BDGP Sequence Production Resources |
Search the DGRC for RH51312
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 513 |
Well: | 12 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10257-RA |
Protein status: | RH51312.pep: gold |
Preliminary Size: | 654 |
Sequenced Size: | 1180 |
Gene | Date | Evidence |
---|---|---|
CG10257 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10257 | 2002-03-28 | Blastp of sequenced clone |
CG10257 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10257 | 2008-04-29 | Release 5.5 accounting |
CG10257 | 2008-08-15 | Release 5.9 accounting |
CG10257 | 2008-12-18 | 5.12 accounting |
1180 bp (1180 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094933
> RH51312.complete GAGTGTGCCATTGGCGCTAACAACGTGCGGTTCGGTCTTGGGTTTTCTCG CCGCCCGTTGAATTCAGAGAGCGGAATAGATTCTAGCCCGATTTCGGGGT CTAAGCCCACAAACATAGGGGTGGAGTGAAAGTGCATTGCAGCCAGATCT GCAGATTAGACAAACTTGAGTTCCTTGAACTTCCCAAATATTATAGATAT ATTATACCTACGTGGTTTTCTCTGGTTTTGTGTAACCCATTTAGTTGGCT GCACTTTAAAGGCGATTACTATAAATATTAATAGGATTTATTGATTGACT GGCGGTGGGCCAGAGCCAGATCGACACGAGGCTTCGGACCCATGTCCTTT CTTTCGCCCACACTGCGCCTGGAGAATCTGTCCACGCAGCCCACGATGAC GCAGGATCATGTGCCCGAGGACCAGCGCTATAACAAACAGAATATTGTGG CTCAATGGTGTGTGCCCATCAATGGCAAGATGTACCGCATCGAGCTGGAA CATGGCACAACCAGTGGGCGGCGCATGATTTGGGTCAATGGACGGGAAGT CCTGCGTCGCGACTGGATGTTCAAACTGGTTGGCGAAGACACCTTTCACA TCGATCAGACGCGCTGCATCATACGCGTTGATCCTGCGCCGGGCTTCAAA TACGAGTACTCCCTCTACATCGACGGCAAATCGCACGACCAGTACACCGA GGACATGACACGGCAATATCGACTGTGGCTATATACGGATGATGCGGCCG CCGATGCGCCGCAGGAATATAGAATAATGCTCAAACTGGACACGCTGAGT CTCTACGTAAACGATGAGCTGCGCACCGAGGAGTCGGTTTTTGTTCACGG CGGCACAGACACCAAGTTCCTGCTGCAGGACACGGAATTCGTGCTTCAGG CACGCTCAAGTGGCAATAAACATGATGGCATCGTTCACACTCTGCTGGCG AATGGGGTGGCAGTTCCGGAGGCGAAGATTCAGGAGATTATGCAAGAGCC GGTCTCCATTTTGCAGAGCAGCAACTGAGGGGCAATGGAAGGCTCCTCCA TACGATACGATAGGATAACGTTTTGCATTTGTTGAATTTGTGCCCAGTTG TTAATAAACGTTTTTCGAAAGTTCTTTTCAATTTGATTAAAACATAAACT TTGTCTTATACAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10829889..10830364 | 2..479 | 2265 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 10831411..10831743 | 832..1164 | 1665 | 100 | Plus |
chr2R | 21145070 | chr2R | 10831044..10831332 | 545..833 | 1445 | 100 | Plus |
chr2R | 21145070 | chr2R | 10830471..10830539 | 478..546 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14942612..14943089 | 2..479 | 2390 | 100 | Plus |
2R | 25286936 | 2R | 14944137..14944470 | 832..1165 | 1670 | 100 | Plus |
2R | 25286936 | 2R | 14943770..14944058 | 545..833 | 1445 | 100 | Plus |
2R | 25286936 | 2R | 14943197..14943265 | 478..546 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14943811..14944288 | 2..479 | 2390 | 100 | Plus |
2R | 25260384 | 2R | 14945336..14945669 | 832..1165 | 1670 | 100 | Plus |
2R | 25260384 | 2R | 14944969..14945257 | 545..833 | 1445 | 100 | Plus |
2R | 25260384 | 2R | 14944396..14944464 | 478..546 | 345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10829888..10830364 | 1..479 | 98 | -> | Plus |
chr2R | 10830473..10830538 | 480..545 | 100 | -> | Plus |
chr2R | 10831045..10831332 | 546..833 | 100 | -> | Plus |
chr2R | 10831413..10831743 | 834..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 1..687 | 342..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 1..687 | 342..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 1..687 | 342..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 1..687 | 342..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 1..687 | 342..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 2..1164 | 2..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 2..1164 | 2..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 214..1377 | 1..1164 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 2..1161 | 2..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10257-RA | 214..1377 | 1..1164 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14942611..14943089 | 1..479 | 99 | -> | Plus |
