Clone RH51443 Report

Search the DGRC for RH51443

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:514
Well:43
Vector:pFlc-1
Associated Gene/TranscriptPdfr-RA
Protein status:RH51443.pep: gold
Preliminary Size:1902
Sequenced Size:2929

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13758 2002-01-01 Sim4 clustering to Release 2
CG13758 2003-01-01 Sim4 clustering to Release 3
CG13758 2005-05-17 Blastp of sequenced clone
CG13758 2008-04-29 Release 5.5 accounting
CG13758 2008-08-15 Release 5.9 accounting
pdfr 2008-12-18 5.12 accounting

Clone Sequence Records

RH51443.complete Sequence

2929 bp (2929 high quality bases) assembled on 2005-05-17

GenBank Submission: BT022705

> RH51443.complete
CAGGTCATAACGGCTTCGGCACTCGTGGCGTTCGTTTCGCTTTTCCAGCA
AAAAAAAAAAATTGGCATAGGCAATTGCCCAATTGATTTCAACCCGCTTT
CGAAAACGTTTTTCAAGTTCATACTCCCAAATTTTTTTTTTTTTTGCTGT
GCTTCCAACGCGAGTTTGAAGAAAAAAATAACAAAAAAAAAACAAATAAA
TATCAAAAACAAAACAAAGATTTAAAAACTCGAAAACGCCGAGAATCGAG
TCCCCGGAACCCAAAAAAAAAAGAAAAGAAAAAACCACCAGCAGCAGTAG
CAGCAGCGAAACCGGCGGCACATTTACTATGCGGTCGATGGCAAAATGAC
CCTCCTGTCGAACATTCTCGACTGCGGAGGCTGTATTTCCGCCCAGCGCT
TCACCCGCCTGCTGCGCCAGTCCGGCTCATCAGGACCATCCCCATCTGCA
CCGACGGCCGGAACATTTGAATCAAAATCCATGCTGGAGCCAACATCCTC
GCACAGCCTGGCGACCGGACGCGTGCCACTACTGCACGATTTCGATGCCT
CGACAACGGAATCGCCGGGAACGTATGTCCTCGACGGTGTCGCCAGGGTG
GCCCAATTGGCCCTGGAGCCCACCGTCATGGACGCACTGCCCGATTCGGA
CACGGAACAGGTTCTCGGTAATCTCAACAGCAGCGCGCCCTGGAATCTAA
CGCTTGCGTCGGCAGCGGCCACCAATTTCGAGAACTGCTCGGCGCTTTTT
GTCAATTACACCCTACCACAAACAGGACTCTACTGCAATTGGACCTGGGA
CACATTGCTCTGCTGGCCACCCACTCCGGCTGGAGTCCTTGCACGGATGA
ATTGTCCTGGCGGCTTTCATGGCGTAGATACGCGCAAATTCGCCATCCGA
AAGTGTGAGCTGGATGGTCGATGGGGCAGCAGGCCAAATGCCACGGAGGT
GAATCCGCCGGGATGGACGGACTACGGGCCGTGTTACAAGCCGGAGATTA
TCCGTCTCATGCAGCAGATGGGCAGCAAGGACTTCGATGCCTACATAGAC
ATTGCCAGGAGGACTCGAACCCTGGAGATCGTGGGCCTCTGCCTCTCCCT
