BDGP Sequence Production Resources |
Search the DGRC for RH48616
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 486 |
Well: | 16 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14823-RA |
Protein status: | RH48616.pep: gold |
Preliminary Size: | 792 |
Sequenced Size: | 874 |
Gene | Date | Evidence |
---|---|---|
CG14823 | 2002-10-17 | Blastp of sequenced clone |
CG14823 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14823 | 2008-04-29 | Release 5.5 accounting |
CG14823 | 2008-08-15 | Release 5.9 accounting |
CG14823 | 2008-12-18 | 5.12 accounting |
874 bp (874 high quality bases) assembled on 2002-10-17
GenBank Submission: BT001833
> RH48616.complete GCACAGAGTGTTCCAGCTATTCGCTTGGGTTAGTCGGTTTGCGATAGCAA AGGGAGAAGCCAGCTCGCCATGGAGCCCACATGCAGCAGCAGTGTGGCGG AATTGGCCAAATACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTG GTGGAGCATCAGGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCG TAAGCGGAAACGATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGA GTACGGGCGCCATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTAC ATGCACTTAAGACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAA GGATCGGGGGCAAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCG CTGCGGGAGTGGATGCCCAGACCTCGACGATAACAACATTCCAGCCGCCT CCGACATCCTCCCCAGAGCCCAGTGCCAAGTGCCTGGACTGCATGGCCAC CACTGCCACGGATAATATTCCGGCAATCTGCAGGCACCGAGGACGACCAG AGGAGCCGTGCGGCATTTATCGCATCTCCCACGTCTACTGGCAGGACGCA CTCCGGATAATTGACCCGGACGACTCACTCGCCCGGGACTACGGAAGATG CGTGGTGGATGTCCAGTGCGCCGAGCGTATTGTGCGTAGCTATGTGCAGC GATATGGTGGCGAGGATTGCAATGGAGACGGACGGATCGAGTGTCGGGAT CATGTGAGGCTGCACATGAGAGGACCCGGCGGCTGCCGCAGGCAGGAGCC ACTGGGGAGCCTGTCTGAGAGGAGATTGGAAAACTGCTTGAAATACAGGG GGATTACTTAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14823-RA | 1127 | CG14823-RA | 238..1099 | 2..863 | 4310 | 100 | Plus |
CG14823-RB | 1103 | CG14823-RB | 650..1100 | 413..863 | 2255 | 100 | Plus |
CG14823-RD | 1133 | CG14823-RD | 655..1105 | 413..863 | 2255 | 100 | Plus |
CG14823-RB | 1103 | CG14823-RB | 132..542 | 2..412 | 2055 | 100 | Plus |
CG14823-RD | 1133 | CG14823-RD | 3..413 | 2..412 | 2055 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 7058536..7058946 | 2..412 | 1995 | 99 | Plus |
chr3L | 24539361 | chr3L | 7059774..7059999 | 412..637 | 1115 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 7060223..7060445 | 637..859 | 1085 | 99.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7058534..7058946 | 1..412 | 98 | -> | Plus |
chr3L | 7059775..7059999 | 413..637 | 99 | -> | Plus |
chr3L | 7060224..7060445 | 638..859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..790 | 70..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..790 | 70..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..792 | 70..861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..790 | 70..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..792 | 70..861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..860 | 1..859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..860 | 1..859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..860 | 1..859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..860 | 1..859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14823-RA | 1..860 | 1..859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7067555..7067779 | 413..637 | 100 | -> | Plus |
