BDGP Sequence Production Resources |
Search the DGRC for RH45522
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 455 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15927-RA |
Protein status: | RH45522.pep: gold |
Sequenced Size: | 2276 |
Gene | Date | Evidence |
---|---|---|
CG15927 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15927 | 2005-05-17 | Blastp of sequenced clone |
CG15927 | 2008-04-29 | Release 5.5 accounting |
CG15927 | 2008-08-15 | Release 5.9 accounting |
CG15927 | 2008-12-18 | 5.12 accounting |
2276 bp (2276 high quality bases) assembled on 2005-05-17
GenBank Submission: BT022732
> RH45522.complete GTTAAGCTTTGGAGCACATTGAAAATTTGTAATTCTAGTCAGTTAGCTAT ACGTTTATATCTAAGTCTAATTGTACAGATATCCCTCCTCACATTTACCT ATATACATATATATATACGTATGCATATAAATATTTTTTTTTTTTTGCAA ATTATTTGTTCTAAATTTTAGTGATTAAGCAAAGGTCTACGTCTATGAGA AATAAAAGAAAAGTAAATAAAAAATACAAACATAATGCGGGTCTAATGTG GATATTGATGTTGAATAAAAACAATGTCAATCAAATGGGTTTGTGATTTA GCTACCGTTACGAGCGCTTTCCGGTGATTATCAATTAATACAGTGCGTTT CGAAAGAGTAAGTATTGAGTATTTCAGATGATAATTTCCAAATAAATACA AAAATAGAATTTAAAAGGCTCATTACGAACCCAACACATTATTATAATCT TAAAGTGGACTTTCATTAAGTTCTTCGGTTATGTCACGCACTGTACCGGA CTGTCCATATGCAAATGTGGAACAGTGAGAGTGATCAGCGGTCAACTGCA AATGCCGGCTGGAGTGAAAATTCTGAGCCACGCTTTTCCACATTGCTAAT CTGCATAGAGAGTTTACTGCCTTTATAGTTTGTGGGTTTTTTTTTTTTTT TTGATTGCGGGTGTCTTTTGTCTTAATGCTAATGGGCCGGAGATGTGTGT GTGCTTATGATGGTTGTATTTTGGCTTTTTGTTTGGGCCACTACCAGTGG CAGCGAGAGTGGACGGGTTATGTTTTAATGGCCATTGTAATGGCTCAACT GTCGGCTAGTGAACCAGTGTTAATGTCAATCCACACGAAGGCATTCAAAG AATTATTCTTCTCCACTTTGGCATAAATCAACACAACTCACATACGCTCA CAACTCACTTGATGTTGTTAATAAATGTGTGTTGCTCATAACAAAATAGA GGAAATAATGGAAGAAAGAGCCACTTCAACAGGCCACCAAACAATAAACG TCCAGTCGCGGCCAGTTATGTTTTTATTTTCAATCCAAAGTGTTGGACAT ATCACCACGCACAATGGTGCCAAAGCTATGAACTTCTAATAAATTTTGCT ATTTAACTAACATCTATGCTATATCGTCTTATATATTTAAAATGGCAAAG ACAGTGCATTTTATTTAATTTTTGGTTTTAAATTTGCATATATTTTAACC CACTGTGCATTCGTGTACCGTACGGTATTTTCTCTAATTAATTCGCTTTT ACGAGCGCATTCAGCTGACTTTAGGTTGATTTGAGCCGTGTATTTTTTAG TCCGTTCAGTTGCTGCAACACGGGCCTAGAACGCGCTGCTTTTTCGCTTC ACTCTCGACCGAATAACACATTTTGTTTATTTTTTATTCGAGTGCTTATA TCGAGTGATCCTTGTGTTTATGATGAGCTAACAACCTGCCGGAAAATGCA CATTTTGGCCTATTTAATTCTGAGCCTTTTTGGCCTGGTCGAGAGTTATG GCCATCAGCCGGTACTGAGAAATATCATCAAAGTGCGAGCCAGCGGCTTT ATGCCCTTCGAATCGGATTTACTACTGCCATTGAATATCCTGCGCCAGTT GCAGTCGCACGATCGATCATCGCGTTACATTGGTCAGAGGCCAAAGCCAA TAGTGAGGCCAAAGGTTAAGCAACAAATCAGATTGGAGAGAGCCAATCCT TTGAGGGAGGCCAAAGGTGTTCAGCTCTATAACTTGATCGATGACGATGG TGAACTACTGTTGAATCTCAAGGTTCACAACGAACAGAAGGGAACTGCAC CGGCCAATTATCAAGAGGAGAAATATCAAAGTAGATACCAGAGCTACGAT TCACCATGGATGCCCTCGAAATGGAGACCGACCAGCGAATTTCTGGGTGT GACCTCCTCATCGCCACGCCCACTGCCCCTGCATCAGTATCTGGGCCAAA ACAATAATCGCATCGATCAAAATACGGCGAAAAGGAGGCGGCAGGATATA TGGCCCCACAAATAATAACTAAAATATAATAATATATATAATATATAATA TATAACTCATTTAATTGTTTATTCTTAAACATCACAGCACCCAGAGCACA TTCACATTTATGAACCTGATTTCAAGCAAAATCTCAATGATATTCATTTG AATTTTTTTGAAAATAATCAATGATCCTAAAATATTTGCTAACATTTTAA AACAAATTATATTAAAGCCAAATGATGGAATACTATTTCTAAAAGTTTAT AAGATAATTGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12344400..12346653 | 1..2260 | 10755 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12453424..12455699 | 1..2276 | 11335 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12461522..12463797 | 1..2276 | 11335 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3487..3601 | 163..52 | 151 | 66.9 | Minus |
