BDGP Sequence Production Resources |
Search the DGRC for RH46282
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 462 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | fabp-RA |
Protein status: | RH46282.pep: gold |
Sequenced Size: | 1042 |
Gene | Date | Evidence |
---|---|---|
CG31305 | 2002-11-20 | Blastp of sequenced clone |
CG6783 | 2008-04-29 | Release 5.5 accounting |
CG6783 | 2008-08-15 | Release 5.9 accounting |
CG6782 | 2008-08-15 | Release 5.9 accounting |
CG6783 | 2008-12-18 | 5.12 accounting |
CG6782 | 2008-12-18 | 5.12 accounting |
1042 bp (1042 high quality bases) assembled on 2002-11-20
GenBank Submission: BT003449
> RH46282.complete GATTCGCTCAGAAAATTTCAACAGTGAACATCTTGTGCAGAACACAGACC AAATATTCCAAAAATGTCTTTCGTTGGCAAGAAGTACAAGCTGGACAAGT CCGAGAACTTCGATGAGTACATGAAGGAGCTGGTTCTGCCCTCAAACAAC ATATGTATATATGGAATGCTGCACCGAGATAAGGTGGTGCTTTGCCAGAT CTATATTTAAATGCATGGAGGGGCTTGCCAATTGATAAGAGCGGAGATGA GGATGAGGGAGGAGACGACGGCCCGCATTGTTCGTTAACCTTGAGCACGA CTTTTGACGTTACAGCGGAACGGAATCTGCAGGGAACTTCATGGCTCGGC TTTATTATTTTTAATTAAATATGATATGATTTGCATTGTGAGCGCTTTGG GGTCCACAACTTTGTTGGGCTAATTCAATTATGTGCAGTCTGCCCCATCA TTCATCTTTCGGCGTCGGTCTGGTGACGCGCAAGATGGGCAACAGCCTGA GCCCCACAGTGGAGGTGACCTTGGAGGGCGATACCTACACCCTGACTACC ACCTCCACCTTCAAGACCTCTGCCATCAGCTTCAAGCTGGGCGTTGAGTT CGACGAGGAGACCCTGGACGGTCGCAACGTCAAGAGCATCATCACCCTGG ATGGCAACAAGCTGACGCAGGAGCAGAAGGGCGACAAGCCCACCACCATC GTCCGCGAGTTCACCGACAACGAGCTGATCACCACCCTCACCATCGGCAA CGTTAAGTGCGTGCGCGTCTACAAGGCCGTCTAAGAGACTGATCTAAAAC TATAATATCCATACGACTACATGCATTAAAACTAACTCAGATAGCCAATA TTCTTGTTGACTAACAGTGAACTAAACCAAATCAAATGGAACTGCACGCT CTGCCCAATGTTAATTTATAATCGCACCCGTACACCCGCAGTCGGTGTAT GTGGGAATACTCCTCGTACTCGGGGACCAATTTCCGAATGCATTTGAATA AACTATTACTTGAAGTGCTTTTAAAACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6783-RA | 1042 | CG6783-RA | 1..1027 | 2..1028 | 5120 | 99.9 | Plus |
CG6783-RB | 714 | CG6783-RB | 132..699 | 461..1028 | 2840 | 100 | Plus |
CG6783-RC | 1661 | CG6783-RC | 132..404 | 461..733 | 1365 | 100 | Plus |
CG6783-RB | 714 | CG6783-RB | 1..132 | 2..133 | 660 | 100 | Plus |
CG6783-RC | 1661 | CG6783-RC | 1..132 | 2..133 | 660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7390272..7390601 | 462..133 | 1620 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 7389567..7389860 | 1027..734 | 1470 | 100 | Minus |
chr3R | 27901430 | chr3R | 7389929..7390201 | 733..461 | 1365 | 100 | Minus |
chr3R | 27901430 | chr3R | 7392407..7392538 | 133..2 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11564783..11565112 | 462..133 | 1635 | 99.7 | Minus |
3R | 32079331 | 3R | 11564077..11564371 | 1028..734 | 1475 | 100 | Minus |
3R | 32079331 | 3R | 11564440..11564712 | 733..461 | 1365 | 100 | Minus |
3R | 32079331 | 3R | 11566918..11567049 | 133..2 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11305614..11305943 | 462..133 | 1635 | 99.6 | Minus |
3R | 31820162 | 3R | 11304908..11305202 | 1028..734 | 1475 | 100 | Minus |
3R | 31820162 | 3R | 11305271..11305543 | 733..461 | 1365 | 100 | Minus |
3R | 31820162 | 3R | 11307749..11307880 | 133..2 | 660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7389567..7389860 | 734..1027 | 100 | <- | Minus |
chr3R | 7389929..7390200 | 462..733 | 100 | <- | Minus |
chr3R | 7390273..7390600 | 134..461 | 92 | <- | Minus |