GTTCGCCCTTATAGTTTCCCTGCTGATCTTCTGCACATTTCGCTCGCTGC
GAAACAATCGCACCAAGATCCACAAGAATCTTTTCGTCGCCATGGTGCTG
CAGGTGATCATTCGCCTGACCTTGTATCTCGACCAATTCCGGCGGGGAAA
CAAGGAGGCGGCCACCAACACGAGTCTCTCTGTCATTGAGAACACGCCCT
ATTTGTGCGAAGCATCCTATGTACTTCTGGAGTACGCTCGTACCGCCATG
TTCATGTGGATGTTCATCGAGGGCCTTTACCTGCACAACATGGTCACCGT
GGCCGTTTTCCAGGGCAGCTTTCCCCTCAAGTTCTTCTCGCGACTCGGCT
GGTGTGTGCCCATTCTGATGACCACCGTGTGGGCGAGATGCACGGTCATG
TATATGGACACCTCGCTGGGCGAATGCTTGTGGAACTATAATCTCACGCC
CTACTACTGGATCCTCGAGGGGCCACGACTAGCGGTCATACTGCTAAACT
TCTGTTTCCTGGTGAACATTATCCGAGTGCTGGTAATGAAGCTGCGTCAA
TCGCAGGCCAGCGATATAGAACAGACTCGCAAGGCAGTTAGAGCGGCTAT
AGTCCTACTACCACTTTTGGGTATAACCAATCTCCTGCACCAGCTGGCTC
CTCTGAAAACGGCCACGAACTTCGCGGTCTGGTCGTATGGCACCCACTTT
CTCACCTCGTTTCAGGGATTTTTTATAGCGCTAATTTACTGCTTTCTAAA
TGGCGAGGTTCGTGCCGTGCTACTAAAGAGTCTGGCCACCCAGCTGTCGG
TGCGAGGTCATCCGGAATGGGCGCCGAAAAGGGCATCTATGTACTCGGGT
GCTTATAACACGGCGCCGGATACGGATGCAGTGCAGCCTGCAGGAGATCC
ATCGGCCACTGGAAAGCGAATATCACCGCCGAATAAAAGGCTGAATGGAA
GAAAGCCGAGCAGTGCCAGCATTGTGATGATTCACGAGCCTCAACAGCGC
CAGCGACTGATGCCCCGGCTGCAAAACAAGGCGCGGGAAAAGGGCAAGGA
CCGGGTGGAGAAGACGGATGCGGAAGCGGAGCCGGATCCGACCATCTCCC
ACATTCACAGCAAGGAGGCGGGCAGCGCGAGATCGCGAACTCGCGGCTCC
AAGTGGATAATGGGCATCTGCTTCCGGGGTCAAAAGGTACTAAGAGTACC
GTCAGCGTCATCCGTGCCACCCGAGTCAGTTGTATTTGAGTTGTCAGAGC
AGTAGACCAAAACCTAGCCTAACTAATAGATGTAGCCATAGCCGTAGCCA
AATAGCCGTAGAAGTAGCCAACGCCATGTAGCCCACCACCACAGTAGCCA
GCACCCACACAATCGGACCGGAAATGATCCCAAAGATAACCCAGAACCCG
ACTATTCCTGCATCTCCCATCGACCCACCAAGCAAGCCAGCTGGAAACAG
CACATATGTAAAATACCCCAACAAAATATCGCAGTTCTTATACCCAAGAT
CATTTTGAACAGAAAGTAAGCTCATTGTTTTGTAATTCAAATTAAACCAA
TAGACATTTAATTTAAATAGTTATTTTCGCTTGCCTTCGGTTCTTGCTCC
ACTGTACTTATGTAAATACATACATACCTTTATTTGTGTAAGCCATATCC
AAACCCTTTCCAAAATCTAGAAATCTCCTATCCTTTCGAAATCGGCTAAT
CCTACGAAAATTCAAATTTCCCTACAAGTTTTACAAAATATTTTTGATGA
CAATAAATTTCCAATAGCGTCACCTTCTGTTCTGGACACGCAAATACATT
CAAAAACACTCGCAAAAAAAAAAAAAAAA

