Clone RH55021 Report

Search the DGRC for RH55021

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:550
Well:21
Vector:pFlc-1
Associated Gene/TranscriptCG12344-RA
Protein status:RH55021.pep: gold
Sequenced Size:2861

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12344 2002-01-01 Sim4 clustering to Release 2
CG12344 2002-03-20 Blastp of sequenced clone
CG12344 2003-01-01 Sim4 clustering to Release 3
CG12344 2008-04-29 Release 5.5 accounting
CG12344 2008-08-15 Release 5.9 accounting
CG12344 2008-12-18 5.12 accounting

Clone Sequence Records

RH55021.complete Sequence

2861 bp (2861 high quality bases) assembled on 2002-03-20

GenBank Submission: AY094938

> RH55021.complete
GATTCGAGTTCCGAACGGCAGCCGGATCGGAGGGTAAACCTTGCGGATTA
AGTTAGCCCCAACCAGGACCCCATATATATATATATATATATCTTTTGTT
CAGTGTTTGTGTCGTGCAAAAAAAGAAAATAAGAAACAGCCAGAGAGCCA
AATAAATCCAAAATCAAAACAAAATAAACCGAATTATGATATTCCCACGT
CGGTGTAAAGTGAGATGATTTGAGGTCTGTGTGTTACAAATCCTTTCCCG
TGCCGTCGCCCCAACATCATGCTCGACAAATTCAACACAAACGCATTCAT
ATCGTTTGGACTGGGATTCATACTGATGTGGCTGAGCGAAGCCACGGAAG
CCCACATGAACTACACAGCCAAGCCGCGAGTAGTTCTTCCGCCTAATTAT
GTCAAGGAAATACGACCGCCCTCGAAGAAGGGCTCACCAGTGATAGTAGA
CTTTAGCATATTCGTTGTAGATATTAACTCAATTAACGTAGAGGATATGG
ACTTTAGAGTAGACATGTTTATACATCAGCGCTGGCTGGAGTCGCGTCTG
GAGATCCCAGATGACATATTCGAGGAGGGCGACGACTACGTGACGCTGCT
TCCAGAGGTCTTTGAGAATTTTTGGCAGCCGGATCCGTACTTTCTTAATT
CCAAAATTGCCGAAATAGCGACACTGACCCACAAGTTCACGTCGGTGACG
CTCTACAAGAACAAAACGGTGCGCTATGCGGCCCGGATGCATGCGATCAT
CGCCTGCCAGATGGAGTTCCAGCTGTACCCCATGGACATCCAGGTGTGTC
CCATCTACATCGAGAGCTTCTCGTCGAACAATCAAAAGGTTAAGCTGCGC
TGGTCCGACTCCGGGGTGACCCTCAATCCGGAACTGAAGCTGCTGCAGTA
CAATCTGGGCCAGCCGCTGGAACTGGAGGAGAGCGACGGCTACATGCCGG
AGAAGGTGGGGAACTTCTCCCGCCTCACCGTATACTTCCGCTTCGAGCGC
CAGATTGGCCACCACCTCATCCAGACCTTCGCCCCCTCATCGCTGGTGGT
GATGCTGTCCTGGTTCAGCTTCTGGCTGGGACTGGACGCCATTCCGGGGC
