BDGP Sequence Production Resources |
Search the DGRC for RH46294
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 462 |
Well: | 94 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14401-RA |
Protein status: | RH46294.pep: gold |
Sequenced Size: | 1256 |
Gene | Date | Evidence |
---|---|---|
CG14401 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14401 | 2004-08-13 | Blastp of sequenced clone |
CG14401 | 2008-04-29 | Release 5.5 accounting |
CG14401 | 2008-08-15 | Release 5.9 accounting |
CG14401 | 2008-12-18 | 5.12 accounting |
1256 bp (1256 high quality bases) assembled on 2004-08-13
GenBank Submission: BT015962
> RH46294.complete GACATTCTGAATGCGATTGTTCGCACGTTCAGTTCAGTTTCTGTTTAGTT CAGTCGCGTGTGTGCATCGCTTCGAGTCGGTGGTCGGTGGTCGGTGGTCG GTGGTCGTTGGTCGGCGGCTTGTGGCTATATAGCGCATCTATCATGTGAT TAAAATCGGTCCGGCAACCGAGAAGACAACATCTGTATTCGCGCACGTAT CGGCATCGCCAAGCTATAGCTATAGCCATACTGACTCACCGCGACCGCCG GACGACAGTGGAATCAACTGTTTTCGGGGGCGGTACGATGGCGATGATGG CAGCGCTTGCCTCGCTCTTTCTGCTCGTCACGCTGGCCAGCTCAGCCCGT GCCATTACCTGCTACGAATGTGATTCCGTCAATAATCCAGGGTGTGGGGA GCGATTTGTGGGCGATGACATATCCACGACGGATTGCGATGTGGTGGCGA ACATGCGATCCCTGGGAGCGGAGGCCACTTGCCTTACCAAGTACCATGAG GGAATGCCAGGAGACACGCGCTTCGTGAGGCGCTCCTGTTACTTTGGCGA TGCCTCCCCAATAGGCGTCAGTTGCGACGATGGACCAGATCCTGTGGTGC CCTTTATGAACTTCCTCGGCTGCACACTGTGCGATACGGATTTGTGCAAC GCAGCCGCTGGATTATCCACACTACCCTTGGTCATTGCCCTTTCGATACT CGGACTGCTTGTCCTACTGGCGACCTAAGGAAGATGAGTCGCGTGGAACG GCGGCGGTCGTATTTCAATGTTTCCTATTAAAAGTAATATACTCCAGTAT TGTATAAAAGATTGTTGTTTTCTTGGTCGACTAACTAACATGACTTCTTA TACTCATGCAAAGGGCGCAGAACAAGAACGACCCAAAGTTTATCCTTATA TTCTTAATTTTCTAAGGCAAATGGCTTAAGTTATAAAAAGCCTACTGAAT ATGTAATAAATTTAACTTAAAGCCCCTAGAAGAATGAAATAGAAGCAAAT ATTTTTTAATTTTTATTTTATTTGATTTTCTTTCCATTGTTTTTATACAT CCACTAAAATGATTTAACATACATATATATTTATATAATTATACTTGTTT GATTTAATATAATTTATTGAATAAAATTTACTCGTTTCCTACTCTACTAG CGTGTGTATGTAAGTATGTGTATGGTGTGTATTGCAATTAGGATCATTAA TTACAAAATATTCATAAAATAAATTAAAATAACACTTTCGAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14401-RA | 1237 | CG14401-RA | 1..1237 | 2..1239 | 6150 | 99.9 | Plus |
CG14401.a | 1231 | CG14401.a | 1..1231 | 2..1239 | 6035 | 99.4 | Plus |
CG14401.b | 1300 | CG14401.b | 566..1300 | 504..1239 | 3640 | 99.8 | Plus |
CG14401.b | 1300 | CG14401.b | 1..344 | 2..345 | 1720 | 100 | Plus |
CG14401.b | 1300 | CG14401.b | 396..554 | 346..504 | 795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20869366..20870099 | 505..1239 | 3580 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 20868382..20868725 | 2..345 | 1720 | 100 | Plus |
chr2L | 23010047 | chr2L | 20869132..20869294 | 342..504 | 815 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20870832..20871565 | 505..1239 | 3625 | 99.9 | Plus |
2L | 23513712 | 2L | 20869848..20870191 | 2..345 | 1720 | 100 | Plus |
2L | 23513712 | 2L | 20870598..20870760 | 342..504 | 815 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20870832..20871565 | 505..1239 | 3635 | 99.8 | Plus |
2L | 23513712 | 2L | 20869848..20870191 | 2..345 | 1720 | 100 | Plus |
2L | 23513712 | 2L | 20870598..20870760 | 342..504 | 815 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 5115..5212 | 1182..1083 | 125 | 62.4 | Minus |
