAACTATCGCAACGCTCCGCTGGTCACTCGT ACTACAAGCTATCCGGATTGCTGCGATCCTACGGAATGATCCGTCACATA GTCAGCTACATGCTGAAGATGATCTCTGGCGACAGGACGAAGTTTGTCCT GTACTCTGGACACGACTGCACCATGCAGTATCTTACAGCTGCCCTGGGAA TCATCACCAACCAGGGCCAAACCATAGCCTATGCCTCCAGACTAGCATTC GAAGTTTACCGGAGCGACGCTCACACGGATTACTACTTCCGGGTGGTGTA CAATGGAAAGGATGTCACGCAGCAGATCGATTTCTGCGAGGGAGGCAAAA GCCTACGGGTCACCAGGGATTCCAGGGGCAACAAAGCCGATCTCTGTCCC ATCGAGAACATCATTCGCTTCCTGCACGAAGATTACTTCAGTCCGCTGAA TGCCACCAATTTTAAGGAAGCCTGTGGCTCTGTGAATCCCCCAAAAACTG GCGAATTTTAGCAGCCCGCCCAGGTGATGAGTAGGAGATCCCTTTTATAA AACTGTGATAAGTAGTTTAGATGCCACACATGAAAAGAAGAGCACTATGT CCAGTCTTATCCCGAACTGGAAACGACCGCTTATTAGCGATGTTATCTAA TTAGTTGGAATTTAGTTAATGCATTCAACTTGTTGATCCACAAATCGAAA ACGATACATATCAATGGAGCACTTGTTAGACTATAAGAACCTCTTTCTAA AAATCTAGCAATACGGAAATGAAACTTGATGTCGCAAACATATCAGCTTT TTGAAGTTTATTATAAAAAAAATCTTAGGAAAACCCTTCCACAAATTTTA GCATTTATAACATATTTTTATGAACATATCAAAGCAAAGAGTAAAAGAAC TCTAGGAAGATGCGAATTTTTAGTTCTTGATTAAATACCGTAAAATAACA ATTTTTTAATATACATATAAATAATTAGCAAATAAAAAATTTCAAAATTT CCACGAATTCGTTAAATCTAAATTGAGATCTTATAAGCATACTATTAATA TTATTAATATCCATCTGGAAACAACACAAAAAACCGAAACGCAAACATAT CATGCCCAAAGTAATATTTTTAAGAGATAAATTGTAAATGTGGATACTAC AGAAGTTTTAAATTGAAATAAATGTTCTCGAATTTTAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15385-RA | 2681 | CG15385-RA | 45..2681 | 2..2638 | 13185 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2209305..2210602 | 2636..1338 | 6280 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 2210654..2211240 | 1341..755 | 2935 | 100 | Minus |
chr2L | 23010047 | chr2L | 2211501..2211822 | 615..294 | 1610 | 100 | Minus |
chr2L | 23010047 | chr2L | 2212008..2212301 | 295..2 | 1470 | 100 | Minus |
chr2L | 23010047 | chr2L | 2211306..2211449 | 755..612 | 705 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2209572..2210872 | 2638..1338 | 6505 | 100 | Minus |
2L | 23513712 | 2L | 2210924..2211510 | 1341..755 | 2935 | 100 | Minus |
2L | 23513712 | 2L | 2211771..2212092 | 615..294 | 1610 | 100 | Minus |
2L | 23513712 | 2L | 2212278..2212571 | 295..2 | 1470 | 100 | Minus |
2L | 23513712 | 2L | 2211576..2211719 | 755..612 | 720 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2209572..2210872 | 2638..1338 | 6505 | 100 | Minus |
2L | 23513712 | 2L | 2210924..2211510 | 1341..755 | 2935 | 100 | Minus |
2L | 23513712 | 2L | 2211771..2212092 | 615..294 | 1610 | 100 | Minus |
2L | 23513712 | 2L | 2212278..2212571 | 295..2 | 1470 | 100 | Minus |
2L | 23513712 | 2L | 2211576..2211719 | 755..612 | 720 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAHRE | 10463 | TAHRE OSV 10463bp | 6702..6797 | 2418..2510 | 139 | 66.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2211503..2211821 | 295..613 | 100 | <- | Minus |
chr2L | 2209305..2210599 | 1341..2636 | 99 | <- | Minus |
chr2L | 2210655..2211240 | 755..1340 | 100 | <- | Minus |
chr2L | 2211307..2211447 | 614..754 | 99 | <- | Minus |
chr2L | 2212009..2212301 | 1..294 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..1764 | 198..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..1764 | 198..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..1764 | 198..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..1764 | 198..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..1764 | 198..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..2635 | 2..2636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..2635 | 2..2636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..2635 | 2..2636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..2635 | 2..2636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15385-RA | 1..2635 | 2..2636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2209574..2210869 | 1341..2636 | 100 | <- | Minus |
2L | 2210925..2211510 | 755..1340 | 100 | <- | Minus |
2L | 2211577..2211717 | 614..754 | 100 | <- | Minus |
2L | 2211773..2212091 | 295..613 | 100 | <- | Minus |
2L | 2212279..2212571 | 1..294 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2209574..2210869 | 1341..2636 | 100 | <- | Minus |
