BDGP Sequence Production Resources |
Search the DGRC for RH54514
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 545 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Adh-RC |
Protein status: | RH54514.pep: gold |
Sequenced Size: | 1247 |
Gene | Date | Evidence |
---|---|---|
CG32954 | 2004-03-31 | Blastp of sequenced clone |
Adh | 2008-04-29 | Release 5.5 accounting |
Adh | 2008-08-15 | Release 5.9 accounting |
Adhr | 2008-08-15 | Release 5.9 accounting |
Adh | 2008-12-18 | 5.12 accounting |
Adhr | 2008-12-18 | 5.12 accounting |
1247 bp (1247 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012435
> RH54514.complete GATTATTGTCTCAGTGCAGTTGTCAGTTGCAGTTCAGCAGACGGGCTAAC GAGTACTTGCATCTCTTCAAATTTACTTAATTGATCAAGCAGCGCTGCCG TCGCCGGCTGAGCAGCCTGCGTACATAGCCGAGATCGCGTAACGGTAGAT AATGAAAAGCTCTACGTAACCGAAGCTTCTGCTGTACGGATCTTCCTATA AATACGGGGCCGACACGAACTGGAAACCAACAACTAACGGAGCCCTCTTC CAATTGAAACAGATCGAAAGAGCCTGCTAAAGCAAAAAAGAAGTCACCAT GTCGTTTACTTTGACCAACAAGAACGTGATTTTCGTTGCCGGTCTGGGAG GCATTGGTCTGGACACCAGCAAGGAGCTGCTCAAGCGCGATCTGAAGAAC CTGGTGATCCTCGACCGCATTGAGAACCCGGCTGCCATTGCCGAGCTGAA GGCAATCAATCCAAAGGTGACCGTCACCTTCTACCCCTATGATGTGACCG TGCCCATTGCCGAGACCACCAAGCTGCTGAAGACCATCTTCGCCCAGCTG AAGACCGTCGATGTCCTGATCAACGGAGCTGGTATCCTGGACGATCACCA GATCGAGCGCACCATTGCCGTCAACTACACTGGCCTGGTCAACACCACGA CGGCCATTCTGGACTTCTGGGACAAGCGCAAGGGCGGTCCCGGTGGTATC ATCTGCAACATTGGATCCGTCACTGGATTCAATGCCATCTACCAGGTGCC CGTCTACTCCGGCACCAAGGCCGCCGTGGTCAACTTCACCAGCTCCCTGG CGAAACTGGCCCCCATTACCGGCGTGACGGCTTACACTGTGAACCCCGGC ATCACCCGCACCACCCTGGTGCACACGTTCAACTCCTGGTTGGATGTTGA GCCTCAGGTTGCCGAGAAGCTCCTGGCTCATCCCACCCAGCCCTCGTTGG CCTGCGCCGAGAACTTCGTCAAGGCTATCGAGCTGAACCAGAACGGAGCC ATCTGGAAACTGGACTTGGGCACCCTGGAGGCCATCCAGTGGACCAAGCA CTGGGACTCCGGCATCTAAGAAGTGATACTCCCAAAAAAAAAAAAAAAAC ATAACATTAGTTCATAGGGTTCTGCGAACCAGAAGATATTCACGCAAGGC AATAAGGCTGATTCGATGCACACTCACATTCTTCTCCTAATACGATAATA AAACTTTCCATGAAAAATATGGAAAAATAAAGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adh-RI | 1245 | Adh-RI | 3..1229 | 2..1229 | 6100 | 99.9 | Plus |
Adh-RC | 1071 | Adh-RC | 90..1055 | 263..1229 | 4795 | 99.8 | Plus |
Adhr-RA | 2077 | Adhr-RA | 90..1055 | 263..1229 | 4795 | 99.8 | Plus |
Adh-RC | 1071 | Adh-RC | 3..89 | 2..88 | 435 | 100 | Plus |
Adhr-RA | 2077 | Adhr-RA | 3..89 | 2..88 | 435 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 14615639..14616065 | 802..1229 | 2090 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 14615163..14615569 | 396..802 | 2035 | 100 | Plus |
chr2L | 23010047 | chr2L | 14614791..14615099 | 89..397 | 1545 | 100 | Plus |
chr2L | 23010047 | chr2L | 14614219..14614306 | 2..89 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14616977..14617403 | 802..1229 | 2090 | 99.8 | Plus |
2L | 23513712 | 2L | 14616501..14616907 | 396..802 | 2035 | 100 | Plus |
2L | 23513712 | 2L | 14616129..14616437 | 89..397 | 1545 | 100 | Plus |
2L | 23513712 | 2L | 14615557..14615644 | 2..89 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14616977..14617403 | 802..1229 | 2100 | 99.7 | Plus |
2L | 23513712 | 2L | 14616501..14616907 | 396..802 | 2035 | 100 | Plus |
