![]() | BDGP Sequence Production Resources |
Search the DGRC for RH51096
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 510 |
Well: | 96 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15443-RA |
Protein status: | RH51096.pep: gold |
Preliminary Size: | 1096 |
Sequenced Size: | 1295 |
Gene | Date | Evidence |
---|---|---|
CG15443 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15443 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15443 | 2004-10-25 | Blastp of sequenced clone |
CG15443 | 2008-04-29 | Release 5.5 accounting |
CG15443 | 2008-08-15 | Release 5.9 accounting |
CG15443 | 2008-12-18 | 5.12 accounting |
1295 bp (1295 high quality bases) assembled on 2004-10-25
GenBank Submission: BT015957
> RH51096.complete GATTATCGGAATATTGCTCACTTGCTAAGGATTCCATGAAATTTAAACAA ATGGACTTTGTGACGACAACTGGGGAGGGAAGTTTTCTGCGAAACAAGAT TCGTGCATATGCCAAGGATCACCGTGTTGAGTGCCGCATAAAGGCGAAAG ACTCATTGCGCATTGGACTTGGACAGGTTAAGCAGGAAGTGGCGGCTCTT GAGATGGGCACCAAGGACGTCATTGGAATGGCCAGCAGGATCAAGCGTCG CAAGCACGCCACCTCCGAGGATCTGTGCCGCTTGTCGCTGGGGTTCCTCC AGAGCAATGACAACATCAATGCATTCGCAGCTATTCCTGGCGCCATTCAG GTTCTGGTTAAGGAGCTAACTGGACCTCACATTCAACGACAGACAGATGC CGTGGAGTGCTTGTGTAATCTTTCCTTGGGCGAGGCCCATGTCTCCGAAA AGATTGTCACTTTGGCGGGCAGCTACATGGTCACCTACCTTGATGGCAAG GCCGAACGCCTCAAGCGCAGTTGCCTGTGGACACTGGCCAACGTTCTGGG CACATGCGACAAGGCCGGCAGCGTATTGCTGCAAATGCAAATAGTACCCA AGCTGTGGAGGCTCTACATCGAGCCCAATGGCTGCCAAGAAGATGCGGCC ATCTGCCTCTCCCTGGTGGCCACCCGCTGCCCGCAGCATGTGAGTGACGA GGATCGAAGGTACATTGGCCAGAATCTGCCTGAGAAGCTCCACGGCCAGC CTGCCAGCGAGTACTTCATGTACATAGTGCACCAACTGGAAATAGTGACA CAGGAGCACAAGTTAGATGCTCAACAGGCCGAATGCCTGGTGCGTTTCTT TGAAGCCACCTTAGCATCGCCAGCCGACCGGCTGTGCCTAATCTACGCCG TGCGTGTAATGACCAATCTGGTAGCCCTAGGTGACACAAGTCTAATATTC GCACTGGCAGACCCGCAGAATCTTGTGCAAACCCTAAACCAGCTCTTCGC TCTGCGAGATCCAGATCTCAACCTGGACGCGATGCGCTTGCTCAAGAACT GTCTGCACTTGAAGGTAGCAGATTCCAACCTGGTACTGAATAGCTTGCAA ATATACGCATAGGCTTATGGTTAAGAATAAGTCTTGCAAATCTCTTTATT GGTCTTAGAGTACATATAAATATAAAGCCACGGACTTTTGAGTACTCGAG AATGTATTGTAAATGAACATGGATTGCCGCTAAGCAAAACTAAATCACTA ATGGAAACAGAATAAAATAAATAAATAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 6420..6463 | 1236..1279 | 130 | 77.3 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 1013..1060 | 1232..1279 | 123 | 72.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4460812..4461698 | 373..1259 | 99 | <- | Minus |
chr2L | 4461753..4462124 | 1..372 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1077 | 36..1112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1077 | 36..1112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1077 | 36..1112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1077 | 36..1112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1077 | 36..1112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 443..1721 | 1..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1278 | 2..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1278 | 2..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 443..1721 | 1..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15443-RA | 1..1278 | 2..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4461657..4462563 | 373..1279 | 100 | <- | Minus |