RH51443.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
pdfr-RA 3092 pdfr-RA 3..2913 4..2914 14555 100 Plus
pdfr.b 3294 pdfr.b 385..3294 4..2913 14550 100 Plus
pdfr.a 2865 pdfr.a 70..2819 165..2914 13750 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2469905..2470800 2018..2913 4480 100 Plus
chrX 22417052 chrX 2466754..2467212 318..776 2250 99.3 Plus
chrX 22417052 chrX 2447915..2448229 4..318 1575 100 Plus
chrX 22417052 chrX 2468980..2469277 1296..1593 1460 99.3 Plus
chrX 22417052 chrX 2469343..2469609 1593..1859 1335 100 Plus
chrX 22417052 chrX 2468648..2468905 1039..1296 1230 98.4 Plus
chrX 22417052 chrX 2469681..2469843 1856..2018 815 100 Plus
chrX 22417052 chrX 2468256..2468408 887..1039 750 99.3 Plus
chrX 22417052 chrX 2467287..2467399 774..886 565 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:32:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2576116..2577012 2018..2914 4485 100 Plus
X 23542271 X 2572973..2573431 318..776 2295 100 Plus
X 23542271 X 2554103..2554417 4..318 1575 100 Plus
X 23542271 X 2575191..2575488 1296..1593 1490 100 Plus
X 23542271 X 2575554..2575820 1593..1859 1335 100 Plus
X 23542271 X 2574863..2575120 1039..1296 1290 100 Plus
X 23542271 X 2575892..2576054 1856..2018 815 100 Plus
X 23542271 X 2574472..2574624 887..1039 765 100 Plus
X 23542271 X 2573498..2573610 774..886 565 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2584214..2585110 2018..2914 4485 100 Plus
X 23527363 X 2581071..2581529 318..776 2295 100 Plus
X 23527363 X 2562201..2562515 4..318 1575 100 Plus
X 23527363 X 2583289..2583586 1296..1593 1490 100 Plus
X 23527363 X 2583652..2583918 1593..1859 1335 100 Plus
X 23527363 X 2582961..2583218 1039..1296 1290 100 Plus
X 23527363 X 2583990..2584152 1856..2018 815 100 Plus
X 23527363 X 2582570..2582722 887..1039 765 100 Plus
X 23527363 X 2581596..2581708 774..886 565 100 Plus
Blast to na_te.dros performed 2019-03-15 16:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 960..1094 181..322 136 58.7 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 822..866 264..307 123 77.8 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 6440..6488 2672..2624 119 71.4 Minus