3L | 7068004..7068225 | 638..859 | 100 | Plus | |
3L | 7066314..7066726 | 1..412 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7067555..7067779 | 413..637 | 100 | -> | Plus |
3L | 7068004..7068225 | 638..859 | 100 | Plus | |
3L | 7066314..7066726 | 1..412 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7067555..7067779 | 413..637 | 100 | -> | Plus |
3L | 7068004..7068225 | 638..859 | 100 | Plus | |
3L | 7066314..7066726 | 1..412 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7061104..7061325 | 638..859 | 100 | Plus | |
arm_3L | 7059414..7059826 | 1..412 | 99 | -> | Plus |
arm_3L | 7060655..7060879 | 413..637 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7060655..7060879 | 413..637 | 100 | -> | Plus |
3L | 7061104..7061325 | 638..859 | 100 | Plus | |
3L | 7059414..7059826 | 1..412 | 99 | -> | Plus |
Translation from 69 to 860
> RH48616.pep MEPTCSSSVAELAKYSEDDVETDESKVVEHQEYAEALSMSGESRKRKRWT RRSCCTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVE VLEEDFPMVTAAGVDAQTSTITTFQPPPTSSPEPSAKCLDCMATTATDNI PAICRHRGRPEEPCGIYRISHVYWQDALRIIDPDDSLARDYGRCVVDVQC AERIVRSYVQRYGGEDCNGDGRIECRDHVRLHMRGPGGCRRQEPLGSLSE RRLENCLKYRGIT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25005-PA | 264 | GF25005-PA | 7..264 | 6..263 | 604 | 52.6 | Plus |
Dana\GF11418-PA | 161 | GF11418-PA | 35..141 | 138..244 | 174 | 35.4 | Plus |
Dana\GF11417-PA | 161 | GF11417-PA | 57..150 | 164..258 | 172 | 35.1 | Plus |
Dana\GF11420-PA | 166 | GF11420-PA | 32..149 | 138..260 | 168 | 34.9 | Plus |
Dana\GF11419-PA | 158 | GF11419-PA | 30..134 | 138..245 | 147 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14400-PA | 264 | GG14400-PA | 1..264 | 1..263 | 1141 | 86.4 | Plus |
Dere\GG20639-PA | 161 | GG20639-PA | 35..141 | 138..244 | 166 | 35.4 | Plus |
Dere\GG20638-PA | 161 | GG20638-PA | 57..150 | 164..258 | 164 | 34 | Plus |
Dere\GG20642-PA | 163 | GG20642-PA | 29..146 | 138..260 | 162 | 35.7 | Plus |
Dere\GG20641-PA | 159 | GG20641-PA | 31..151 | 137..258 | 160 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15386-PA | 226 | GH15386-PA | 37..225 | 54..262 | 345 | 41.1 | Plus |
Dgri\GH22645-PA | 163 | GH22645-PA | 35..141 | 138..244 | 172 | 35.7 | Plus |
Dgri\GH22647-PA | 157 | GH22647-PA | 24..142 | 135..258 | 170 | 35.4 | Plus |
Dgri\GH22644-PA | 161 | GH22644-PA | 57..149 | 164..257 | 164 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14823-PA | 263 | CG14823-PA | 1..263 | 1..263 | 1405 | 100 | Plus |
CG14823-PB | 116 | CG14823-PB | 1..114 | 1..114 | 582 | 100 | Plus |
CG14823-PD | 129 | CG14823-PD | 1..114 | 1..114 | 582 | 100 | Plus |
CG6435-PA | 163 | CG6435-PA | 29..144 | 138..258 | 170 | 37.1 | Plus |
CG6429-PA | 159 | CG6429-PA | 31..151 | 137..258 | 166 | 33.1 | Plus |
CG6426-PA | 161 | CG6426-PA | 57..149 | 164..257 | 162 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12991-PA | 230 | GI12991-PA | 40..227 | 53..260 | 372 | 42.1 | Plus |
Dmoj\GI21159-PA | 145 | GI21159-PA | 19..118 | 138..244 | 176 | 34.3 | Plus |
Dmoj\GI21157-PA | 190 | GI21157-PA | 55..162 | 137..244 | 167 | 33.3 | Plus |
Dmoj\GI21158-PA | 158 | GI21158-PA | 33..148 | 138..258 | 153 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25021-PA | 254 | GL25021-PA | 1..253 | 1..262 | 595 | 50.4 | Plus |