2L | 23513712 | 2L | 14616129..14616437 | 89..397 | 1545 | 100 | Plus |
2L | 23513712 | 2L | 14615557..14615644 | 2..89 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy7 | 5486 | gypsy7 GYPSY7 5486bp | 1687..1719 | 277..309 | 111 | 81.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 14614217..14614305 | 1..88 | 98 | -> | Plus |
chr2L | 14614791..14615099 | 89..397 | 100 | -> | Plus |
chr2L | 14615165..14615569 | 398..802 | 100 | -> | Plus |
chr2L | 14615640..14616067 | 803..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RH | 1..771 | 299..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RH | 1..771 | 299..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RH | 1..771 | 299..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RH | 1..771 | 299..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RH | 1..771 | 299..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RI | 1..1231 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RI | 1..1231 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RI | 4..1234 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RI | 1..1231 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adh-RI | 4..1231 | 1..1228 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14615555..14615643 | 1..88 | 98 | -> | Plus |
2L | 14616129..14616437 | 89..397 | 100 | -> | Plus |
2L | 14616503..14616907 | 398..802 | 100 | -> | Plus |
2L | 14616978..14617405 | 803..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14615555..14615643 | 1..88 | 98 | -> | Plus |
2L | 14616129..14616437 | 89..397 | 100 | -> | Plus |
2L | 14616503..14616907 | 398..802 | 100 | -> | Plus |
2L | 14616978..14617405 | 803..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14615555..14615643 | 1..88 | 98 | -> | Plus |
2L | 14616129..14616437 | 89..397 | 100 | -> | Plus |
2L | 14616503..14616907 | 398..802 | 100 | -> | Plus |
2L | 14616978..14617405 | 803..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 14615555..14615643 | 1..88 | 98 | -> | Plus |
arm_2L | 14616129..14616437 | 89..397 | 100 | -> | Plus |
arm_2L | 14616503..14616907 | 398..802 | 100 | -> | Plus |
arm_2L | 14616978..14617405 | 803..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14616129..14616437 | 89..397 | 100 | -> | Plus |
2L | 14616503..14616907 | 398..802 | 100 | -> | Plus |
2L | 14616978..14617405 | 803..1232 | 99 | Plus | |
2L | 14615555..14615643 | 1..88 | 98 | -> | Plus |
Translation from 298 to 1068
> RH54514.pep MSFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAEL KAINPKVTVTFYPYDVTVPIAETTKLLKTIFAQLKTVDVLINGAGILDDH QIERTIAVNYTGLVNTTTAILDFWDKRKGGPGGIICNIGSVTGFNAIYQV PVYSGTKAAVVNFTSSLAKLAPITGVTAYTVNPGITRTTLVHTFNSWLDV EPQVAEKLLAHPTQPSLACAENFVKAIELNQNGAIWKLDLGTLEAIQWTK HWDSGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Adh-PA | 256 | GF14888-PA | 1..256 | 1..256 | 1237 | 91.8 | Plus |
Dana\GF12913-PA | 372 | GF12913-PA | 124..372 | 8..256 | 1003 | 77.9 | Plus |
Dana\Adhr-PA | 272 | GF14889-PA | 2..253 | 3..252 | 444 | 36.9 | Plus |
Dana\GF10118-PA | 259 | GF10118-PA | 3..253 | 5..252 | 382 | 35.4 | Plus |