GCGTAACGCTACTGGTGACCTGCATGCTGACCCTGGTGACCATGTTTACG
GGCGCCGACATTCCGCCAGTGGCCTACGTTAAGGCACTGGATCTCTGGAT
GGCCGGGTGCATGCTGTCCGTGTTCGCCGCGCTGGCCGAGTTCGTGGTGG
TGAAAGTGCTGGACGTGCAGTACCAGTACCAGGTGAACCGCATACCCAAG
GTACTGCCCATGCGCATCAGCAATATGGAGAAGGGTCAGTGTGCGACGGT
GGCCAGTTGGGAGGGCGGAGCGGTGCGGTCGCGGAAGGCCACTCAGACGC
CCACGACACCGGGCCAGACATCGCTCCAGGGTAACGGCGGACCGCCGAAG
CCAGCAAGACGTCAAAGTCTACTTTCCGTGGCGTGGACGGATACGGATAC
CGGCGTGGAGAAGATCATGTGGCGAGAGATCGACAAGGTGTCCCGCGCCG
TATTCCCCATCCTGTTCTTTGTGTTTGTGCTCCTGTACTGGCCGATACTG
CTGATGAAGTCGTCCTAGGATTTGGGGAGCTCCAGACTGCATATGTCTGG
ACTCCGTTAAAAAGTCGAACAAACGCGAATATGTTGATGAAACTGCAATT
GGACTGGATTTGGATATGCAAACTTCAAGTGCAATGCCAGTGACGCTAGG
TCTTTGGATGGGAATATCTGGAAACCGAGAGCTCTATGCTGCACGTCATC
AGAGTACAAGAAACCACAAGGAAAGTCTACAGTTACCTAAATACATCCAT
CGGGTACATTGAAATGCCAGTACTGAGTGTTATGGACTACTTGCTCATAT
TGTTCATTTGAGTATATGCTTTGTACAGATCCAAACAATACCGATATTAT
TACAATACCCCAAATTATTTCAAATCTATGCCTCAATCGCAAAACAAAAC
ACGTATGTAACTCTTTCGGCAGGACACCGCGCACACCCACAGGATGGAAT
GCTTCGCTACTCAACTATATTAGCCATGATCCCACAAGGATTACCCAAAT
TTGAGTTTAGTTCTGCCTTATGCATATACATATATGTATTGTACACCGGA
TAACAAACAAACGTATATCACTGTGCTAGTGACAATACCCAGAGTCGAAA
GGGTTGTCCCTACTTTCAAAGTATACACTCTCTACAATTGCGAGCTACAC
GCATAAATCATTTTCGGGCAAACGATTTTAATTGAACTTTTGTATTAGGC
TTAAGCAAATCAGCCAAGATATGGAATTGGTGCTTTACGAAGATAATAAT
AATACAATGGCCTCAAAGGATATTTGGATTGTAAATAACGAAACGAACAG
TGAATGCTTTTAGAGATTTTTACATATTTAGAATTATTTATCCATTATAG
CGCATTTTAATGCAAACATTAGAGCTGTGGCTTTTACATCTAATACTAAA
ATCGACCTGTAGTTCAAACAGCGCACATAAGGCAGAATTTTTGAAACTAT
AAACATATATATATACATATATATATGTTAAGCTAAATCGAGTTTATATT
TGATATGGAAATACAAACACAATGTAAATACATTACATCACTACTATATA
TATTACATGCATATATTTATCTAGGATTGTAACTGCTATAAAAAGTTAAG
TTTATATAAATATCTGTATTCTTTCCATTTTTAAGTTATGTTGTTCACTC
AGCTAATCGTAGTTCAGTGAACCCTCTAACAATGTTATCGAAAAGCTTTA
AATTTATTCTTAATAAAAGACAAGGCGCGTACATCTATCAAATCGAAAAA
AAAAAAAAAAA

