RH46982.complete Sequence
3927 bp (3927 high quality bases) assembled on 2004-08-13
GenBank Submission: BT015960
> RH46982.complete
GTATGGGTAATGGTTGGGCATTTAGCAAGCAATATACCTAATTTAATTGT
GTTTTTTGTTAAAACAAATTCACCCGCTCGTCGCTACAGAAATGTTGAGT
ATATTTCGGTGTTTTTCATCTCATTACTGTGAGGGTGGCGGTCAGACAAA
TGCCTTTGTTTCAATGTCTGTCCTTAACACAGCATTGGAATGCCGGGAAT
TTCGCCGAAAACGACATTTTTGTCTGGCAGCCAACACGCCCCGAAATATG
CAACATGTCTCCTCGTCCCGCCATCCCTCCCTCCATTCCGTATCCACTTT
TCTTCTTCTGTGGCGGAGGCTCCACCCAAGAGCACGCAATGTGGCAAGGA
CGAGGACATTTCACTATTCAAAAAACATAGTTTCAAAATCGACCAGCGTT
TTAAAGGAGTTTCTTTTCTTTTAGCTAGATATAATATTAAATAAATGTTT
TTAAAGTAAATGATAATGAAAACTGTGTTTTAATTGTTGGTTTATATACT
GTAATTTAATGATATTCCAGTGCACTGCTATTTTAACTTTTAAATGCGTT
CATTCACTAATAAAATTTTACTTATGCCTGACGAGTTTTTCTTCATTGAT
TTTCTAAATTATTTCGCTTTAAATAAATTTTACTTAGTCCCCTTTGCCTG
AAAAGGATTTAAGCTTTAAATAAAGCTTGTGTTATTTCGAAAATACCAAA
TTATCCTTAGAGTGTAGGTCACATACTGGCTGACGCATAAGGCTCGTTTT
GGCTAATGATTGACTGACTGGCTGAATGACGGACGTAGTGACGAACTGAC
TGACTTACGAACGGACTGACTGCCTGGCTGACTGACTGAGGGAATGACTA
ACCAGCGTGTGTGACTTTTCCCAGTTGTGTGTGGGCTTTCGGCGACTTTG
CGTGTAGTTCGTAATTTAAGTAATGTGGGTCGCAGCCTGAAAGCTGAGCC
CTGCGTATCCTTGTTGTTGTTGCTAACGCGATTTACCTTCCAACGAAACA
CGCGCCACGGTTCCGTTACGTTGGCATTAGCTGTTGGCTGTTGGCTATAG
CTATACCGTTACCAGTGCTCTTAGCGTTGGCATATATAGAGAGACCTGCG
GTTATAGCAGCCTTATTGTCATTGAAGGCAACCCACCCAAGACATAAATT
CAATTTCTTTCTGTTCGATGTGACAAGTCGTGAGGAGATCCCCCCTTTTT
CGCCCACTTGCCACCCCCAAAATGCACCGCCATCGCCCCTACACTCCACA
CCCCTCCCCATCGTGTGGTTGTATTTGTTATTATTTTTTGGTAGCCACCT
TTTCGTGTGTTGCTTTCTCGCGATGTCGTCGCCGCCGCCAAGAAAAGGGG
TTCCCATTTTCTCGCCCCTTTTCTTGGTTTCTTTTGCGCTTTCTTGACTT
GCTCTTTTGGCTCGACTGTCGCCGTCTCTGTCACGGAGTCTATTTCCATC
TCTGTCTCTATGCACAGGCTGCACCTTGACACTAATATTGTGCAAAGTAA
AATAAACTTAAAAAAACACAAAAACCAGAAAAAAGGAAAGCAAGTGCAAC
TAAAAATAGTCGGAGACCGCTAAAAGCGAATTGATTGGCGGCTGAGTGTG
TGTGTGTGTGTGAGTGTCTTTTGGGCTCTTTATGCGGACACTTGGCGATT
TTATTGTCAAGTTATAATTGGTAATTGATGCCGATACCCAAACTGATTGT
GTTATGATACACAAAGCTTGCTCAATGGGCTGATTGCCGGGGATTGAAGC
GACTGCAAATGGTTTTTGATTGATTTACCCACGCGGGGTAAGCTGCGATA
ACTTGGGGCTTTATATAAAATAGTGTAGCTCTGCGGCGGCCTTTCCTAAA
CTTAAACTCGGGTCTGCGTGTCTGAAAACTTTTTCCAAATTTAAATAATT
GTCTTGTAATGTGCTAATACTAGGAAACCCTTTCTTTGATTTGTAAAAAT
ATATTTTATATATTTAATTTTTTTGTTTTATATATATTAGATATATATTT
TATTTTATATATTTTAAAATTTGAAAAATACATTTATATGATTTAAAACA
AAAGTGTTCTGAGTATTTACTATATTTTTTGCCATTACAATTTCTATATG
CTGCAAGCTGTGGTCTCTGGTGCGTATACTTAATATCTCGAATAAATGCT
TTTGAGCCGCTTTACTTATATATTTTATATTTAAAACTCAAAATTTCTTT
GAAATATTTTCCTCAAATAAATTGTATTACAAAACCAAGTAAAGTTAAGA
ATTTGAATTGTCGAATTAAGGTTTTTTGAACCGACAATTTAGTTATTTGA
AAAATGTAATTAAATCTAATATTCGGTTCTTATTCCTTGACCTTCAAACG
GTTTTAAATATTTTTTAGTGCATCATAAACTTATTATCGCTTAGCACGCC
AAAATGCACTAAAAGTGTTCAGTTTTCAAGTTCATGCATAAATTAGCAGT
GGTCCGTGGGTGCGTATACTTAATTTTCACCGCCAGTACAATCCTAGTTT
TGAAATCCCAATTCTTTGCATCCTAATTCTCTAGCTTTAATTTTTAATGA
CCACTTTTTTGAAGCCACTCAATCTTGCAACACTTATTGTCGCTTCACAC
GCTCGCTGTGGTTGTTCTTGTTGTTACTGGTGGTGCAGTTGCTACAATTG
TTGTTGTTGTTGTTATTGTTGCGGGCGGTGGTATGGGTTACTATCCCGCA
CCCAACGCGAAGACCGAAAAGAACCCAACACCAGAGCTTTACATAACTCA
CTCGCTCACTCACTCACTGCAAAAAATGGAAACACTTGGGTTGAGCGTTA
AGAATTCAAAACACAAATACACATTTCAATTCGCACATTGCAATTTCCAC
GCGATTTTCAATCATTTTCCAACACATTGGATTAGGCCCTCAATGGGTTG
GCACTTTTGGATATCATTCCGATACCGTTTTCTTGCGAATATCATATATA
TATATATATATATTATATATATATCGAGGGCGGTGTGAAGTCGATATTAC
TACGCTGGCTTATTGTTTGGCCCGTCCGCTTTGGTGACGAGTTTTCTCCG
CTTCCGCAGTGCTGTTGAATTGCAAACCCGACCCGAACTGAGACCTCAAC
