BDGP Sequence Production Resources |
Search the DGRC for RH51268
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 512 |
Well: | 68 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9368-RB |
Protein status: | RH51268.pep: gold |
Preliminary Size: | 768 |
Sequenced Size: | 1825 |
Gene | Date | Evidence |
---|---|---|
CG9368 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9368 | 2002-04-22 | Blastp of sequenced clone |
CG9368 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9368 | 2008-04-29 | Release 5.5 accounting |
CG9368 | 2008-08-15 | Release 5.9 accounting |
CG9368 | 2008-12-18 | 5.12 accounting |
1825 bp (1825 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113598
> RH51268.complete CATTGCTGGGTGAACGCACAAAGAGCTCTGCTCAGCACTCCTTGTAGATA CCCATCGCAGGACAAAGGCAAAGCTCGAAACGCTTCTGGCAGCATTTTCA AAGGATAAAAAGGAATTCTCACAAAAACCCAGGAAAGATGCATGCCAGAT TTGCGGATCCCGAGCCAGCGTCTCCGGACAGCGTTGATGGAATCGAAACG GAGTCACTGGAGGCGCGGATTGAGGCCTTCAAGCAAAATCCCCAGAACAT GGCCGCGTTGCGGGAGGCGCTCGACGATGTGCTCCTGCGGGCTGAGACGG AGGCGAACAGGCGGGCAGTTGAGAGCCAGAAATCGCAACAGGGCAAGGAA AAACGACCGAATTTTAAGAACGGCAAGGTGGTGAATCGCGCTCGAGGATT CGTGGTGCGGATCTTCGATGCCATATGCAATTGCGCCAACAACAATGCGG CGGCGGCCACGACGCGTTTCAAGCTGAGAAGCAACAGCGGCGGAGGGGGA GGCGGCGGAGGTGGTGGTGGCGGAGCCAGCGGAAATGGCAAGCGTCAGCA GTCGCAGAATGAGCCGGAAACCCTAGTCCTGACCAAGAAGAAGCCCGCCG GCGAAGGCAAGAAAAAGAAGGGAGTCAGCATGGCCGATGACGTTCAAGCC GGCGTTCGACTGATGGACTAAGCTAGCTATAATGGACAATGGTTGTCCAT GCAATGGGAAAACATAATCAAAATTACCACCAACCCCTTCCTGAACAATG AACTCTTACTCAGCAATCGTCTACTGTCATCTTACCACCTTAATGGATCC TGTCCAGAAGCATTTTCTTCGCTCAAACGTCTTAGGCACAAACCAAATTC TACGTCTTCCCCTTGAAGACCACCAAGTTTATGGTGTAAGCCCTGCAAAG GAATCTTAAAATCGCATAGAACAGGGCTGATGGAAAAGCTTTAGCTCTCT ACTATATTGTTTGATATACCCAAATGTGATCCCAGATCGTAATGTTAACG AAAACTCAACTCGAAGCACAAGCAACTCTTCTAGGCTAGTTATGAAAGGA GAAAACCCCTATATACGACATTTGTATACACTCTCCAGCTCTCAGACATT ATTTGGTCCCCACGCACAACACAATCAACGGCATTACACAATCCCAGTGG AATCGACGAGGGTTTGCCCCGAATCTCCACCTAATTATAACTACGATATA TCAAATTATATACCTAACTATATGTGTATGTGTATGACTATAGTTGTCTA CGGAACCACCAACCTATTTAGATGTGTGTGTGTAGCAGTTAAAAGTATTT CCAAACCAAACCAAAGCAGCTAACAACAAACGGTTCAATATACAAGCATT AATGTGTACTGATTTTATATACAATGTACTAACTACTATATATACGTGTG AATGTCATTAGACTCTTAGTTGTTTACACAGGTTTCCTCGAACATCCTCA TCAAATTCATCAACTAATCCGCACACACGCTCTAATCGGATATATTTTTG TGAGACCCTTTTTGGAGAGATCTACATACATATATAAAGACACTACTCCT ATACCGAAACCGAAATTTAAGATATCGATTACTCTCGATTACAGAGAACT TTGTACGCAGATTTGCAAGGCAACCATTTTGTATAAGATTTGCATTTATT TTGTAACCTCTTGAATGCAAAGATCTCCCTAAGTTTGAATGCATTGCTAA GCCAATTGGATGTTTATCGATTACAAAATGTATAAGTATGCGTTATGCAA ACATAAAACCGTTGTATTTAGTTAATAATATCAGCAATAAACTATAACAT GTTTGAAATCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9368-RB | 1869 | CG9368-RB | 57..1868 | 1..1812 | 9060 | 100 | Plus |
CG9368-RA | 1884 | CG9368-RA | 432..1883 | 361..1812 | 7260 | 100 | Plus |
CG9368-RC | 2425 | CG9368-RC | 976..2425 | 361..1810 | 7250 | 100 | Plus |
CG9368-RA | 1884 | CG9368-RA | 57..420 | 1..364 | 1805 | 99.7 | Plus |
CG9368-RC | 2425 | CG9368-RC | 6..365 | 1..360 | 1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19591017..19591357 | 1..341 | 100 | -> | Plus |
chr3L | 19591423..19591441 | 342..360 | 100 | -> | Plus |
