BDGP Sequence Production Resources |
Search the DGRC for RH51452
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 514 |
Well: | 52 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9350-RA |
Protein status: | RH51452.pep: gold |
Preliminary Size: | 641 |
Sequenced Size: | 726 |
Gene | Date | Evidence |
---|---|---|
CG9350 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9350 | 2002-01-09 | Blastp of sequenced clone |
CG9350 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9350 | 2008-04-29 | Release 5.5 accounting |
CG9350 | 2008-08-15 | Release 5.9 accounting |
CG9350 | 2008-12-18 | 5.12 accounting |
726 bp (726 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075551
> RH51452.complete GTCCTTCTGCTCGTGTGTATACACTGGCGAACAGCTGTTTTTTGTCAATC TCCGCCACAATAATTACGTAAATTTCGGCAGCAAACCATGTCGCTGCTCC GTTCGAAATACTACGACCATCCCGATGGCGAGGATGCCTTTGGCAAGATC GTGGCCACCAACAAGTACGCGGTATCCGCCGGCGTGGCCTGGTCCATGTT CGACGTCCTGACGCTCTCCAAGCCGCAAGGATATCTGCCCACACTGGGCC GTTTCGCCTACAACACGGGTCCGCTGATGGGCATGGCCACGGCGTTCACT CTGACCACCCTGGTGGCCACAAATGCGCGCGGCAAGGACGATAAAATCAA CTACCTGATCGGCGGTTTTGCGGCTGGCGGCGTCTTTGGAGCCTGGAAAC ACAACCACGTAGCTGGTCTGTGCGCCGGCCTCTTCCTGGGCATCGCTGGT GTCATCAAGAAGATGTCCATTGAACAGGGCTGGGAGTTCTTCCCAAACAC ACCGATCAAGCAGTATGGTGGTCTGAACATTGCCGGAAACGACTGGACCA TCATGGCCGATCCTCCCAAGAACTGGACCACGGAAAAGCCAAAGGAGTAA AGAAGGCGTAAAGTCTAGTTTCCTATGTTTAGTTTAATGGTGATTCGATG AGAGAAAGATTCGGCACTAACCGCTTGCCTTGCAACCGAATAAAAGCCAA GTCAGAAGTGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9350-RA | 922 | CG9350-RA | 23..732 | 2..711 | 3550 | 100 | Plus |
CG9350.b | 2430 | CG9350.b | 23..732 | 2..711 | 3550 | 100 | Plus |
CG9350.a | 698 | CG9350.a | 70..698 | 82..710 | 3145 | 100 | Plus |
CG9350.a | 698 | CG9350.a | 4..69 | 2..67 | 330 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16912246..16912517 | 439..710 | 1360 | 100 | Plus |
chr2R | 21145070 | chr2R | 16911770..16912034 | 80..344 | 1325 | 100 | Plus |
chr2R | 21145070 | chr2R | 16912092..16912187 | 345..440 | 480 | 100 | Plus |
chr2R | 21145070 | chr2R | 16911512..16911591 | 2..81 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21025815..21026087 | 439..711 | 1365 | 100 | Plus |
2R | 25286936 | 2R | 21025339..21025603 | 80..344 | 1325 | 100 | Plus |
2R | 25286936 | 2R | 21025661..21025756 | 345..440 | 480 | 100 | Plus |
2R | 25286936 | 2R | 21025081..21025160 | 2..81 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21027014..21027286 | 439..711 | 1365 | 100 | Plus |
2R | 25260384 | 2R | 21026538..21026802 | 80..344 | 1325 | 100 | Plus |
2R | 25260384 | 2R | 21026860..21026955 | 345..440 | 480 | 100 | Plus |
2R | 25260384 | 2R | 21026280..21026359 | 2..81 | 400 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16911511..16911591 | 1..81 | 98 | -> | Plus |
chr2R | 16911772..16912034 | 82..344 | 100 | -> | Plus |
chr2R | 16912092..16912186 | 345..439 | 100 | -> | Plus |
chr2R | 16912247..16912517 | 440..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..513 | 88..600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..513 | 88..600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..513 | 88..600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..513 | 88..600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..513 | 88..600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..710 | 2..710 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..710 | 2..710 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 3..712 | 1..710 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 1..710 | 2..710 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9350-RA | 3..712 | 1..710 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21025080..21025160 | 1..81 | 98 | -> | Plus |