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 4979..5020 | 1194..1235 | 120 | 76.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20869136..20869294 | 346..504 | 100 | -> | Plus |
chr2L | 20869366..20869933 | 505..1072 | 94 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..441 | 288..728 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..441 | 288..728 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..441 | 288..728 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..441 | 288..728 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..441 | 288..728 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..1237 | 2..1239 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..1237 | 2..1239 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..1231 | 8..1239 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..1237 | 2..1239 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14401-RA | 1..1231 | 8..1239 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20869847..20870191 | 1..345 | 99 | -> | Plus |
2L | 20870602..20870760 | 346..504 | 100 | -> | Plus |
2L | 20870832..20871565 | 505..1240 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20869847..20870191 | 1..345 | 99 | -> | Plus |
2L | 20870602..20870760 | 346..504 | 100 | -> | Plus |
2L | 20870832..20871565 | 505..1240 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20869847..20870191 | 1..345 | 99 | -> | Plus |
2L | 20870602..20870760 | 346..504 | 100 | -> | Plus |
2L | 20870832..20871565 | 505..1240 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20869847..20870191 | 1..345 | 99 | -> | Plus |
arm_2L | 20870602..20870760 | 346..504 | 100 | -> | Plus |
arm_2L | 20870832..20871565 | 505..1240 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20869847..20870191 | 1..345 | 99 | -> | Plus |
2L | 20870602..20870760 | 346..504 | 100 | -> | Plus |
2L | 20870832..20871565 | 505..1240 | 99 | Plus |
Translation from 287 to 727
> RH46294.pep MAMMAALASLFLLVTLASSARAITCYECDSVNNPGCGERFVGDDISTTDC DVVANMRSLGAEATCLTKYHEGMPGDTRFVRRSCYFGDASPIGVSCDDGP DPVVPFMNFLGCTLCDTDLCNAAAGLSTLPLVIALSILGLLVLLAT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21008-PA | 145 | GF21008-PA | 17..142 | 18..143 | 436 | 60.3 | Plus |
Dana\GF20975-PA | 148 | GF20975-PA | 13..148 | 12..145 | 216 | 39.3 | Plus |
Dana\GF20986-PA | 148 | GF20986-PA | 11..127 | 10..123 | 197 | 41.7 | Plus |
Dana\GF20997-PA | 152 | GF20997-PA | 1..127 | 3..126 | 142 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21270-PA | 144 | GG21270-PA | 1..132 | 3..134 | 660 | 95.5 | Plus |
Dere\GG21263-PA | 148 | GG21263-PA | 1..148 | 3..145 | 206 | 36.2 | Plus |
Dere\GG21264-PA | 147 | GG21264-PA | 10..147 | 9..145 | 175 | 35.9 | Plus |
Dere\GG21268-PA | 147 | GG21268-PA | 4..147 | 9..145 | 163 | 31.3 | Plus |
Dere\GG10978-PA | 159 | GG10978-PA | 10..139 | 9..129 | 154 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10594-PA | 147 | GH10594-PA | 22..141 | 23..144 | 266 | 45.3 | Plus |
Dgri\GH10592-PA | 148 | GH10592-PA | 13..148 | 12..145 | 210 | 39.3 | Plus |
Dgri\GH10591-PA | 148 | GH10591-PA | 10..148 | 9..145 | 206 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14401-PA | 146 | CG14401-PA | 1..146 | 1..146 | 766 | 100 | Plus |