Dana\GF24389-PA | 261 | GF24389-PA | 1..254 | 1..252 | 310 | 30.9 | Plus |
Dana\GF12913-PA | 372 | GF12913-PA | 16..67 | 2..53 | 162 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\Adh-PA | 256 | GG25120-PA | 1..256 | 1..256 | 1285 | 95.7 | Plus |
Dere\Adhr-PA | 272 | GG25121-PA | 2..253 | 3..252 | 464 | 38.5 | Plus |
Dere\GG16001-PA | 259 | GG16001-PA | 3..253 | 5..252 | 348 | 34.7 | Plus |
Dere\GG25347-PA | 256 | GG25347-PA | 2..255 | 3..253 | 334 | 28.9 | Plus |
Dere\GG13462-PA | 261 | GG13462-PA | 1..254 | 1..252 | 312 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\Adh-PA | 254 | GH13025-PA | 1..254 | 3..256 | 1080 | 78.3 | Plus |
Dgri\GH13846-PA | 249 | GH13846-PA | 2..246 | 5..249 | 809 | 60.8 | Plus |
Dgri\GH13026-PA | 239 | GH13026-PA | 1..239 | 21..256 | 767 | 60.3 | Plus |
Dgri\GH13404-PA | 274 | GH13404-PA | 2..253 | 3..252 | 403 | 35 | Plus |
Dgri\GH13403-PA | 169 | GH13403-PA | 35..168 | 8..154 | 370 | 51 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adh-PE | 256 | CG3481-PE | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PF | 256 | CG3481-PF | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PH | 256 | CG3481-PH | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PI | 256 | CG3481-PI | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PC | 256 | CG3481-PC | 1..256 | 1..256 | 1316 | 100 | Plus |
Adhr-PC | 272 | CG3484-PC | 2..253 | 3..252 | 449 | 38.2 | Plus |
Adhr-PB | 272 | CG3484-PB | 2..253 | 3..252 | 449 | 38.2 | Plus |
Adhr-PA | 272 | CG3484-PA | 2..253 | 3..252 | 449 | 38.2 | Plus |
CG18814-PB | 267 | CG18814-PB | 3..255 | 5..253 | 368 | 34.4 | Plus |
CG4842-PA | 259 | CG4842-PA | 3..253 | 5..252 | 342 | 31.7 | Plus |
Fbp2-PC | 256 | CG3763-PC | 2..254 | 3..252 | 329 | 29.4 | Plus |
Fbp2-PB | 256 | CG3763-PB | 2..254 | 3..252 | 329 | 29.4 | Plus |
Fbp2-PA | 256 | CG3763-PA | 2..254 | 3..252 | 329 | 29.4 | Plus |
Pdh-PC | 261 | CG4899-PC | 1..254 | 1..252 | 312 | 30.4 | Plus |
Pdh-PA | 278 | CG4899-PA | 18..271 | 1..252 | 312 | 30.4 | Plus |
Pdh-PD | 260 | CG4899-PD | 1..253 | 1..252 | 300 | 30.4 | Plus |
Pdh-PB | 277 | CG4899-PB | 18..270 | 1..252 | 300 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\Adh2-PA | 254 | GI17643-PA | 1..254 | 3..256 | 1113 | 81.1 | Plus |
Dmoj\Adh1-PA | 254 | GI17644-PA | 1..254 | 3..256 | 1084 | 79.1 | Plus |
Dmoj\GI17642-PA | 291 | GI17642-PA | 40..291 | 5..256 | 981 | 72.6 | Plus |
Dmoj\GI10333-PA | 238 | GI10333-PA | 1..238 | 21..256 | 725 | 55 | Plus |
Dmoj\GI17645-PA | 276 | GI17645-PA | 2..253 | 3..252 | 441 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\Adh-PA | 254 | GL25993-PA | 1..254 | 3..256 | 1233 | 91.3 | Plus |
Dper\GL26015-PA | 820 | GL26015-PA | 567..820 | 3..256 | 1172 | 85 | Plus |
Dper\Adhr-PA | 267 | GL25994-PA | 2..242 | 3..252 | 415 | 35.2 | Plus |
Dper\GL17859-PA | 258 | GL17859-PA | 3..257 | 5..256 | 362 | 33.6 | Plus |
Dper\GL26147-PA | 256 | GL26147-PA | 2..255 | 3..253 | 314 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Adh-PA | 254 | GA17214-PA | 1..254 | 3..256 | 1229 | 90.9 | Plus |