TGACCAAGTTTTCCTTTTCATGCAGTTTGGCACGCATTCTCGATTCGGAA
AAGCGGAAAAGCAGGATGACGAAGCGCGGCGAACACCGAAAAGTCTCTGG
TGCGCCGCTTGCTTTTCGATGTCGCCTCCTATTTTCCCGTTCGGAGCCAA
AGCTCACCGCCGGCTCTCTCCGAAGCTCCTTGAATTGGGCAGCTTTCCGA
GTGCCCCAAAGCTTCACAGCTGATTGCCGCCAGTGCATGCGGCATTTCGA
CCCCTCGGCACCGCTGCTCCCCCTATGGCTCCCCGTCATCCTTCGTCCGT
AAAAACAGCTGATGCCCGAGGGTCAGTCTCCGTGTCGATGGAGACGCGGC
GGCTCGGGGGCTCCTTGGTATATGAGAACAAGAGACATCGAACGCGACCT
CAAGGTGCCCAAATTAGGAGACAAGCTCCAGAACATCGCCCAAAAATATA
TGGAAAGGCTTAATGTACACCCCAACAGCCTAGCAAGGAAGCTAGGAACT
GCAGCTGTGGTCAATGCTGACCCTCGGACTAGAGTCAAAAGAAGACTCAA
GCGACACCACCCTCATGACCTCCCTAACCTGGTTTTGACCTAGAAAGTCT
TAGTTTTAAAATTCATTAGAATAATCAAATAAATAATAATTACTATGTTA
TATCAACTATTATAATTCTCCCTATCATTTTTAGGATTAAAAATCTGTTA
GTCTTAAGTAACCAAGACACATTGTTAAATAAAATAATTTAAGCAGATCA
AATTAAGTTGCCGCATGGGTAACAGTGCGTTGATCAAATAATAAAAACAT
CATCGTAATATGGAAAAAAAAAAAAAA
RH46982.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6191-RA | 3636 | CG6191-RA | 3380..3633 | 3655..3908 | 1255 | 99.6 | Plus |
| ctp.b | 4192 | ctp.b | 2616..2889 | 3927..3654 | 1250 | 97 | Minus |
| nc_12806.a | 219 | nc_12806.a | 1..95 | 3198..3104 | 475 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:06:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3L | 24539361 | chr3L | 15885675..15889585 | 1..3913 | 19395 | 99.8 | Plus |
| chr3L | 24539361 | chr3L | 11323276..11323732 | 3454..3910 | 2270 | 99.8 | Plus |
| chr4 | 1351717 | chr4 | 435396..435852 | 3910..3454 | 2270 | 99.8 | Minus |
| chr3L | 24539361 | chr3L | 12865369..12865824 | 3909..3454 | 2265 | 99.8 | Minus |
| chrX | 22417052 | chrX | 9400892..9401347 | 3454..3909 | 2265 | 99.8 | Plus |
| chr3LHet | 2555433 | chr3LHet | 57185..57640 | 3909..3454 | 2265 | 99.8 | Minus |
| chrX | 22417052 | chrX | 7372789..7373243 | 3908..3454 | 2260 | 99.8 | Minus |
| chrX | 22417052 | chrX | 20951375..20951829 | 3908..3454 | 2260 | 99.8 | Minus |
| chr2R | 21145070 | chr2R | 15666658..15667112 | 3454..3908 | 2260 | 99.8 | Plus |
| chr2L | 23010047 | chr2L | 4917341..4917795 | 3908..3454 | 2260 | 99.8 | Minus |
| chr3L | 24539361 | chr3L | 939647..940103 | 3910..3454 | 2255 | 99.6 | Minus |
| chr2R | 21145070 | chr2R | 18412380..18412836 | 3910..3454 | 2255 | 99.6 | Minus |
| chr2L | 23010047 | chr2L | 9392502..9392958 | 3910..3454 | 2255 | 99.6 | Minus |
| chr2L | 23010047 | chr2L | 13480194..13480650 | 3910..3454 | 2255 | 99.6 | Minus |
| chr3R | 27901430 | chr3R | 9342414..9342870 | 3910..3454 | 2255 | 99.6 | Minus |
| chrX | 22417052 | chrX | 21965576..21966031 | 3454..3909 | 2250 | 99.6 | Plus |
| chr2R | 21145070 | chr2R | 18236331..18236786 | 3909..3454 | 2250 | 99.6 | Minus |
| chr2R | 21145070 | chr2R | 8711338..8711792 | 3454..3908 | 2245 | 99.6 | Plus |
| chr2R | 21145070 | chr2R | 14245559..14246010 | 3905..3454 | 2245 | 99.8 | Minus |
| chr2L | 23010047 | chr2L | 20890164..20890618 | 3908..3454 | 2245 | 99.6 | Minus |
| chr3R | 27901430 | chr3R | 2340374..2340825 | 3454..3905 | 2245 | 99.8 | Plus |
| chr3R | 27901430 | chr3R | 24620475..24620929 | 3454..3908 | 2245 | 99.6 | Plus |
| chr3R | 27901430 | chr3R | 25230077..25230531 | 3454..3908 | 2245 | 99.6 | Plus |
| chrX | 22417052 | chrX | 1416586..1417036 | 3454..3904 | 2240 | 99.8 | Plus |
| chrX | 22417052 | chrX | 5231364..5231814 | 3904..3454 | 2240 | 99.8 | Minus |
| chr2L | 23010047 | chr2L | 52070..52520 | 3454..3904 | 2240 | 99.8 | Plus |