CG14401-PC | 150 | CG14401-PC | 1..150 | 1..146 | 751 | 97.3 | Plus |
CG14401-PB | 198 | CG14401-PB | 1..198 | 1..146 | 699 | 73.2 | Plus |
CG9336-PA | 148 | CG9336-PA | 4..148 | 2..145 | 214 | 36 | Plus |
CG9338-PB | 147 | CG9338-PB | 8..147 | 7..145 | 187 | 35.4 | Plus |
CG9338-PA | 147 | CG9338-PA | 8..147 | 7..145 | 187 | 35.4 | Plus |
CG9336-PB | 115 | CG9336-PB | 2..115 | 34..145 | 154 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23230-PA | 148 | GI23230-PA | 19..146 | 19..144 | 287 | 44.7 | Plus |
Dmoj\GI23198-PA | 148 | GI23198-PA | 13..139 | 12..135 | 209 | 37.7 | Plus |
Dmoj\GI23209-PA | 148 | GI23209-PA | 23..139 | 22..135 | 197 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18531-PA | 150 | GL18531-PA | 1..150 | 4..146 | 454 | 59.3 | Plus |
Dper\GL18529-PA | 148 | GL18529-PA | 10..148 | 9..145 | 219 | 40.6 | Plus |
Dper\GL25347-PA | 148 | GL25347-PA | 1..148 | 3..145 | 207 | 36.8 | Plus |
Dper\GL18528-PA | 115 | GL18528-PA | 2..115 | 34..145 | 152 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25675-PA | 150 | GA25675-PA | 1..150 | 4..146 | 454 | 59.3 | Plus |
Dpse\GA25674-PA | 148 | GA25674-PA | 10..148 | 9..145 | 219 | 40.6 | Plus |
Dpse\GA21711-PA | 146 | GA21711-PA | 13..146 | 14..145 | 193 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23384-PA | 146 | GM23384-PA | 1..130 | 1..130 | 646 | 95.4 | Plus |
Dsec\GM23380-PA | 148 | GM23380-PA | 13..148 | 12..145 | 206 | 36.4 | Plus |
Dsec\GM23382-PA | 141 | GM23382-PA | 1..141 | 3..145 | 177 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24293-PA | 146 | GD24293-PA | 1..131 | 1..131 | 639 | 93.1 | Plus |
Dsim\GD24290-PA | 148 | GD24290-PA | 13..148 | 12..145 | 206 | 36.4 | Plus |
Dsim\GD24291-PA | 245 | GD24291-PA | 107..245 | 2..145 | 172 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23718-PA | 265 | GJ23718-PA | 140..262 | 23..144 | 257 | 44.5 | Plus |
Dvir\GJ23708-PA | 148 | GJ23708-PA | 23..148 | 22..145 | 211 | 41.5 | Plus |
Dvir\GJ23697-PA | 148 | GJ23697-PA | 13..148 | 12..145 | 208 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15446-PA | 151 | GK15446-PA | 1..136 | 1..128 | 351 | 50.7 | Plus |
Dwil\GK15441-PA | 149 | GK15441-PA | 10..149 | 9..145 | 223 | 38.5 | Plus |
Dwil\GK15443-PA | 148 | GK15443-PA | 10..148 | 9..145 | 201 | 38.5 | Plus |
Dwil\GK15444-PA | 148 | GK15444-PA | 2..148 | 1..145 | 191 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12888-PA | 147 | GE12888-PA | 1..130 | 1..130 | 654 | 95.4 | Plus |
Dyak\GE12885-PA | 148 | GE12885-PA | 13..148 | 12..145 | 201 | 35.7 | Plus |
Dyak\GE12886-PA | 147 | GE12886-PA | 10..147 | 9..145 | 169 | 35.2 | Plus |
Translation from 287 to 727
> RH46294.hyp MAMMAALASLFLLVTLASSARAITCYECDSVNNPGCGERFVGDDISTTDC DVVANMRSLGAEATCLTKYHEGMPGDTRFVRRSCYFGDASPIGVSCDDGP DPVVPFMNFLGCTLCDTDLCNAAAGLSTLPLVIALSILGLLVLLAT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14401-PA | 146 | CG14401-PA | 1..146 | 1..146 | 766 | 100 | Plus |
CG14401-PC | 150 | CG14401-PC | 1..150 | 1..146 | 751 | 97.3 | Plus |
CG14401-PB | 198 | CG14401-PB | 1..198 | 1..146 | 699 | 73.2 | Plus |
CG9336-PA | 148 | CG9336-PA | 4..148 | 2..145 | 214 | 36 | Plus |
CG9338-PB | 147 | CG9338-PB | 8..147 | 7..145 | 187 | 35.4 | Plus |