RH51443.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:48:06 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2447913..2448079 1..168 98 == Plus
chrX 2448132..2448229 221..318 100 -> Plus
chrX 2466755..2467211 319..775 99 -> Plus
chrX 2467289..2467399 776..886 100 -> Plus
chrX 2468256..2468407 887..1038 99 -> Plus
chrX 2468648..2468905 1039..1296 98 -> Plus
chrX 2468981..2469277 1297..1593 99 -> Plus
chrX 2469344..2469607 1594..1857 100 -> Plus
chrX 2469683..2469843 1858..2018 100 -> Plus
chrX 2469906..2470800 2019..2913 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:57:52 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
pdfr-RA 1..2010 346..2355 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:05:30 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
pdfr-RA 1..2010 346..2355 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:09:32 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
Pdfr-RB 180..2217 318..2355 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:50:34 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
CG13758-RA 1..2010 346..2355 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:48:42 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
Pdfr-RB 180..2217 318..2355 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:57:51 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
pdfr-RA 3..2354 4..2355 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:05:30 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
pdfr-RA 1..2910 4..2913 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:32 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
Pdfr-RA 1..2910 4..2913 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:50:35 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
CG13758-RA 3..2354 4..2355 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:48:42 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
Pdfr-RA 1..2910 4..2913 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:06 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
X 2575894..2576054 1858..2018 100 -> Plus
X 2554101..2554417 1..318 99 -> Plus
X 2572974..2573430 319..775 100 -> Plus
X 2573500..2573610 776..886 100 -> Plus
X 2574472..2574623 887..1038 100 -> Plus
X 2574863..2575120 1039..1296 100 -> Plus
X 2575192..2575488 1297..1593 100 -> Plus
X 2575555..2575818 1594..1857 100 -> Plus
X 2576117..2577011 2019..2913 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:06 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
X 2575894..2576054 1858..2018 100 -> Plus
X 2554101..2554417 1..318 99 -> Plus
X 2572974..2573430 319..775 100 -> Plus
X 2573500..2573610 776..886 100 -> Plus
X 2574472..2574623 887..1038 100 -> Plus
X 2574863..2575120 1039..1296 100 -> Plus
X 2575192..2575488 1297..1593 100 -> Plus
X 2575555..2575818 1594..1857 100 -> Plus
X 2576117..2577011 2019..2913 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:06 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
X 2575894..2576054 1858..2018 100 -> Plus
X 2554101..2554417 1..318 99 -> Plus
X 2572974..2573430 319..775 100 -> Plus
X 2573500..2573610 776..886 100 -> Plus
X 2574472..2574623 887..1038 100 -> Plus
X 2574863..2575120 1039..1296 100 -> Plus
X 2575192..2575488 1297..1593 100 -> Plus
X 2575555..2575818 1594..1857 100 -> Plus
X 2576117..2577011 2019..2913 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:32 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2468896..2469153 1039..1296 100 -> Plus
arm_X 2469225..2469521 1297..1593 100 -> Plus
arm_X 2448134..2448450 1..318 99 -> Plus
arm_X 2467007..2467463 319..775 100 -> Plus
arm_X 2467533..2467643 776..886 100 -> Plus
arm_X 2468505..2468656 887..1038 100 -> Plus
arm_X 2469588..2469851 1594..1857 100 -> Plus
arm_X 2469927..2470087 1858..2018 100 -> Plus
arm_X 2470150..2471044 2019..2913 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:25:19 Download gff for RH51443.complete
Subject Subject Range Query Range Percent Splice Strand
X 2562199..2562515 1..318 99 -> Plus
X 2581072..2581528 319..775 100 -> Plus
X 2581598..2581708 776..886 100 -> Plus
X 2582570..2582721 887..1038 100 -> Plus
X 2582961..2583218 1039..1296 100 -> Plus
X 2583290..2583586 1297..1593 100 -> Plus
X 2583653..2583916 1594..1857 100 -> Plus
X 2583992..2584152 1858..2018 100 -> Plus
X 2584215..2585109 2019..2913 100   Plus

RH51443.pep Sequence

Translation from 345 to 2354

> RH51443.pep
MTLLSNILDCGGCISAQRFTRLLRQSGSSGPSPSAPTAGTFESKSMLEPT
SSHSLATGRVPLLHDFDASTTESPGTYVLDGVARVAQLALEPTVMDALPD
SDTEQVLGNLNSSAPWNLTLASAAATNFENCSALFVNYTLPQTGLYCNWT
WDTLLCWPPTPAGVLARMNCPGGFHGVDTRKFAIRKCELDGRWGSRPNAT
EVNPPGWTDYGPCYKPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCL
SLFALIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYLDQFRR
GNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGLYLHNMV
TVAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNL
TPYYWILEGPRLAVILLNFCFLVNIIRVLVMKLRQSQASDIEQTRKAVRA
AIVLLPLLGITNLLHQLAPLKTATNFAVWSYGTHFLTSFQGFFIALIYCF
LNGEVRAVLLKSLATQLSVRGHPEWAPKRASMYSGAYNTAPDTDAVQPAG
DPSATGKRISPPNKRLNGRKPSSASIVMIHEPQQRQRLMPRLQNKAREKG
KDRVEKTDAEAEPDPTISHIHSKEAGSARSRTRGSKWIMGICFRGQKVLR
VPSASSVPPESVVFELSEQ*