| chr2L | 23010047 | chr2L | 19619121..19619577 | 3454..3910 | 2240 | 99.3 | Plus |
| chr2R | 21145070 | chr2R | 13034491..13034940 | 3903..3454 | 2235 | 99.8 | Minus |
| chr3L | 24539361 | chr3L | 9211249..9211703 | 3908..3454 | 2230 | 99.3 | Minus |
| chrX | 22417052 | chrX | 4624726..4625180 | 3908..3454 | 2230 | 99.3 | Minus |
| chrX | 22417052 | chrX | 19360975..19361429 | 3908..3454 | 2230 | 99.3 | Minus |
| chr3R | 27901430 | chr3R | 10072271..10072721 | 3454..3904 | 2225 | 99.6 | Plus |
| chrU | 10048995 | chrU | 6623545..6624002 | 3454..3910 | 2225 | 99.6 | Plus |
| chr4 | 1351717 | chr4 | 434610..435059 | 3903..3454 | 2220 | 99.6 | Minus |
| chrX | 22417052 | chrX | 13320928..13321377 | 3454..3903 | 2220 | 99.6 | Plus |
| chr2R | 21145070 | chr2R | 6907500..6907949 | 3903..3454 | 2220 | 99.6 | Minus |
| chr3L | 24539361 | chr3L | 9567817..9568265 | 3902..3454 | 2215 | 99.6 | Minus |
| chr2R | 21145070 | chr2R | 3127792..3128240 | 3454..3902 | 2200 | 99.3 | Plus |
| chrU | 10048995 | chrU | 9563904..9564360 | 3454..3910 | 2165 | 98.2 | Plus |
| chr3L | 24539361 | chr3L | 16483803..16484234 | 3910..3479 | 2130 | 99.5 | Minus |
| chr3L | 24539361 | chr3L | 5994399..5994783 | 3903..3519 | 1910 | 99.7 | Minus |
| chrU | 10048995 | chrU | 9551244..9551628 | 3909..3525 | 1910 | 99.7 | Minus |
| chr3L | 24539361 | chr3L | 3474527..3474871 | 3564..3908 | 1710 | 99.7 | Plus |
| chrX | 22417052 | chrX | 8814065..8814409 | 3565..3909 | 1710 | 99.7 | Plus |
| chrX | 22417052 | chrX | 16825646..16825993 | 3564..3911 | 1710 | 99.4 | Plus |
| chr2R | 21145070 | chr2R | 18246985..18247327 | 3566..3908 | 1700 | 99.7 | Plus |
| chr3R | 27901430 | chr3R | 24078421..24078761 | 3568..3908 | 1690 | 99.7 | Plus |
| chr3R | 27901430 | chr3R | 24125123..24125466 | 3908..3565 | 1690 | 99.4 | Minus |
| chr2L | 23010047 | chr2L | 14888784..14889122 | 3904..3566 | 1680 | 99.7 | Minus |
| chr3R | 27901430 | chr3R | 26303066..26303404 | 3903..3565 | 1680 | 99.7 | Minus |
| chr2R | 21145070 | chr2R | 18661544..18661880 | 3568..3904 | 1670 | 99.7 | Plus |
| chrX | 22417052 | chrX | 4685223..4685561 | 3908..3570 | 1665 | 99.4 | Minus |
| chr2R | 21145070 | chr2R | 13164293..13164640 | 3560..3907 | 1665 | 98.6 | Plus |
| chr3R | 27901430 | chr3R | 19895540..19895885 | 3908..3564 | 1650 | 99.1 | Minus |
| chrU | 10048995 | chrU | 8001430..8001764 | 3903..3569 | 1645 | 99.4 | Minus |
| chr3R | 27901430 | chr3R | 5145356..5145695 | 3564..3902 | 1620 | 99.1 | Plus |
| chrX | 22417052 | chrX | 7594892..7595233 | 3564..3908 | 1570 | 97.7 | Plus |
| chr3L | 24539361 | chr3L | 21743099..21743405 | 3876..3570 | 1520 | 99.7 | Minus |
| chr3R | 27901430 | chr3R | 22465864..22466168 | 3608..3912 | 1495 | 99.3 | Plus |
| chr2L | 23010047 | chr2L | 14617611..14617960 | 3904..3536 | 1480 | 94 | Minus |
| chr3L | 24539361 | chr3L | 18998493..18998749 | 3654..3910 | 1270 | 99.6 | Plus |
| chr3L | 24539361 | chr3L | 5530399..5530654 | 3909..3654 | 1265 | 99.6 | Minus |
| chrX | 22417052 | chrX | 17320824..17321079 | 3910..3655 | 1265 | 99.6 | Minus |
| chr2R | 21145070 | chr2R | 13932861..13933116 | 3655..3910 | 1265 | 99.6 | Plus |
| chr2L | 23010047 | chr2L | 1618182..1618436 | 3909..3655 | 1260 | 99.6 | Minus |
| chr2R | 21145070 | chr2R | 9467890..9468143 | 3908..3655 | 1255 | 99.6 | Minus |