RH55021.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG12344-RA 2844 CG12344-RA 1..2843 2..2844 14200 99.9 Plus
CG12325-RA 3347 CG12325-RA 3080..3347 2844..2577 1340 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:29:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6714967..6716395 2844..1416 7100 99.8 Minus
chr2R 21145070 chr2R 6716918..6717283 1184..819 1830 100 Minus
chr2R 21145070 chr2R 6721626..6721799 175..2 855 99.4 Minus
chr2R 21145070 chr2R 6717342..6717498 818..662 785 100 Minus
chr2R 21145070 chr2R 6718933..6719089 662..506 785 100 Minus
chr2R 21145070 chr2R 6721370..6721525 331..176 780 100 Minus
chr2R 21145070 chr2R 6716675..6716805 1312..1182 640 99.2 Minus
chr2R 21145070 chr2R 6716492..6716597 1417..1312 530 100 Minus
chr2R 21145070 chr2R 6719169..6719269 507..407 505 100 Minus
chr2R 21145070 chr2R 6720686..6720763 407..330 390 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:33:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:29:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10827430..10828858 2844..1416 7130 99.9 Minus
2R 25286936 2R 10829381..10829746 1184..819 1830 100 Minus
2R 25286936 2R 10834063..10834236 175..2 870 100 Minus
2R 25286936 2R 10829805..10829961 818..662 785 100 Minus
2R 25286936 2R 10831378..10831534 662..506 785 100 Minus
2R 25286936 2R 10833807..10833962 331..176 780 100 Minus
2R 25286936 2R 10829138..10829268 1312..1182 655 100 Minus
2R 25286936 2R 10828955..10829060 1417..1312 530 100 Minus
2R 25286936 2R 10831614..10831714 507..407 505 100 Minus
2R 25286936 2R 10833125..10833202 407..330 390 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10828629..10830057 2844..1416 7130 99.9 Minus
2R 25260384 2R 10830580..10830945 1184..819 1830 100 Minus
2R 25260384 2R 10835262..10835435 175..2 870 100 Minus
2R 25260384 2R 10831004..10831160 818..662 785 100 Minus
2R 25260384 2R 10832577..10832733 662..506 785 100 Minus
2R 25260384 2R 10835006..10835161 331..176 780 100 Minus
2R 25260384 2R 10830337..10830467 1312..1182 655 100 Minus
2R 25260384 2R 10830154..10830259 1417..1312 530 100 Minus
2R 25260384 2R 10832813..10832913 507..407 505 100 Minus
2R 25260384 2R 10834324..10834401 407..330 390 100 Minus
Blast to na_te.dros performed 2019-03-16 04:29:16
Subject Length Description Subject Range Query Range Score Percent Strand
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 18..169 2512..2669 125 58.5 Plus
I-element 5371 I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). 5131..5212 1929..2008 117 62.2 Plus