Dpse\GA25238-PA | 820 | GA25238-PA | 567..820 | 3..256 | 1172 | 85 | Plus |
Dpse\GA25237-PA | 820 | GA25237-PA | 567..820 | 3..256 | 1171 | 85 | Plus |
Dpse\Adhr-PA | 278 | GA25223-PA | 2..253 | 3..252 | 446 | 37.3 | Plus |
Dpse\GA18471-PA | 258 | GA18471-PA | 3..257 | 5..256 | 366 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\Adh-PA | 256 | GM15656-PA | 1..256 | 1..256 | 1319 | 98.8 | Plus |
Dsec\Adhr-PA | 272 | GM15667-PA | 2..253 | 3..252 | 464 | 38.5 | Plus |
Dsec\GM25633-PA | 267 | GM25633-PA | 3..248 | 5..246 | 355 | 35.3 | Plus |
Dsec\GM17449-PA | 256 | GM17449-PA | 2..255 | 3..253 | 342 | 29.3 | Plus |
Dsec\GM25632-PA | 259 | GM25632-PA | 3..253 | 5..252 | 339 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Adh-PA | 256 | GD23968-PA | 1..256 | 1..256 | 1319 | 98.8 | Plus |
Dsim\Adhr-PA | 272 | GD23969-PA | 2..253 | 3..252 | 464 | 38.5 | Plus |
Dsim\Fbp2-PA | 256 | GD23602-PA | 2..255 | 3..253 | 341 | 29.3 | Plus |
Dsim\GD14635-PA | 259 | GD14635-PA | 3..253 | 5..252 | 339 | 31.7 | Plus |
Dsim\GD12481-PA | 261 | GD12481-PA | 1..254 | 1..252 | 313 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Adh1-PA | 254 | GJ18208-PA | 1..254 | 3..256 | 1104 | 80.7 | Plus |
Dvir\Adh2-PA | 254 | GJ18209-PA | 1..254 | 3..256 | 1104 | 80.7 | Plus |
Dvir\Adhr-PA | 275 | GJ18210-PA | 2..253 | 3..252 | 438 | 36.5 | Plus |
Dvir\GJ12792-PA | 259 | GJ12792-PA | 3..253 | 5..252 | 378 | 35.3 | Plus |
Dvir\GJ12626-PA | 261 | GJ12626-PA | 1..254 | 1..252 | 311 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\Adh-PA | 254 | GK18290-PA | 3..254 | 5..256 | 1195 | 88.9 | Plus |
Dwil\GK14700-PA | 254 | GK14700-PA | 3..254 | 5..256 | 976 | 70.2 | Plus |
Dwil\GK14701-PA | 254 | GK14701-PA | 3..254 | 5..256 | 939 | 68.3 | Plus |
Dwil\GK18292-PA | 273 | GK18292-PA | 2..253 | 3..252 | 447 | 36.9 | Plus |
Dwil\GK14485-PA | 260 | GK14485-PA | 3..254 | 5..252 | 335 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Adh-PA | 256 | GE19037-PA | 1..256 | 1..256 | 1313 | 97.3 | Plus |
Dyak\jgw-PA | 323 | GE10683-PA | 69..323 | 2..256 | 1236 | 91 | Plus |
Dyak\Adhr-PA | 272 | GE19038-PA | 2..253 | 3..252 | 465 | 38.9 | Plus |
Dyak\GE23095-PA | 260 | GE23095-PA | 3..255 | 5..253 | 360 | 34.4 | Plus |
Dyak\GE23092-PA | 259 | GE23092-PA | 3..253 | 5..252 | 358 | 33.6 | Plus |
Translation from 298 to 1068
> RH54514.hyp MSFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAEL KAINPKVTVTFYPYDVTVPIAETTKLLKTIFAQLKTVDVLINGAGILDDH QIERTIAVNYTGLVNTTTAILDFWDKRKGGPGGIICNIGSVTGFNAIYQV PVYSGTKAAVVNFTSSLAKLAPITGVTAYTVNPGITRTTLVHTFNSWLDV EPQVAEKLLAHPTQPSLACAENFVKAIELNQNGAIWKLDLGTLEAIQWTK HWDSGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adh-PE | 256 | CG3481-PE | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PF | 256 | CG3481-PF | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PH | 256 | CG3481-PH | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PI | 256 | CG3481-PI | 1..256 | 1..256 | 1316 | 100 | Plus |
Adh-PC | 256 | CG3481-PC | 1..256 | 1..256 | 1316 | 100 | Plus |