chr3L | 19592052..19593501 | 361..1810 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..534 | 138..671 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..534 | 138..671 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..534 | 138..671 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..534 | 138..671 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..534 | 138..671 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..1810 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..1810 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 4..1813 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 1..1810 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9368-RB | 4..1813 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19601636..19601976 | 1..341 | 100 | -> | Plus |
3L | 19602042..19602060 | 342..360 | 100 | -> | Plus |
3L | 19602671..19604120 | 361..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19601636..19601976 | 1..341 | 100 | -> | Plus |
3L | 19602042..19602060 | 342..360 | 100 | -> | Plus |
3L | 19602671..19604120 | 361..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19601636..19601976 | 1..341 | 100 | -> | Plus |
3L | 19602042..19602060 | 342..360 | 100 | -> | Plus |
3L | 19602671..19604120 | 361..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19594736..19595076 | 1..341 | 100 | -> | Plus |
arm_3L | 19595142..19595160 | 342..360 | 100 | -> | Plus |
arm_3L | 19595771..19597220 | 361..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19594736..19595076 | 1..341 | 100 | -> | Plus |
3L | 19595142..19595160 | 342..360 | 100 | -> | Plus |
3L | 19595771..19597220 | 361..1810 | 100 | Plus |
Translation from 137 to 670
> RH51268.pep MHARFADPEPASPDSVDGIETESLEARIEAFKQNPQNMAALREALDDVLL RAETEANRRAVESQKSQQGKEKRPNFKNGKVVNRARGFVVRIFDAICNCA NNNAAAATTRFKLRSNSGGGGGGGGGGGGASGNGKRQQSQNEPETLVLTK KKPAGEGKKKKGVSMADDVQAGVRLMD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23709-PA | 177 | GF23709-PA | 1..177 | 1..177 | 659 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16047-PA | 181 | GG16047-PA | 1..181 | 1..177 | 876 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16938-PA | 174 | GH16938-PA | 1..174 | 1..177 | 597 | 73.2 | Plus |
Dgri\GH23894-PA | 103 | GH23894-PA | 9..103 | 75..177 | 315 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9368-PB | 177 | CG9368-PB | 1..177 | 1..177 | 904 | 100 | Plus |
CG9368-PA | 182 | CG9368-PA | 1..182 | 1..177 | 883 | 96.7 | Plus |
CG9368-PD | 87 | CG9368-PD | 1..75 | 1..75 | 370 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11799-PA | 173 | GI11799-PA | 1..173 | 1..177 | 596 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20946-PA | 176 | GL20946-PA | 1..176 | 1..177 | 614 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21735-PA | 176 | GA21735-PA | 1..176 | 1..177 | 614 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19607-PA | 172 | GM19607-PA | 1..172 | 1..177 | 865 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14816-PA | 193 | GD14816-PA | 1..193 | 1..177 | 673 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13503-PA | 169 | GJ13503-PA | 1..169 | 1..177 | 613 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19166-PA | 178 | GK19166-PA | 1..178 | 1..177 | 426 | 69.2 | Plus |
Translation from 137 to 670
> RH51268.hyp MHARFADPEPASPDSVDGIETESLEARIEAFKQNPQNMAALREALDDVLL RAETEANRRAVESQKSQQGKEKRPNFKNGKVVNRARGFVVRIFDAICNCA NNNAAAATTRFKLRSNSGGGGGGGGGGGGASGNGKRQQSQNEPETLVLTK KKPAGEGKKKKGVSMADDVQAGVRLMD*