RH55021.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:30:12 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6721371..6721525 176..330 100 <- Minus
chr2R 6721626..6721799 1..175 98   Minus
chr2R 6717342..6717497 663..818 100 <- Minus
chr2R 6718933..6719087 508..662 100 <- Minus
chr2R 6719169..6719268 408..507 100 <- Minus
chr2R 6720686..6720762 331..407 100 <- Minus
chr2R 6714966..6716393 1418..2845 99 <- Minus
chr2R 6716492..6716596 1313..1417 100 <- Minus
chr2R 6716675..6716803 1184..1312 99 <- Minus
chr2R 6716919..6717283 819..1183 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:49:47 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..1350 269..1618 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:25:45 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..1350 269..1618 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:30:56 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..1350 269..1618 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:01:05 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..1350 269..1618 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:40:46 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..1350 269..1618 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:52:18 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..2843 2..2845 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:25:45 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..2843 2..2845 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:30:56 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..2843 2..2844 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:01:05 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..2843 2..2845 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:40:46 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
CG12344-RA 1..2843 2..2844 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:30:12 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10829138..10829266 1184..1312 100 <- Minus
2R 10827429..10828856 1418..2845 99 <- Minus
2R 10828955..10829059 1313..1417 100 <- Minus
2R 10829382..10829746 819..1183 100 <- Minus
2R 10829805..10829960 663..818 100 <- Minus
2R 10831378..10831532 508..662 100 <- Minus
2R 10831614..10831713 408..507 100 <- Minus
2R 10833125..10833201 331..407 100 <- Minus
2R 10833808..10833962 176..330 100 <- Minus
2R 10834063..10834236 1..175 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:30:12 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10829138..10829266 1184..1312 100 <- Minus
2R 10827429..10828856 1418..2845 99 <- Minus
2R 10828955..10829059 1313..1417 100 <- Minus
2R 10829382..10829746 819..1183 100 <- Minus
2R 10829805..10829960 663..818 100 <- Minus
2R 10831378..10831532 508..662 100 <- Minus
2R 10831614..10831713 408..507 100 <- Minus
2R 10833125..10833201 331..407 100 <- Minus
2R 10833808..10833962 176..330 100 <- Minus
2R 10834063..10834236 1..175 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:30:12 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10829138..10829266 1184..1312 100 <- Minus
2R 10827429..10828856 1418..2845 99 <- Minus
2R 10828955..10829059 1313..1417 100 <- Minus
2R 10829382..10829746 819..1183 100 <- Minus
2R 10829805..10829960 663..818 100 <- Minus
2R 10831378..10831532 508..662 100 <- Minus
2R 10831614..10831713 408..507 100 <- Minus
2R 10833125..10833201 331..407 100 <- Minus
2R 10833808..10833962 176..330 100 <- Minus
2R 10834063..10834236 1..175 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:30:56 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6714934..6716361 1418..2845 99 <- Minus
arm_2R 6716460..6716564 1313..1417 100 <- Minus
arm_2R 6716643..6716771 1184..1312 100 <- Minus
arm_2R 6716887..6717251 819..1183 100 <- Minus
arm_2R 6717310..6717465 663..818 100 <- Minus
arm_2R 6718883..6719037 508..662 100 <- Minus
arm_2R 6719119..6719218 408..507 100 <- Minus
arm_2R 6720630..6720706 331..407 100 <- Minus
arm_2R 6721313..6721467 176..330 100 <- Minus
arm_2R 6721568..6721741 1..175 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:34:16 Download gff for RH55021.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10832577..10832731 508..662 100 <- Minus
2R 10832813..10832912 408..507 100 <- Minus
2R 10834324..10834400 331..407 100 <- Minus
2R 10835007..10835161 176..330 100 <- Minus
2R 10835262..10835435 1..175 99   Minus
2R 10828628..10830055 1418..2845 99 <- Minus
2R 10830154..10830258 1313..1417 100 <- Minus
2R 10830337..10830465 1184..1312 100 <- Minus
2R 10830581..10830945 819..1183 100 <- Minus
2R 10831004..10831159 663..818 100 <- Minus