| chr3R | 27901430 | chr3R | 25142634..25142887 | 3656..3909 | 1255 | 99.6 | Plus |
| chrX | 22417052 | chrX | 1417055..1417305 | 3904..3654 | 1240 | 99.6 | Minus |
| chr3L | 24539361 | chr3L | 9563851..9564103 | 3908..3656 | 1235 | 99.2 | Minus |
| chrX | 22417052 | chrX | 13292321..13292570 | 3655..3904 | 1235 | 99.6 | Plus |
| chrX | 22417052 | chrX | 4593269..4593520 | 3905..3654 | 1230 | 99.2 | Minus |
| chr3R | 27901430 | chr3R | 25475733..25475982 | 3904..3655 | 1220 | 99.2 | Minus |
| chr2R | 21145070 | chr2R | 10892077..10892314 | 3908..3672 | 1125 | 99.2 | Minus |
| chrX | 22417052 | chrX | 7676251..7676464 | 3897..3684 | 1055 | 99.5 | Minus |
| chr3R | 27901430 | chr3R | 4533436..4533600 | 3904..3740 | 810 | 99.4 | Minus |
| chr4 | 1351717 | chr4 | 732158..732335 | 3674..3488 | 270 | 77.5 | Minus |
| chr2RHet | 3288813 | chr2RHet | 1879746..1879866 | 3460..3581 | 245 | 82 | Plus |
| chr3L | 24539361 | chr3L | 21738335..21738378 | 3909..3866 | 220 | 100 | Minus |
| chr3LHet | 2555433 | chr3LHet | 2267568..2267638 | 3646..3576 | 190 | 84.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:30:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15895832..15899758 | 1..3927 | 19590 | 99.9 | Plus |
| 3L | 28110227 | 3L | 11332411..11332884 | 3454..3927 | 2310 | 99.2 | Plus |
| 3L | 28110227 | 3L | 12875001..12875474 | 3927..3454 | 2295 | 98.9 | Minus |
| Y | 3667352 | Y | 718543..719016 | 3927..3454 | 2295 | 98.9 | Minus |
| X | 23542271 | X | 7480839..7481312 | 3927..3454 | 2295 | 98.9 | Minus |
| X | 23542271 | X | 9509160..9509633 | 3454..3927 | 2295 | 98.9 | Plus |
| X | 23542271 | X | 21086199..21086672 | 3927..3454 | 2295 | 98.9 | Minus |
| 4 | 1348131 | 4 | 414823..415296 | 3927..3454 | 2295 | 98.9 | Minus |
| 2R | 25286936 | 2R | 19779430..19779903 | 3454..3927 | 2295 | 98.9 | Plus |
| 2R | 25286936 | 2R | 18358455..18358928 | 3927..3454 | 2280 | 98.7 | Minus |
| 2R | 25286936 | 2R | 22349753..22350226 | 3927..3454 | 2280 | 98.7 | Minus |
| 3R | 32079331 | 3R | 28797472..28797945 | 3454..3927 | 2280 | 98.7 | Plus |
| 2L | 23513712 | 2L | 19620601..19621074 | 3454..3927 | 2280 | 98.7 | Plus |
| 2L | 23513712 | 2L | 20891610..20892083 | 3927..3454 | 2280 | 98.7 | Minus |
| 2R | 25286936 | 2R | 22525815..22526290 | 3927..3454 | 2270 | 98.9 | Minus |
| 3L | 28110227 | 3L | 9219326..9219799 | 3927..3454 | 2265 | 98.5 | Minus |
| X | 23542271 | X | 4731877..4732350 | 3927..3454 | 2265 | 98.5 | Minus |
| X | 23542271 | X | 22569610..22570083 | 3454..3927 | 2265 | 98.5 | Plus |
| 3R | 32079331 | 3R | 13517292..13517765 | 3927..3454 | 2265 | 98.5 | Minus |
| X | 23542271 | X | 5338781..5339251 | 3927..3454 | 2260 | 98.9 | Minus |
| 2L | 23513712 | 2L | 4918228..4918682 | 3908..3454 | 2260 | 99.8 | Minus |
| 3L | 28110227 | 3L | 939831..940287 | 3910..3454 | 2255 | 99.6 | Minus |
| 2L | 23513712 | 2L | 9393565..9394021 | 3910..3454 | 2255 | 99.6 | Minus |
| 2L | 23513712 | 2L | 13481510..13481966 | 3910..3454 | 2255 | 99.6 | Minus |
| Ymm | 880023 | Ymm | 831607..832078 | 3454..3924 | 2250 | 98.9 | Plus |
| 2R | 25286936 | 2R | 12824052..12824506 | 3454..3908 | 2245 | 99.6 | Plus |
| 3R | 32079331 | 3R | 6514633..6515084 | 3454..3905 | 2245 | 99.8 | Plus |
| 3R | 32079331 | 3R | 29407414..29407868 | 3454..3908 | 2245 | 99.6 | Plus |