Dper\GL11565-PA | 161 | GL11565-PA | 35..154 | 138..255 | 162 | 33.9 | Plus |
Dper\GL11564-PA | 161 | GL11564-PA | 57..150 | 164..258 | 154 | 33 | Plus |
Dper\GL11567-PA | 132 | GL11567-PA | 15..108 | 164..258 | 149 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13274-PA | 254 | GA13274-PA | 1..253 | 1..262 | 618 | 52.3 | Plus |
Dpse\GA19586-PA | 156 | GA19586-PA | 21..143 | 131..257 | 168 | 32.8 | Plus |
Dpse\GA19580-PA | 161 | GA19580-PA | 35..154 | 138..255 | 162 | 33.9 | Plus |
Dpse\GA19584-PA | 161 | GA19584-PA | 57..150 | 164..258 | 154 | 33 | Plus |
Dpse\GA19591-PA | 132 | GA19591-PA | 5..110 | 149..260 | 150 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14814-PA | 263 | GM14814-PA | 1..263 | 1..263 | 1270 | 95.4 | Plus |
Dsec\GM21736-PA | 163 | GM21736-PA | 29..146 | 138..260 | 175 | 36.5 | Plus |
Dsec\GM21731-PA | 161 | GM21731-PA | 57..150 | 164..258 | 163 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13989-PA | 263 | GD13989-PA | 1..263 | 1..263 | 1355 | 96.6 | Plus |
Dsim\GD11230-PA | 163 | GD11230-PA | 29..146 | 138..260 | 175 | 36.5 | Plus |
Dsim\GD11227-PA | 161 | GD11227-PA | 35..141 | 138..244 | 162 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13134-PA | 225 | GJ13134-PA | 30..222 | 49..260 | 417 | 44.9 | Plus |
Dvir\GJ21010-PA | 161 | GJ21010-PA | 35..153 | 138..258 | 182 | 36 | Plus |
Dvir\GJ21007-PA | 145 | GJ21007-PA | 42..135 | 164..258 | 163 | 34 | Plus |
Dvir\GJ21009-PA | 161 | GJ21009-PA | 57..150 | 164..258 | 161 | 33 | Plus |
Dvir\GJ21008-PA | 161 | GJ21008-PA | 56..150 | 163..258 | 152 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16648-PA | 274 | GK16648-PA | 33..272 | 20..256 | 494 | 46.2 | Plus |
Dwil\GK22025-PA | 161 | GK22025-PA | 35..149 | 138..257 | 172 | 32 | Plus |
Dwil\GK22026-PA | 166 | GK22026-PA | 36..155 | 138..255 | 164 | 34.7 | Plus |
Dwil\GK22028-PA | 172 | GK22028-PA | 41..158 | 138..260 | 157 | 32.8 | Plus |
Dwil\GK22027-PA | 163 | GK22027-PA | 27..151 | 124..258 | 146 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21589-PA | 262 | GE21589-PA | 1..262 | 1..263 | 1116 | 89.4 | Plus |
Dyak\GE11830-PA | 164 | GE11830-PA | 29..146 | 138..260 | 174 | 36.5 | Plus |
Dyak\GE11827-PA | 161 | GE11827-PA | 57..150 | 164..258 | 163 | 34 | Plus |
Dyak\GE11828-PA | 159 | GE11828-PA | 33..151 | 138..258 | 161 | 32.5 | Plus |
Dyak\GE11829-PA | 159 | GE11829-PA | 31..151 | 137..258 | 159 | 33.1 | Plus |
Translation from 69 to 858
> RH48616.hyp MEPTCSSSVAELAKYSEDDVETDESKVVEHQEYAEALSMSGESRKRKRWT RRSCCTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVE VLEEDFPMVTAAGVDAQTSTITTFQPPPTSSPEPSAKCLDCMATTATDNI PAICRHRGRPEEPCGIYRISHVYWQDALRIIDPDDSLARDYGRCVVDVQC AERIVRSYVQRYGGEDCNGDGRIECRDHVRLHMRGPGGCRRQEPLGSLSE RRLENCLKYRGIT
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14823-PA | 263 | CG14823-PA | 1..263 | 1..263 | 1405 | 100 | Plus |
CG14823-PB | 116 | CG14823-PB | 1..114 | 1..114 | 582 | 100 | Plus |
CG14823-PD | 129 | CG14823-PD | 1..114 | 1..114 | 582 | 100 | Plus |
CG6435-PA | 163 | CG6435-PA | 29..144 | 138..258 | 170 | 37.1 | Plus |
CG6429-PA | 159 | CG6429-PA | 31..151 | 137..258 | 166 | 33.1 | Plus |