S2 | 1735 | S2 S2 1735bp | 1427..1659 | 2240..2016 | 128 | 55.7 | Minus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 843..1016 | 2076..2257 | 124 | 58.4 | Plus |
mdg3 | 5519 | mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). | 3255..3359 | 2212..2110 | 114 | 60.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12344400..12346653 | 1..2260 | 95 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..945 | 1316..2260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..570 | 1446..2015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15927-RA | 1..955 | 1306..2260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12453424..12455683 | 1..2260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12453424..12455683 | 1..2260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12453424..12455683 | 1..2260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12347457..12349716 | 1..2260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12461522..12463781 | 1..2260 | 99 | Plus |
Translation from 1445 to 2014
> RH45522.pep MHILAYLILSLFGLVESYGHQPVLRNIIKVRASGFMPFESDLLLPLNILR QLQSHDRSSRYIGQRPKPIVRPKVKQQIRLERANPLREAKGVQLYNLIDD DGELLLNLKVHNEQKGTAPANYQEEKYQSRYQSYDSPWMPSKWRPTSEFL GVTSSSPRPLPLHQYLGQNNNRIDQNTAKRRRQDIWPHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19395-PA | 192 | GF19395-PA | 9..192 | 8..189 | 675 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17720-PA | 190 | GG17720-PA | 1..190 | 1..189 | 882 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17963-PA | 180 | GH17963-PA | 28..167 | 26..169 | 335 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15927-PB | 189 | CG15927-PB | 1..189 | 1..189 | 996 | 100 | Plus |
CG15927-PA | 189 | CG15927-PA | 1..189 | 1..189 | 996 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21642-PA | 216 | GI21642-PA | 39..205 | 22..182 | 403 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25255-PA | 153 | GL25255-PA | 1..153 | 36..189 | 393 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14033-PA | 215 | GA14033-PA | 26..215 | 21..189 | 488 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11563-PA | 190 | GM11563-PA | 1..190 | 1..189 | 929 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16880-PA | 201 | GJ16880-PA | 14..190 | 4..182 | 398 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16494-PA | 223 | GK16494-PA | 3..223 | 1..189 | 393 | 44.7 | Plus |
Dwil\GK18058-PA | 212 | GK18058-PA | 6..212 | 11..189 | 385 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17009-PA | 193 | GE17009-PA | 1..193 | 1..189 | 859 | 88.1 | Plus |
Translation from 1445 to 2014
> RH45522.hyp MHILAYLILSLFGLVESYGHQPVLRNIIKVRASGFMPFESDLLLPLNILR QLQSHDRSSRYIGQRPKPIVRPKVKQQIRLERANPLREAKGVQLYNLIDD DGELLLNLKVHNEQKGTAPANYQEEKYQSRYQSYDSPWMPSKWRPTSEFL GVTSSSPRPLPLHQYLGQNNNRIDQNTAKRRRQDIWPHK*