| X | 23542271 | X | 1522715..1523165 | 3454..3904 | 2240 | 99.8 | Plus |
| 2L | 23513712 | 2L | 52070..52520 | 3454..3904 | 2240 | 99.8 | Plus |
| 4 | 1348131 | 4 | 414030..414503 | 3927..3454 | 2235 | 98.1 | Minus |
| 2R | 25286936 | 2R | 11019943..11020416 | 3927..3454 | 2235 | 98.1 | Minus |
| 2R | 25286936 | 2R | 17147318..17147767 | 3903..3454 | 2235 | 99.8 | Minus |
| X | 23542271 | X | 19472192..19472646 | 3908..3454 | 2230 | 99.3 | Minus |
| 3R | 32079331 | 3R | 14247400..14247850 | 3454..3904 | 2225 | 99.6 | Plus |
| X | 23542271 | X | 13430119..13430568 | 3454..3903 | 2220 | 99.6 | Plus |
| 3L | 28110227 | 3L | 9575985..9576433 | 3902..3454 | 2215 | 99.6 | Minus |
| 2R | 25286936 | 2R | 7240426..7240899 | 3454..3927 | 2205 | 97.7 | Plus |
| U | 3151297 | U | 2156111..2156584 | 3454..3927 | 2205 | 97.7 | Plus |
| 3L | 28110227 | 3L | 16494039..16494489 | 3926..3476 | 2150 | 98.4 | Minus |
| 3L | 28110227 | 3L | 6001785..6002169 | 3903..3519 | 1910 | 99.7 | Minus |
| 3L | 28110227 | 3L | 3475135..3475498 | 3564..3927 | 1745 | 98.6 | Plus |
| X | 23542271 | X | 8922385..8922747 | 3565..3927 | 1740 | 98.6 | Plus |
| 3R | 32079331 | 3R | 28255475..28255834 | 3568..3927 | 1725 | 98.6 | Plus |
| 3R | 32079331 | 3R | 28302172..28302534 | 3927..3565 | 1725 | 98.3 | Minus |
| 2R | 25286936 | 2R | 22360441..22360802 | 3566..3927 | 1720 | 98.3 | Plus |
| 2L | 23513712 | 2L | 14890012..14890375 | 3927..3564 | 1715 | 98.1 | Minus |
| X | 23542271 | X | 16936064..16936411 | 3564..3911 | 1710 | 99.4 | Plus |
| X | 23542271 | X | 4792444..4792801 | 3927..3570 | 1700 | 98.3 | Minus |
| 3R | 32079331 | 3R | 24072157..24072520 | 3927..3564 | 1695 | 98.9 | Minus |
| 3R | 32079331 | 3R | 30480534..30480894 | 3925..3565 | 1685 | 97.8 | Minus |
| 2R | 25286936 | 2R | 22775024..22775360 | 3568..3904 | 1670 | 99.7 | Plus |
| 2R | 25286936 | 2R | 17277272..17277619 | 3560..3907 | 1665 | 98.6 | Plus |
| 3R | 32079331 | 3R | 9319631..9319969 | 3564..3902 | 1665 | 99.4 | Plus |
| X | 23542271 | X | 7702962..7703322 | 3564..3927 | 1605 | 96.7 | Plus |
| 3R | 32079331 | 3R | 26642789..26643108 | 3608..3927 | 1555 | 99.1 | Plus |
| 3L | 28110227 | 3L | 21754164..21754470 | 3876..3570 | 1520 | 99.7 | Minus |
| 2L | 23513712 | 2L | 14618926..14619298 | 3927..3536 | 1520 | 93.1 | Minus |
| 2R | 25286936 | 2R | 18045728..18046000 | 3655..3927 | 1320 | 98.9 | Plus |
| 3L | 28110227 | 3L | 19008900..19009173 | 3654..3927 | 1310 | 98.5 | Plus |
| X | 23542271 | X | 17431417..17431689 | 3927..3655 | 1305 | 98.5 | Minus |
| 2R | 25286936 | 2R | 13580570..13580842 | 3927..3655 | 1305 | 98.5 | Minus |
| 3L | 28110227 | 3L | 9571974..9572245 | 3927..3656 | 1270 | 97.8 | Minus |
| 3L | 28110227 | 3L | 5537803..5538058 | 3909..3654 | 1265 | 99.6 | Minus |
| 2L | 23513712 | 2L | 1618303..1618557 | 3909..3655 | 1260 | 99.6 | Minus |
| 3R | 32079331 | 3R | 29319885..29320138 | 3656..3909 | 1255 | 99.6 | Plus |
| X | 23542271 | X | 4700459..4700732 | 3927..3654 | 1250 | 97.1 | Minus |
| X | 23542271 | X | 13401544..13401816 | 3655..3927 | 1245 | 97.1 | Plus |
| X | 23542271 | X | 1523184..1523434 | 3904..3654 | 1240 | 99.6 | Minus |
| 3R | 32079331 | 3R | 29653138..29653387 | 3904..3655 | 1220 | 99.2 | Minus |
| 2R | 25286936 | 2R | 15004793..15005049 | 3927..3672 | 1160 | 97.7 | Minus |