chr3R | 7392407..7392538 | 1..133 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6783-RA | 1..354 | 431..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6783-RA | 1..354 | 431..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fabp-RA | 1..354 | 431..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6783-RA | 1..354 | 431..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fabp-RA | 1..354 | 431..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6783-RA | 1..1026 | 2..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6783-RA | 1..1026 | 2..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fabp-RA | 1..1026 | 2..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6783-RA | 1..1026 | 2..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fabp-RA | 5..1031 | 1..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11564078..11564371 | 734..1027 | 100 | <- | Minus |
3R | 11564440..11564711 | 462..733 | 100 | <- | Minus |
3R | 11564784..11565111 | 134..461 | 99 | <- | Minus |
3R | 11566918..11567049 | 1..133 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11564078..11564371 | 734..1027 | 100 | <- | Minus |
3R | 11564440..11564711 | 462..733 | 100 | <- | Minus |
3R | 11564784..11565111 | 134..461 | 99 | <- | Minus |
3R | 11566918..11567049 | 1..133 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11564078..11564371 | 734..1027 | 100 | <- | Minus |
3R | 11564440..11564711 | 462..733 | 100 | <- | Minus |
3R | 11564784..11565111 | 134..461 | 99 | <- | Minus |
3R | 11566918..11567049 | 1..133 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7390162..7390433 | 462..733 | 100 | <- | Minus |
arm_3R | 7389800..7390093 | 734..1027 | 100 | <- | Minus |
arm_3R | 7390506..7390833 | 134..461 | 99 | <- | Minus |
arm_3R | 7392640..7392771 | 1..133 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11304909..11305202 | 734..1027 | 100 | <- | Minus |
3R | 11305271..11305542 | 462..733 | 100 | <- | Minus |
3R | 11305615..11305942 | 134..461 | 99 | <- | Minus |
3R | 11307749..11307880 | 1..133 | 99 | Minus |
Translation from 430 to 783
> RH46282.hyp MCSLPHHSSFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAIS FKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFTDNELI TTLTIGNVKCVRVYKAV*
Translation from 430 to 783
> RH46282.pep MCSLPHHSSFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAIS FKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFTDNELI TTLTIGNVKCVRVYKAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16638-PA | 130 | GF16638-PA | 19..130 | 6..117 | 383 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17215-PA | 130 | GG17215-PA | 19..130 | 6..117 | 529 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15313-PA | 131 | GH15313-PA | 20..131 | 6..117 | 415 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fabp-PA | 117 | CG6783-PA | 1..117 | 1..117 | 595 | 100 | Plus |
fabp-PB | 130 | CG6783-PB | 24..130 | 11..117 | 536 | 100 | Plus |
fabp-PC | 157 | CG6783-PC | 24..116 | 11..103 | 456 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22452-PA | 131 | GI22452-PA | 20..131 | 6..117 | 424 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12263-PA | 131 | GL12263-PA | 20..131 | 6..117 | 384 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26243-PA | 99 | GA26243-PA | 1..99 | 19..117 | 347 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26093-PA | 130 | GM26093-PA | 19..130 | 6..117 | 530 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20655-PA | 117 | GD20655-PA | 1..117 | 1..117 | 510 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10051-PA | 131 | GJ10051-PA | 20..131 | 6..117 | 427 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11787-PA | 131 | GK11787-PA | 20..131 | 6..117 | 426 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10108-PA | 130 | GE10108-PA | 19..130 | 6..117 | 527 | 92.9 | Plus |