RH51443.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22215-PA 820 GF22215-PA 1..599 1..603 2620 82.9 Plus
Dana\GF22215-PA 820 GF22215-PA 642..820 505..669 614 72.8 Plus
Dana\GF12517-PA 504 GF12517-PA 111..451 145..509 434 32.7 Plus
Dana\GF13503-PA 507 GF13503-PA 54..442 146..560 422 29.3 Plus
Dana\GF20881-PA 472 GF20881-PA 118..433 145..505 282 26.6 Plus
Dana\GF11195-PA 562 GF11195-PA 53..395 140..507 280 27.1 Plus
Dana\GF22215-PA 820 GF22215-PA 602..642 137..177 206 80.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12935-PA 671 GG12935-PA 1..671 1..669 3473 96.7 Plus
Dere\GG20454-PA 501 GG20454-PA 49..479 146..601 419 27.8 Plus
Dere\GG20309-PA 475 GG20309-PA 82..422 145..509 402 30.9 Plus
Dere\GG19529-PA 486 GG19529-PA 118..447 145..505 323 28.7 Plus
Dere\GG22503-PA 460 GG22503-PA 88..420 150..507 263 27.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11972-PA 679 GH11972-PA 138..678 123..668 2105 73.5 Plus
Dgri\GH19746-PA 511 GH19746-PA 60..470 146..587 426 28.4 Plus
Dgri\GH21316-PA 512 GH21316-PA 95..441 139..509 418 30.1 Plus
Dgri\GH20277-PA 559 GH20277-PA 43..381 144..507 320 29.6 Plus
Dgri\GH24552-PA 490 GH24552-PA 122..410 145..464 307 30.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
Pdfr-PB 738 CG13758-PB 70..738 1..669 3513 100 Plus
Pdfr-PA 669 CG13758-PA 1..669 1..669 3513 100 Plus
Pdfr-PD 724 CG13758-PD 1..647 1..647 3409 100 Plus
Pdfr-PC 724 CG13758-PC 1..647 1..647 3409 100 Plus
Dh44-R1-PA 504 CG8422-PA 52..440 146..560 422 29.2 Plus
Dh44-R2-PA 475 CG12370-PA 82..422 145..509 406 31.1 Plus
Dh44-R2-PB 476 CG12370-PB 82..422 145..509 406 31.1 Plus
hec-PB 486 CG4395-PB 118..447 145..505 396 28.5 Plus
hec-PA 486 CG4395-PA 118..447 145..505 396 28.5 Plus
Dh31-R-PB 431 CG32843-PB 63..403 142..507 383 28 Plus
Dh31-R-PA 443 CG32843-PA 63..403 142..507 383 28 Plus
Dh31-R-PC 604 CG32843-PC 63..403 142..507 383 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14713-PA 680 GI14713-PA 126..680 116..669 2084 72.2 Plus
Dmoj\GI19749-PA 497 GI19749-PA 86..426 145..509 424 32.2 Plus
Dmoj\GI20281-PA 528 GI20281-PA 75..467 146..560 408 28.7 Plus
Dmoj\GI16272-PA 490 GI16272-PA 114..451 137..505 385 29.7 Plus
Dmoj\GI19445-PA 578 GI19445-PA 46..396 131..507 323 29.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14178-PA 591 GL14178-PA 231..591 325..669 1389 76.2 Plus
Dper\GL12858-PA 130 GL12858-PA 9..104 206..301 410 85.4 Plus
Dper\GL10691-PA 517 GL10691-PA 106..455 183..560 333 28.6 Plus
Dper\GL14178-PA 591 GL14178-PA 9..203 9..180 317 40.7 Plus
Dper\GL11103-PA 568 GL11103-PA 58..403 141..507 280 28.2 Plus
Dper\GL10114-PA 919 GL10114-PA 600..780 145..354 226 30.4 Plus
Dper\GL10114-PA 919 GL10114-PA 757..860 398..509 163 38.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12508-PA 685 GA12508-PA 9..685 9..669 2266 68.6 Plus
Dpse\GA11587-PA 478 GA11587-PA 85..425 145..509 424 31.1 Plus
Dpse\GA11587-PB 484 GA11587-PB 85..430 145..509 409 31 Plus
Dpse\GA21067-PA 506 GA21067-PA 56..444 146..560 398 29.2 Plus
Dpse\GA18155-PA 496 GA18155-PA 120..457 143..505 386 29.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19228-PA 496 GM19228-PA 29..495 181..647 2487 98.3 Plus
Dsec\GM23511-PA 377 GM23511-PA 36..266 1..231 1221 96.5 Plus
Dsec\GM23511-PA 377 GM23511-PA 271..377 563..669 547 97.2 Plus
Dsec\GM21397-PA 493 GM21397-PA 82..422 145..509 399 30.9 Plus
Dsec\GM21541-PA 496 GM21541-PA 52..399 146..520 378 30.1 Plus
Dsec\GM11523-PA 486 GM11523-PA 115..447 142..505 321 28.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10893-PA 493 GD10893-PA 82..422 145..509 400 30.9 Plus
Dsim\GD11050-PA 504 GD11050-PA 52..482 146..601 391 27.8 Plus
Dsim\GD25770-PA 395 GD25770-PA 40..355 162..507 218 27.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16778-PA 604 GJ16778-PA 50..604 116..669 2207 73.7 Plus
Dvir\GJ22009-PA 517 GJ22009-PA 19..477 85..587 434 28.5 Plus
Dvir\GJ18092-PA 543 GJ18092-PA 168..508 145..509 423 32.2 Plus
Dvir\GJ16914-PA 467 GJ16914-PA 117..428 145..505 338 29 Plus
Dvir\GJ21197-PA 620 GJ21197-PA 47..393 136..507 316 30.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:31:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10242-PA 863 GK10242-PA 304..863 129..669 2241 77.9 Plus
Dwil\GK17974-PA 490 GK17974-PA 95..437 140..509 428 31.8 Plus
Dwil\GK21476-PA 522 GK21476-PA 71..458 146..560 406 28.4 Plus
Dwil\GK25280-PA 475 GK25280-PA 63..453 100..518 366 29.4 Plus
Dwil\GK17827-PA 428 GK17827-PA 52..388 146..507 277 27.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:31:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16259-PA 551 GE16259-PA 1..550 1..546 2826 96.5 Plus
Dyak\GE12470-PA 475 GE12470-PA 82..422 145..509 402 30.9 Plus
Dyak\GE13585-PA 504 GE13585-PA 52..482 146..601 388 28 Plus
Dyak\GE16188-PA 484 GE16188-PA 113..445 142..505 322 28.2 Plus
Dyak\GE13373-PA 456 GE13373-PA 80..416 146..507 264 27.8 Plus