| X | 23542271 | X | 7784319..7784532 | 3897..3684 | 1055 | 99.5 | Minus |
| 3R | 32079331 | 3R | 8707460..8707624 | 3904..3740 | 810 | 99.4 | Minus |
| 4 | 1348131 | 4 | 711593..711770 | 3674..3488 | 270 | 77.5 | Minus |
| 3L | 28110227 | 3L | 21749382..21749443 | 3927..3866 | 250 | 93.5 | Minus |
| 2R | 25286936 | 2R | 3096608..3096728 | 3460..3581 | 245 | 82 | Plus |
| 3L | 28110227 | 3L | 27160243..27160313 | 3646..3576 | 190 | 84.5 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:46:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28103327 | 3L | 15888932..15892858 | 1..3927 | 19590 | 99.9 | Plus |
| 3L | 28103327 | 3L | 11325511..11325984 | 3454..3927 | 2310 | 99.1 | Plus |
| 3L | 28103327 | 3L | 12868101..12868574 | 3927..3454 | 2295 | 98.9 | Minus |
| X | 23527363 | X | 9517258..9517731 | 3454..3927 | 2295 | 98.9 | Plus |
| X | 23527363 | X | 21071291..21071764 | 3927..3454 | 2295 | 98.9 | Minus |
| X | 23527363 | X | 7488937..7489410 | 3927..3454 | 2295 | 98.9 | Minus |
| 2R | 25260384 | 2R | 19780629..19781102 | 3454..3927 | 2295 | 98.9 | Plus |
| 4 | 1331231 | 4 | 414823..415296 | 3927..3454 | 2295 | 98.9 | Minus |
| Y | 3410481 | Y | 993690..994163 | 3927..3454 | 2295 | 98.9 | Minus |
| 2R | 25260384 | 2R | 22350952..22351425 | 3927..3454 | 2280 | 98.7 | Minus |
| 2R | 25260384 | 2R | 18359654..18360127 | 3927..3454 | 2280 | 98.7 | Minus |
| 2R | 25260384 | 2R | 22527014..22527489 | 3927..3454 | 2280 | 98.9 | Minus |
| 3R | 31820162 | 3R | 28538303..28538776 | 3454..3927 | 2280 | 98.7 | Plus |
| 2L | 23513712 | 2L | 19620601..19621074 | 3454..3927 | 2280 | 98.7 | Plus |
| 2L | 23513712 | 2L | 20891610..20892083 | 3927..3454 | 2280 | 98.7 | Minus |
| X | 23527363 | X | 5346879..5347349 | 3927..3454 | 2270 | 98.9 | Minus |
| 3L | 28103327 | 3L | 9212426..9212899 | 3927..3454 | 2265 | 98.5 | Minus |
| X | 23527363 | X | 22554702..22555175 | 3454..3927 | 2265 | 98.5 | Plus |
| X | 23527363 | X | 4739975..4740448 | 3927..3454 | 2265 | 98.5 | Minus |
| 3R | 31820162 | 3R | 13258123..13258596 | 3927..3454 | 2265 | 98.5 | Minus |
| 2L | 23513712 | 2L | 4918228..4918682 | 3908..3454 | 2260 | 99.7 | Minus |
| 3L | 28103327 | 3L | 939831..940287 | 3910..3454 | 2255 | 99.5 | Minus |
| 2L | 23513712 | 2L | 13481510..13481966 | 3910..3454 | 2255 | 99.5 | Minus |
| 2L | 23513712 | 2L | 9393565..9394021 | 3910..3454 | 2255 | 99.5 | Minus |
| 2R | 25260384 | 2R | 12825251..12825705 | 3454..3908 | 2245 | 99.5 | Plus |
| 3R | 31820162 | 3R | 6255464..6255915 | 3454..3905 | 2245 | 99.7 | Plus |
| 3R | 31820162 | 3R | 29148245..29148699 | 3454..3908 | 2245 | 99.5 | Plus |
| X | 23527363 | X | 1530813..1531263 | 3454..3904 | 2240 | 99.7 | Plus |
| 2L | 23513712 | 2L | 52070..52520 | 3454..3904 | 2240 | 99.7 | Plus |
| 2R | 25260384 | 2R | 17148517..17148966 | 3903..3454 | 2235 | 99.7 | Minus |
| 2R | 25260384 | 2R | 11021142..11021615 | 3927..3454 | 2235 | 98.1 | Minus |
| 4 | 1331231 | 4 | 414030..414503 | 3927..3454 | 2235 | 98.1 | Minus |
| X | 23527363 | X | 19480290..19480744 | 3908..3454 | 2230 | 99.3 | Minus |
| 3R | 31820162 | 3R | 13988231..13988681 | 3454..3904 | 2225 | 99.5 | Plus |
| X | 23527363 | X | 13438217..13438666 | 3454..3903 | 2220 | 99.5 | Plus |
| 3L | 28103327 | 3L | 9569085..9569533 | 3902..3454 | 2215 | 99.5 | Minus |