2L | 2210925..2211510 | 755..1340 | 100 | <- | Minus |
2L | 2211577..2211717 | 614..754 | 100 | <- | Minus |
2L | 2211773..2212091 | 295..613 | 100 | <- | Minus |
2L | 2212279..2212571 | 1..294 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2209574..2210869 | 1341..2636 | 100 | <- | Minus |
2L | 2210925..2211510 | 755..1340 | 100 | <- | Minus |
2L | 2211577..2211717 | 614..754 | 100 | <- | Minus |
2L | 2211773..2212091 | 295..613 | 100 | <- | Minus |
2L | 2212279..2212571 | 1..294 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2209574..2210869 | 1341..2636 | 100 | <- | Minus |
arm_2L | 2210925..2211510 | 755..1340 | 100 | <- | Minus |
arm_2L | 2211577..2211717 | 614..754 | 100 | <- | Minus |
arm_2L | 2211773..2212091 | 295..613 | 100 | <- | Minus |
arm_2L | 2212279..2212571 | 1..294 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2209574..2210869 | 1341..2636 | 100 | <- | Minus |
2L | 2210925..2211510 | 755..1340 | 100 | <- | Minus |
2L | 2211577..2211717 | 614..754 | 100 | <- | Minus |
2L | 2211773..2212091 | 295..613 | 100 | <- | Minus |
2L | 2212279..2212571 | 1..294 | 99 | Minus |
Translation from 197 to 1960
> RH44874.pep MRLLKELMRVATQHRAFYCYVLLSVWIFLLIAGMYRYMGNVESTPSGGSV FGPSSSGTVSSLGGDSSPSSTAQRFAKYRERCAPLAQLQRLDDGGILEGW KLQGVLLVIRHGDRGPISHVRSAGINCGVSGGSDNLVNRYRSFLYNSSSS ASGSNHMYWNKVGPFHGFPLLPATERGCPLGQLTYKGISQLLHVGDIMHQ VYAHPLGLLLKPNPNRASVETTPHTLLNSDEVVVFTTRYRRTFQSALAML FTLLPADKWLALNVRESHSMAFCFGECSCPQSALLRKRLEAMGDKQLLKR GDVLDVMQWIGGTILQHTPNGISNPFEVVDALLTVLCHDATLPCRRKKAL STPKPLRKNSNQELVDVINIDQDETAANLMQEAQTQVEPDSPEVENGNPS VQADEAQEGCVEPSHVDTLMSFADELSQRSAGHSYYKLSGLLRSYGMIRH IVSYMLKMISGDRTKFVLYSGHDCTMQYLTAALGIITNQGQTIAYASRLA FEVYRSDAHTDYYFRVVYNGKDVTQQIDFCEGGKSLRVTRDSRGNKADLC PIENIIRFLHEDYFSPLNATNFKEACGSVNPPKTGEF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15300-PA | 590 | GF15300-PA | 1..590 | 1..587 | 2852 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24549-PA | 587 | GG24549-PA | 1..587 | 1..587 | 3097 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11471-PA | 600 | GH11471-PA | 4..600 | 3..587 | 2179 | 73.4 | Plus |
Dgri\GH11473-PA | 297 | GH11473-PA | 1..253 | 117..369 | 772 | 66.4 | Plus |
Dgri\GH12983-PA | 187 | GH12983-PA | 4..187 | 3..186 | 688 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15385-PB | 587 | CG15385-PB | 1..587 | 1..587 | 3084 | 100 | Plus |
CG15385-PA | 587 | CG15385-PA | 1..587 | 1..587 | 3084 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16940-PA | 592 | GI16940-PA | 4..592 | 3..587 | 2237 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19417-PA | 588 | GL19417-PA | 1..588 | 1..587 | 2640 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13691-PA | 588 | GA13691-PA | 1..588 | 1..587 | 2633 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18257-PA | 587 | GM18257-PA | 1..587 | 1..587 | 3127 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22866-PA | 587 | GD22866-PA | 1..587 | 1..587 | 3144 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17212-PA | 589 | GJ17212-PA | 4..589 | 3..587 | 2240 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15134-PA | 599 | GK15134-PA | 4..599 | 3..587 | 2384 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15205-PA | 587 | GE15205-PA | 1..587 | 1..587 | 3098 | 97.4 | Plus |
Translation from 197 to 1960
> RH44874.hyp MRLLKELMRVATQHRAFYCYVLLSVWIFLLIAGMYRYMGNVESTPSGGSV FGPSSSGTVSSLGGDSSPSSTAQRFAKYRERCAPLAQLQRLDDGGILEGW KLQGVLLVIRHGDRGPISHVRSAGINCGVSGGSDNLVNRYRSFLYNSSSS ASGSNHMYWNKVGPFHGFPLLPATERGCPLGQLTYKGISQLLHVGDIMHQ VYAHPLGLLLKPNPNRASVETTPHTLLNSDEVVVFTTRYRRTFQSALAML FTLLPADKWLALNVRESHSMAFCFGECSCPQSALLRKRLEAMGDKQLLKR GDVLDVMQWIGGTILQHTPNGISNPFEVVDALLTVLCHDATLPCRRKKAL STPKPLRKNSNQELVDVINIDQDETAANLMQEAQTQVEPDSPEVENGNPS VQADEAQEGCVEPSHVDTLMSFADELSQRSAGHSYYKLSGLLRSYGMIRH IVSYMLKMISGDRTKFVLYSGHDCTMQYLTAALGIITNQGQTIAYASRLA FEVYRSDAHTDYYFRVVYNGKDVTQQIDFCEGGKSLRVTRDSRGNKADLC PIENIIRFLHEDYFSPLNATNFKEACGSVNPPKTGEF*