RH51443.hyp Sequence

Translation from 345 to 2354

> RH51443.hyp
MTLLSNILDCGGCISAQRFTRLLRQSGSSGPSPSAPTAGTFESKSMLEPT
SSHSLATGRVPLLHDFDASTTESPGTYVLDGVARVAQLALEPTVMDALPD
SDTEQVLGNLNSSAPWNLTLASAAATNFENCSALFVNYTLPQTGLYCNWT
WDTLLCWPPTPAGVLARMNCPGGFHGVDTRKFAIRKCELDGRWGSRPNAT
EVNPPGWTDYGPCYKPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCL
SLFALIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYLDQFRR
GNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGLYLHNMV
TVAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNL
TPYYWILEGPRLAVILLNFCFLVNIIRVLVMKLRQSQASDIEQTRKAVRA
AIVLLPLLGITNLLHQLAPLKTATNFAVWSYGTHFLTSFQGFFIALIYCF
LNGEVRAVLLKSLATQLSVRGHPEWAPKRASMYSGAYNTAPDTDAVQPAG
DPSATGKRISPPNKRLNGRKPSSASIVMIHEPQQRQRLMPRLQNKAREKG
KDRVEKTDAEAEPDPTISHIHSKEAGSARSRTRGSKWIMGICFRGQKVLR
VPSASSVPPESVVFELSEQ*

RH51443.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
Pdfr-PB 738 CG13758-PB 70..738 1..669 3513 100 Plus
Pdfr-PA 669 CG13758-PA 1..669 1..669 3513 100 Plus
Pdfr-PD 724 CG13758-PD 1..647 1..647 3409 100 Plus
Pdfr-PC 724 CG13758-PC 1..647 1..647 3409 100 Plus
Dh44-R1-PA 504 CG8422-PA 52..440 146..560 422 29.2 Plus