BDGP Sequence Production Resources |
Search the DGRC for RH48586
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 485 |
Well: | 86 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Tango14-RA |
Protein status: | RH48586.pep: gold |
Preliminary Size: | 992 |
Sequenced Size: | 1271 |
Gene | Date | Evidence |
---|---|---|
CG4775 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4775 | 2002-02-27 | Blastp of sequenced clone |
CG4775 | 2003-01-01 | Sim4 clustering to Release 3 |
Tango14 | 2008-04-29 | Release 5.5 accounting |
Tango14 | 2008-08-15 | Release 5.9 accounting |
Tango14 | 2008-12-18 | 5.12 accounting |
1271 bp (1271 high quality bases) assembled on 2002-02-27
GenBank Submission: AY089679
> RH48586.complete GACACTGACGAACACGTATTTTCATTATTCTTGCGAAGCGCATCGCTTAA AACTTGATTACGCTCGGATAACAAGATGCACCCGCGTCTCAAGTGACTGA ACAGGTAGCGAAGTGACCCTGGATGAGCGTGGGTAGGCAGCCGGCACCTC TGGAAAGCCCTAATCCCAGGTCCGCCAGCCGTTTGCAGGTTATGTCCGCT TGTGTACACTGTGACGGGGAACCGAAGAAGCAACAGGAGCGGATTCCTGG CAGAAGAGACAACCGCTGTACGAGATACCGCCCCTGACCTGCGCAACATG ATCGAGGTGCTGTGCCTGCTGCTGGGCAGGATCCTGCTGCTCCTGGTCGG CGGCTACGAACTGATGTGGCGGCTCCGAGAGCGACTGAATGCACTGGCCG TCCGGTCATATGACCTTTGGCGCAGCAAAGCGGCACGTGAGGCGCACGAG CGGCGCGTGCTCGCTGACTGCCGCTCCCAGTTGACGAAGACGCCGCAGCA TCTGGTCCTGGTTATCTCCCCCGTAGATGCCGGCGTGGATGCGGTGCTCC TCAGCAGGATCTTCGACTTTGCCCTGGACGTGGGCATCAAACACGTCAGC CTGTACGACAGGCGGACGAAAGGCAGGGGATACGTGGACATGGCCGATCT CTGTCGATCCACCAACGCGGACACGGGCAGCTGCTTAAAGTGGCCACCCG TAGCCAGTCCCAGCAAACTGGAGAACCAGCCCAAAAACGGACAAAAGACA AATGGTTATGTGAACGGTTCACATTCCCCTCAACTGCAGCTCCATCAAAT CAGCGCCTCCGACGGCCATGCCCTGATCGCCGACGTCTGCCGCGAGTTGT ACGAAGACAGTAAGACGGAGTTGGTGCAGAGCCTACTTAAGCAGAAGCGC GAAGCGCTGACGGAGCAGATCAGCGACATGCTGAGCAAGCGACTCGGGTT CGAGGCCCCGGAGCCGGAGCTGGGCATCGTGTTCGCCCGGCAGACGTGCA CCTACGGCCTGCTTCCCTGGCACGCGCGCTTCACCGAGTTCCACACGCAT CCCAGCGGACGCCACTTCGACGTGGAGACGTTCGCCAGCATCCTGTGCAA GTACTCGCGGTGCGAGCAGCGGTGGGGCACGTAGGCACATCGTTCGCGTG GGTAGCGACACCCTTATATTAACTAGTTACCTTAACATTATGTAAATTAT CGCCAGGAATTCCTTTTAGTTCGTAAGAGTAAACTGCAAAAGTGTATTGT TCACACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tango14-RA | 1372 | Tango14-RA | 57..1310 | 2..1255 | 6270 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1158599..1159387 | 1..789 | 98 | -> | Plus |
chr2L | 1159682..1160147 | 790..1256 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 1..837 | 298..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 1..837 | 298..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 1..837 | 298..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 1..837 | 298..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 1..837 | 298..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 2..1255 | 2..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 2..1255 | 2..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 19..1272 | 1..1254 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 2..1255 | 2..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango14-RA | 19..1272 | 1..1254 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1158679..1159467 | 1..789 | 99 | -> | Plus |
2L | 1159756..1160221 | 790..1256 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1158679..1159467 | 1..789 | 99 | -> | Plus |
2L | 1159756..1160221 | 790..1256 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1158679..1159467 | 1..789 | 99 | -> | Plus |
2L | 1159756..1160221 | 790..1256 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1158679..1159467 | 1..789 | 99 | -> | Plus |
arm_2L | 1159756..1160221 | 790..1256 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1158679..1159467 | 1..789 | 99 | -> | Plus |
2L | 1159756..1160221 | 790..1256 | 99 | Plus |
Translation from 297 to 1133
> RH48586.pep MIEVLCLLLGRILLLLVGGYELMWRLRERLNALAVRSYDLWRSKAAREAH ERRVLADCRSQLTKTPQHLVLVISPVDAGVDAVLLSRIFDFALDVGIKHV SLYDRRTKGRGYVDMADLCRSTNADTGSCLKWPPVASPSKLENQPKNGQK TNGYVNGSHSPQLQLHQISASDGHALIADVCRELYEDSKTELVQSLLKQK REALTEQISDMLSKRLGFEAPEPELGIVFARQTCTYGLLPWHARFTEFHT HPSGRHFDVETFASILCKYSRCEQRWGT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15168-PA | 282 | GF15168-PA | 31..282 | 31..278 | 973 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24771-PA | 278 | GG24771-PA | 1..278 | 1..278 | 1319 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13897-PA | 286 | GH13897-PA | 1..285 | 1..277 | 772 | 52.9 | Plus |
Dgri\GH10056-PA | 286 | GH10056-PA | 1..285 | 1..277 | 766 | 52.6 | Plus |
Dgri\GH10552-PA | 257 | GH10552-PA | 1..256 | 30..277 | 682 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tango14-PB | 278 | CG4775-PB | 1..278 | 1..278 | 1459 | 100 | Plus |
Tango14-PA | 278 | CG4775-PA | 1..278 | 1..278 | 1459 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21419-PA | 277 | GI21419-PA | 2..276 | 1..277 | 741 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15601-PA | 523 | GL15601-PA | 243..522 | 1..277 | 826 | 60.1 | Plus |
Dper\GL15601-PA | 523 | GL15601-PA | 1..228 | 1..225 | 571 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18423-PB | 281 | GA18423-PB | 1..280 | 1..277 | 822 | 60.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16799-PA | 278 | GM16799-PA | 1..278 | 1..278 | 1440 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23075-PA | 278 | GD23075-PA | 1..278 | 1..278 | 1432 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11212-PA | 277 | GJ11212-PA | 2..276 | 1..277 | 753 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18421-PA | 276 | GK18421-PA | 1..275 | 1..277 | 916 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17374-PA | 278 | GE17374-PA | 1..278 | 1..278 | 1307 | 93.9 | Plus |
Translation from 297 to 1133
> RH48586.hyp MIEVLCLLLGRILLLLVGGYELMWRLRERLNALAVRSYDLWRSKAAREAH ERRVLADCRSQLTKTPQHLVLVISPVDAGVDAVLLSRIFDFALDVGIKHV SLYDRRTKGRGYVDMADLCRSTNADTGSCLKWPPVASPSKLENQPKNGQK TNGYVNGSHSPQLQLHQISASDGHALIADVCRELYEDSKTELVQSLLKQK REALTEQISDMLSKRLGFEAPEPELGIVFARQTCTYGLLPWHARFTEFHT HPSGRHFDVETFASILCKYSRCEQRWGT*