RH55021.pep Sequence

Translation from 268 to 1617

> RH55021.pep
MLDKFNTNAFISFGLGFILMWLSEATEAHMNYTAKPRVVLPPNYVKEIRP
PSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDI
FEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKT
VRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDSGV
TLNPELKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHL
IQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGADIPP
VAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRI
SNMEKGQCATVASWEGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQS
LLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPILLMKSS*

RH55021.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11081-PA 449 GF11081-PA 1..449 1..449 2401 99.8 Plus
Dana\GF18400-PA 426 GF18400-PA 62..348 40..329 504 35.2 Plus
Dana\GF17611-PA 485 GF17611-PA 42..323 47..331 460 33.3 Plus
Dana\GF17614-PA 498 GF17614-PA 109..493 59..447 395 28 Plus
Dana\GF23583-PA 637 GF23583-PA 70..425 43..357 387 28.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22713-PA 449 GG22713-PA 1..449 1..449 2405 100 Plus
Dere\GG18454-PA 422 GG18454-PA 62..348 40..329 502 35.2 Plus
Dere\GG23438-PA 484 GG23438-PA 42..323 47..331 461 33.3 Plus
Dere\GG17931-PA 496 GG17931-PA 57..496 51..447 428 27.2 Plus
Dere\GG23471-PA 453 GG23471-PA 20..448 23..447 416 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21430-PA 451 GH21430-PA 1..451 1..449 2209 94.7 Plus
Dgri\GH17342-PA 425 GH17342-PA 64..350 40..329 502 35.2 Plus
Dgri\GH14967-PA 482 GH14967-PA 42..323 47..331 461 33.3 Plus
Dgri\GH15301-PA 456 GH15301-PA 20..451 23..447 432 28.1 Plus
Dgri\GH11877-PA 497 GH11877-PA 57..342 51..329 417 31.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG12344-PC 449 CG12344-PC 1..449 1..449 2353 100 Plus
CG12344-PA 449 CG12344-PA 1..449 1..449 2353 100 Plus
CG12344-PD 445 CG12344-PD 1..445 1..449 2318 99.1 Plus
CG12344-PB 445 CG12344-PB 1..445 1..449 2318 99.1 Plus
HisCl1-PB 422 CG14723-PB 62..422 40..445 503 30.3 Plus
HisCl1-PA 426 CG14723-PA 62..347 40..328 501 35.3 Plus
HisCl1-PD 416 CG14723-PD 62..416 40..445 488 30.1 Plus
ort-PA 485 CG7411-PA 42..323 47..331 463 33.3 Plus
Rdl-PD 579 CG10537-PD 69..411 43..395 444 31.6 Plus
Rdl-PG 608 CG10537-PG 69..411 43..395 444 31.6 Plus
Rdl-PF 606 CG10537-PF 69..411 43..395 442 31 Plus
Rdl-PC 606 CG10537-PC 69..411 43..395 442 31.6 Plus
Rdl-PA 606 CG10537-PA 69..411 43..395 442 31 Plus
Rdl-PE 606 CG10537-PE 69..411 43..395 440 31 Plus
Lcch3-PC 496 CG17336-PC 57..496 51..447 433 27.3 Plus
GluClalpha-PP 456 CG7535-PP 20..451 23..447 432 29 Plus
GluClalpha-PO 455 CG7535-PO 20..450 23..447 429 28.1 Plus
GluClalpha-PI 456 CG7535-PI 20..451 23..447 426 27.4 Plus
GluClalpha-PH 447 CG7535-PH 20..442 23..447 424 28.1 Plus
GluClalpha-PM 456 CG7535-PM 20..451 23..447 423 27.4 Plus
GluClalpha-PN 463 CG7535-PN 20..458 23..447 423 27.7 Plus
GluClalpha-PK 447 CG7535-PK 20..442 23..447 421 28.1 Plus
GluClalpha-PJ 457 CG7535-PJ 20..452 23..447 407 26.7 Plus
GluClalpha-PL 448 CG7535-PL 20..443 23..447 405 27.4 Plus
GluClalpha-PF 349 CG7535-PF 20..328 23..328 400 31.8 Plus
CG8916-PC 510 CG8916-PC 17..297 44..328 382 31.8 Plus
CG8916-PB 612 CG8916-PB 119..399 44..328 382 31.8 Plus
CG7589-PB 509 CG7589-PB 71..354 54..331 360 28.9 Plus
CG7589-PA 509 CG7589-PA 71..354 54..331 360 28.9 Plus
pHCl-2-PB 526 CG11340-PB 78..523 37..444 352 25.5 Plus
pHCl-2-PA 526 CG11340-PA 78..523 37..444 352 25.5 Plus
GluClalpha-PE 263 CG7535-PE 4..250 78..328 349 31.6 Plus
CG6927-PA 524 CG6927-PA 66..518 57..441 319 23.9 Plus
pHCl-1-PN 978 CG44099-PN 379..729 49..394 312 26 Plus
pHCl-1-PL 747 CG44099-PL 343..740 44..441 307 24.5 Plus
pHCl-1-PQ 747 CG44099-PQ 343..740 44..441 307 24.5 Plus