2R | 14943199..14943264 | 480..545 | 100 | -> | Plus |
2R | 14943771..14944058 | 546..833 | 100 | -> | Plus |
2R | 14944139..14944469 | 834..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14942611..14943089 | 1..479 | 99 | -> | Plus |
2R | 14943199..14943264 | 480..545 | 100 | -> | Plus |
2R | 14943771..14944058 | 546..833 | 100 | -> | Plus |
2R | 14944139..14944469 | 834..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14942611..14943089 | 1..479 | 99 | -> | Plus |
2R | 14943199..14943264 | 480..545 | 100 | -> | Plus |
2R | 14943771..14944058 | 546..833 | 100 | -> | Plus |
2R | 14944139..14944469 | 834..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10830704..10830769 | 480..545 | 100 | -> | Plus |
arm_2R | 10831276..10831563 | 546..833 | 100 | -> | Plus |
arm_2R | 10831644..10831974 | 834..1164 | 100 | Plus | |
arm_2R | 10830116..10830594 | 1..479 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14943810..14944288 | 1..479 | 99 | -> | Plus |
2R | 14944398..14944463 | 480..545 | 100 | -> | Plus |
2R | 14944970..14945257 | 546..833 | 100 | -> | Plus |
2R | 14945338..14945668 | 834..1164 | 100 | Plus |
Translation from 341 to 1027
> RH51312.hyp MSFLSPTLRLENLSTQPTMTQDHVPEDQRYNKQNIVAQWCVPINGKMYRI ELEHGTTSGRRMIWVNGREVLRRDWMFKLVGEDTFHIDQTRCIIRVDPAP GFKYEYSLYIDGKSHDQYTEDMTRQYRLWLYTDDAAADAPQEYRIMLKLD TLSLYVNDELRTEESVFVHGGTDTKFLLQDTEFVLQARSSGNKHDGIVHT LLANGVAVPEAKIQEIMQEPVSILQSSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10257-PA | 228 | CG10257-PA | 1..228 | 1..228 | 1204 | 100 | Plus |
Translation from 341 to 1027
> RH51312.pep MSFLSPTLRLENLSTQPTMTQDHVPEDQRYNKQNIVAQWCVPINGKMYRI ELEHGTTSGRRMIWVNGREVLRRDWMFKLVGEDTFHIDQTRCIIRVDPAP GFKYEYSLYIDGKSHDQYTEDMTRQYRLWLYTDDAAADAPQEYRIMLKLD TLSLYVNDELRTEESVFVHGGTDTKFLLQDTEFVLQARSSGNKHDGIVHT LLANGVAVPEAKIQEIMQEPVSILQSSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12307-PA | 227 | GF12307-PA | 1..227 | 1..227 | 1174 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20493-PA | 228 | GG20493-PA | 1..228 | 1..228 | 1221 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21105-PA | 232 | GH21105-PA | 1..232 | 1..227 | 1052 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10257-PA | 228 | CG10257-PA | 1..228 | 1..228 | 1204 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18707-PA | 238 | GI18707-PA | 1..238 | 1..227 | 1033 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10380-PA | 203 | GL10380-PA | 1..203 | 1..227 | 1004 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10198-PA | 230 | GA10198-PA | 1..230 | 1..227 | 1124 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21585-PA | 228 | GM21585-PA | 1..228 | 1..228 | 1220 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11091-PA | 207 | GD11091-PA | 1..207 | 1..228 | 1069 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21727-PA | 231 | GJ21727-PA | 1..231 | 1..227 | 1038 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21519-PA | 222 | GK21519-PA | 1..222 | 1..227 | 1057 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13625-PA | 228 | GE13625-PA | 1..228 | 1..228 | 1209 | 97.8 | Plus |