2R | 21025341..21025603 | 82..344 | 100 | -> | Plus |
2R | 21025661..21025755 | 345..439 | 100 | -> | Plus |
2R | 21025816..21026086 | 440..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21025080..21025160 | 1..81 | 98 | -> | Plus |
2R | 21025341..21025603 | 82..344 | 100 | -> | Plus |
2R | 21025661..21025755 | 345..439 | 100 | -> | Plus |
2R | 21025816..21026086 | 440..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21025080..21025160 | 1..81 | 98 | -> | Plus |
2R | 21025341..21025603 | 82..344 | 100 | -> | Plus |
2R | 21025661..21025755 | 345..439 | 100 | -> | Plus |
2R | 21025816..21026086 | 440..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16912585..16912665 | 1..81 | 98 | -> | Plus |
arm_2R | 16913166..16913260 | 345..439 | 100 | -> | Plus |
arm_2R | 16912846..16913108 | 82..344 | 100 | -> | Plus |
arm_2R | 16913321..16913591 | 440..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21026540..21026802 | 82..344 | 100 | -> | Plus |
2R | 21026860..21026954 | 345..439 | 100 | -> | Plus |
2R | 21027015..21027285 | 440..710 | 100 | Plus | |
2R | 21026279..21026359 | 1..81 | 98 | -> | Plus |
Translation from 87 to 599
> RH51452.pep MSLLRSKYYDHPDGEDAFGKIVATNKYAVSAGVAWSMFDVLTLSKPQGYL PTLGRFAYNTGPLMGMATAFTLTTLVATNARGKDDKINYLIGGFAAGGVF GAWKHNHVAGLCAGLFLGIAGVIKKMSIEQGWEFFPNTPIKQYGGLNIAG NDWTIMADPPKNWTTEKPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11926-PA | 174 | GF11926-PA | 1..170 | 1..170 | 705 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22078-PA | 170 | GG22078-PA | 1..170 | 1..170 | 795 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20525-PA | 167 | GH20525-PA | 1..167 | 1..167 | 714 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-B14.7-PA | 170 | CG9350-PA | 1..170 | 1..170 | 917 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18971-PA | 171 | GI18971-PA | 1..170 | 1..170 | 708 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10144-PA | 169 | GL10144-PA | 1..167 | 1..167 | 791 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21720-PA | 169 | GA21720-PA | 1..167 | 1..167 | 742 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15797-PA | 170 | GM15797-PA | 1..170 | 1..170 | 806 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11557-PA | 170 | GD11557-PA | 1..170 | 1..170 | 803 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21995-PA | 168 | GJ21995-PA | 1..167 | 1..167 | 727 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23263-PA | 171 | GK23263-PA | 1..170 | 1..170 | 717 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12159-PA | 170 | GE12159-PA | 1..170 | 1..170 | 796 | 94.7 | Plus |
Translation from 87 to 599
> RH51452.hyp MSLLRSKYYDHPDGEDAFGKIVATNKYAVSAGVAWSMFDVLTLSKPQGYL PTLGRFAYNTGPLMGMATAFTLTTLVATNARGKDDKINYLIGGFAAGGVF GAWKHNHVAGLCAGLFLGIAGVIKKMSIEQGWEFFPNTPIKQYGGLNIAG NDWTIMADPPKNWTTEKPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9350-PA | 170 | CG9350-PA | 1..170 | 1..170 | 917 | 100 | Plus |