2L | 4462624..4462994 | 1..372 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4461657..4462563 | 373..1279 | 100 | <- | Minus |
2L | 4462624..4462994 | 1..372 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4461657..4462563 | 373..1279 | 100 | <- | Minus |
2L | 4462624..4462994 | 1..372 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4461657..4462563 | 373..1279 | 100 | <- | Minus |
arm_2L | 4462624..4462994 | 1..372 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4462624..4462994 | 1..372 | 99 | Minus | |
2L | 4461657..4462563 | 373..1279 | 100 | <- | Minus |
Translation from 2 to 1111
> RH51096.hyp LSEYCSLAKDSMKFKQMDFVTTTGEGSFLRNKIRAYAKDHRVECRIKAKD SLRIGLGQVKQEVAALEMGTKDVIGMASRIKRRKHATSEDLCRLSLGFLQ SNDNINAFAAIPGAIQVLVKELTGPHIQRQTDAVECLCNLSLGEAHVSEK IVTLAGSYMVTYLDGKAERLKRSCLWTLANVLGTCDKAGSVLLQMQIVPK LWRLYIEPNGCQEDAAICLSLVATRCPQHVSDEDRRYIGQNLPEKLHGQP ASEYFMYIVHQLEIVTQEHKLDAQQAECLVRFFEATLASPADRLCLIYAV RVMTNLVALGDTSLIFALADPQNLVQTLNQLFALRDPDLNLDAMRLLKNC LHLKVADSNLVLNSLQIYA*
Translation from 35 to 1111
> RH51096.pep MKFKQMDFVTTTGEGSFLRNKIRAYAKDHRVECRIKAKDSLRIGLGQVKQ EVAALEMGTKDVIGMASRIKRRKHATSEDLCRLSLGFLQSNDNINAFAAI PGAIQVLVKELTGPHIQRQTDAVECLCNLSLGEAHVSEKIVTLAGSYMVT YLDGKAERLKRSCLWTLANVLGTCDKAGSVLLQMQIVPKLWRLYIEPNGC QEDAAICLSLVATRCPQHVSDEDRRYIGQNLPEKLHGQPASEYFMYIVHQ LEIVTQEHKLDAQQAECLVRFFEATLASPADRLCLIYAVRVMTNLVALGD TSLIFALADPQNLVQTLNQLFALRDPDLNLDAMRLLKNCLHLKVADSNLV LNSLQIYA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23989-PA | 358 | GF23989-PA | 8..358 | 12..358 | 1057 | 62.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24370-PA | 353 | GG24370-PA | 1..353 | 6..358 | 1631 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13129-PA | 375 | GH13129-PA | 19..367 | 18..358 | 853 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15443-PB | 358 | CG15443-PB | 1..358 | 1..358 | 1832 | 100 | Plus |
CG15443-PA | 358 | CG15443-PA | 1..358 | 1..358 | 1832 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22770-PA | 368 | GI22770-PA | 20..368 | 18..358 | 926 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15392-PA | 364 | GL15392-PA | 1..364 | 6..358 | 1063 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13734-PA | 364 | GA13734-PA | 10..364 | 14..358 | 1066 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18086-PA | 357 | GM18086-PA | 1..353 | 6..358 | 1744 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22704-PA | 357 | GD22704-PA | 1..353 | 6..358 | 1699 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23321-PA | 367 | GJ23321-PA | 1..367 | 6..358 | 933 | 52.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23924-PA | 253 | GK23924-PA | 16..246 | 16..245 | 672 | 56.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14709-PA | 353 | GE14709-PA | 1..353 | 6..358 | 1599 | 85.6 | Plus |