| 2R | 25260384 | 2R | 7241625..7242073 | 3454..3902 | 2200 | 99.3 | Plus |
| 3L | 28103327 | 3L | 16487139..16487589 | 3926..3476 | 2150 | 98.4 | Minus |
| Unmapped_scaffold_56 | 21045 | Unmapped_scaffold_56 | 1503..1955 | 3904..3454 | 2110 | 98.4 | Minus |
| 3L | 28103327 | 3L | 5994885..5995269 | 3903..3519 | 1910 | 99.7 | Minus |
| 3L | 28103327 | 3L | 3475135..3475498 | 3564..3927 | 1745 | 98.6 | Plus |
| X | 23527363 | X | 8930483..8930843 | 3565..3927 | 1745 | 99.1 | Plus |
| 3R | 31820162 | 3R | 27996306..27996665 | 3568..3927 | 1725 | 98.6 | Plus |
| 3R | 31820162 | 3R | 28043003..28043365 | 3927..3565 | 1725 | 98.3 | Minus |
| 2R | 25260384 | 2R | 22361640..22362001 | 3566..3927 | 1720 | 98.3 | Plus |
| 3R | 31820162 | 3R | 23812988..23813351 | 3927..3564 | 1715 | 98.9 | Minus |
| 2L | 23513712 | 2L | 14890012..14890375 | 3927..3564 | 1715 | 98 | Minus |
| X | 23527363 | X | 16944162..16944509 | 3564..3911 | 1710 | 99.4 | Plus |
| X | 23527363 | X | 4800542..4800899 | 3927..3570 | 1700 | 98.3 | Minus |
| 3R | 31820162 | 3R | 30221365..30221725 | 3925..3565 | 1685 | 97.7 | Minus |
| 2R | 25260384 | 2R | 22776223..22776559 | 3568..3904 | 1670 | 99.7 | Plus |
| 2R | 25260384 | 2R | 17278471..17278818 | 3560..3907 | 1665 | 98.5 | Plus |
| 3R | 31820162 | 3R | 9060462..9060800 | 3564..3902 | 1665 | 99.4 | Plus |
| X | 23527363 | X | 7711060..7711420 | 3564..3927 | 1615 | 96.7 | Plus |
| 3R | 31820162 | 3R | 26383620..26383939 | 3608..3927 | 1555 | 99 | Plus |
| 3L | 28103327 | 3L | 21747264..21747570 | 3876..3570 | 1520 | 99.6 | Minus |
| 2R | 25260384 | 2R | 18046927..18047199 | 3655..3927 | 1320 | 98.9 | Plus |
| 3L | 28103327 | 3L | 19002000..19002273 | 3654..3927 | 1310 | 98.5 | Plus |
| X | 23527363 | X | 17439515..17439787 | 3927..3655 | 1305 | 98.5 | Minus |
| 2R | 25260384 | 2R | 13581769..13582041 | 3927..3655 | 1305 | 98.5 | Minus |
| 3L | 28103327 | 3L | 9565074..9565345 | 3927..3656 | 1270 | 97.7 | Minus |
| 3L | 28103327 | 3L | 5530903..5531158 | 3909..3654 | 1265 | 99.6 | Minus |
| 2L | 23513712 | 2L | 1618303..1618557 | 3909..3655 | 1260 | 99.6 | Minus |
| X | 23527363 | X | 13409642..13409915 | 3655..3927 | 1255 | 97.8 | Plus |
| 3R | 31820162 | 3R | 29060716..29060969 | 3656..3909 | 1255 | 99.6 | Plus |
| X | 23527363 | X | 4708557..4708830 | 3927..3654 | 1250 | 97 | Minus |
| X | 23527363 | X | 1531282..1531532 | 3904..3654 | 1240 | 99.6 | Minus |
| Unmapped_scaffold_56 | 21045 | Unmapped_scaffold_56 | 1234..1484 | 3654..3904 | 1240 | 99.6 | Plus |
| 3R | 31820162 | 3R | 29393969..29394218 | 3904..3655 | 1220 | 99.2 | Minus |
| 2R | 25260384 | 2R | 15005992..15006248 | 3927..3672 | 1170 | 97.6 | Minus |
| X | 23527363 | X | 7792417..7792630 | 3897..3684 | 1055 | 99.5 | Minus |
| 2L | 23513712 | 2L | 14619111..14619298 | 3723..3536 | 940 | 100 | Minus |
| 2L | 23513712 | 2L | 14618926..14619112 | 3927..3741 | 815 | 95.7 | Minus |
| 3R | 31820162 | 3R | 8448291..8448455 | 3904..3740 | 810 | 99.3 | Minus |
| 4 | 1331231 | 4 | 711677..711770 | 3581..3488 | 260 | 85.1 | Minus |
| 2R | 25260384 | 2R | 3096608..3096728 | 3460..3581 | 255 | 81.9 | Plus |
| 3L | 28103327 | 3L | 21742482..21742543 | 3927..3866 | 250 | 93.5 | Minus |
| 4 | 1331231 | 4 | 711593..711656 | 3674..3611 | 170 | 84.3 | Minus |
Blast to na_te.dros performed 2019-03-16 05:05:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jockey | 5020 | jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). | 4559..5007 | 3454..3903 | 2220 | 99.6 | Plus |
| jockey2 | 3428 | jockey2 JOCKEY2 3428bp | 2990..3329 | 3453..3800 | 506 | 62.9 | Plus |
| Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1049..1161 | 3842..3720 | 132 | 62.9 | Minus |
| S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 1428..1505 | 3733..3809 | 126 | 64.1 | Plus |
| accord2 | 7650 | accord2 QBERT 7650bp | 5852..5948 | 410..511 | 120 | 60.8 | Plus |
RH46982.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:06:50 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3L | 15885675..15886430 | 1..756 | 99 | == | Plus |
| chr3L | 15886514..15887089 | 840..1415 | 99 | == | Plus |
| chr3L | 15887141..15887617 | 1467..1943 | 100 | == | Plus |
| chr3L | 15887723..15888280 | 2049..2606 | 95 | == | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:16:15 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scarface-RA | 1120..1138 | 3289..3307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-10 19:37:37 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 16:32:25 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 08:06:12 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:33:17 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6191-RA | 160..171 | 2834..2845 | 100 | == | Plus |
| CG6191-RA | 3180..3436 | 3655..3913 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 05:57:10 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:06:50 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15895832..15899744 | 1..3913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:06:50 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15895832..15899744 | 1..3913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:06:50 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15895832..15899744 | 1..3913 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:12 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15888932..15892844 | 1..3913 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:12 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15888932..15892844 | 1..3913 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:53:13 Download gff for
RH46982.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15888932..15892844 | 1..3913 | 99 | | Plus |
RH46982.pep Sequence
Translation from 91 to 423
> RH46982.pep
MLSIFRCFSSHYCEGGGQTNAFVSMSVLNTALECREFRRKRHFCLAANTP
RNMQHVSSSRHPSLHSVSTFLLLWRRLHPRARNVARTRTFHYSKNIVSKS
TSVLKEFLFF*
RH46982.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:07:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG16653-PA | 123 | GG16653-PA | 1..62 | 1..62 | 304 | 93.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:07:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM19400-PA | 124 | GM19400-PA | 1..108 | 1..108 | 392 | 75.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:07:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD17951-PA | 123 | GD17951-PA | 1..107 | 1..108 | 339 | 67.6 | Plus |
RH46982.hyp Sequence
Translation from 91 to 423
> RH46982.hyp
MLSIFRCFSSHYCEGGGQTNAFVSMSVLNTALECREFRRKRHFCLAANTP
RNMQHVSSSRHPSLHSVSTFLLLWRRLHPRARNVARTRTFHYSKNIVSKS
TSVLKEFLFF*
Sequence RH46982.hyp has no blast hits.