pHCl-1-PJ 772 CG44099-PJ 372..765 49..441 306 24.5 Plus
pHCl-1-PM 954 CG44099-PM 372..704 49..381 299 26 Plus
pHCl-1-PD 737 CG44099-PD 350..628 44..328 298 27.1 Plus
pHCl-1-PK 746 CG44099-PK 343..739 44..441 298 23.4 Plus
pHCl-1-PP 754 CG44099-PP 372..646 49..328 297 27.3 Plus
pHCl-1-PH 762 CG44099-PH 379..653 49..328 297 27.3 Plus
pHCl-1-PI 754 CG44099-PI 350..747 44..441 295 24.2 Plus
pHCl-1-PF 779 CG44099-PF 379..772 49..441 294 24.3 Plus
pHCl-1-PO 929 CG44099-PO 343..679 44..381 288 25.6 Plus
pHCl-1-PG 681 CG44099-PG 379..653 49..328 285 26.9 Plus
pHCl-1-PE 762 CG44099-PE 379..653 49..328 285 26.9 Plus
pHCl-1-PR 762 CG44099-PR 379..653 49..328 285 26.9 Plus
HisCl1-PC 233 CG14723-PC 62..202 40..183 227 31.2 Plus
Grd-PA 686 CG7446-PA 120..285 44..213 227 31.4 Plus
Grd-PA 686 CG7446-PA 378..475 233..328 176 39.8 Plus
pHCl-1-PC 637 CG44099-PC 379..536 49..212 162 23.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20653-PA 451 GI20653-PA 1..451 1..449 2221 95.1 Plus
Dmoj\GI22447-PA 425 GI22447-PA 64..350 40..329 503 35.2 Plus
Dmoj\GI22418-PA 482 GI22418-PA 42..323 47..331 460 33.3 Plus
Dmoj\GI15665-PA 498 GI15665-PA 58..498 51..447 419 26.6 Plus
Dmoj\GI22423-PA 493 GI22423-PA 100..488 55..447 409 27.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17174-PA 449 GL17174-PA 1..449 1..449 2255 96.7 Plus
Dper\GL12390-PA 423 GL12390-PA 62..348 40..329 503 35.2 Plus
Dper\GL12670-PA 458 GL12670-PA 20..453 23..447 398 27 Plus
Dper\GL25394-PA 453 GL25394-PA 4..285 72..356 363 30.7 Plus
Dper\GL15583-PA 511 GL15583-PA 75..505 54..441 363 25.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11569-PA 449 GA11569-PA 1..449 1..449 2255 96.7 Plus
Dpse\GA13205-PA 423 GA13205-PA 62..348 40..329 503 35.2 Plus
Dpse\ort-PA 488 GA20331-PA 42..323 47..331 461 33.3 Plus
Dpse\GA20421-PB 452 GA20421-PB 20..447 23..447 432 28.3 Plus
Dpse\GA20421-PA 456 GA20421-PA 20..451 23..447 430 28 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20489-PA 449 GM20489-PA 1..449 1..449 2401 99.8 Plus
Dsec\GM23979-PA 426 GM23979-PA 62..348 40..329 502 35.2 Plus
Dsec\GM26856-PA 485 GM26856-PA 42..323 47..331 461 33.3 Plus
Dsec\GM26860-PA 456 GM26860-PA 20..451 23..447 431 28 Plus
Dsec\GM24889-PA 631 GM24889-PA 69..424 43..357 387 28.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25951-PA 449 GD25951-PA 1..449 1..449 2405 100 Plus
Dsim\GD15261-PA 139 GD15261-PA 1..139 311..449 735 100 Plus
Dsim\ort-PA 485 GD19307-PA 42..323 47..331 461 33.3 Plus
Dsim\GD24824-PA 496 GD24824-PA 57..496 51..447 428 27.2 Plus
Dsim\GD19310-PA 448 GD19310-PA 20..441 23..447 412 27.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20402-PA 451 GJ20402-PA 1..451 1..449 2206 94.5 Plus
Dvir\GJ11009-PA 425 GJ11009-PA 64..350 40..329 503 35.2 Plus
Dvir\ort-PA 482 GJ10978-PA 42..323 47..331 460 33.3 Plus
Dvir\GJ10981-PA 456 GJ10981-PA 20..451 23..447 432 28.1 Plus
Dvir\GJ19199-PA 497 GJ19199-PA 57..342 51..329 417 31.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23273-PA 451 GK23273-PA 1..451 1..449 2343 97.3 Plus
Dwil\GK12944-PA 424 GK12944-PA 64..350 40..329 505 35.5 Plus
Dwil\GK22347-PA 489 GK22347-PA 42..322 47..331 462 33.4 Plus
Dwil\GK22351-PA 454 GK22351-PA 20..449 23..447 427 27.7 Plus
Dwil\GK17727-PA 497 GK17727-PA 57..497 51..447 427 27 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13070-PA 449 GE13070-PA 1..449 1..449 2405 100 Plus
Dyak\GE24203-PA 422 GE24203-PA 62..348 40..329 502 35.2 Plus
Dyak\GE25619-PA 485 GE25619-PA 42..323 47..331 461 33.3 Plus
Dyak\GE25622-PA 456 GE25622-PA 20..451 23..447 431 28 Plus
Dyak\GE17238-PA 496 GE17238-PA 57..496 51..447 425 27.2 Plus

RH55021.hyp Sequence

Translation from 268 to 1617

> RH55021.hyp
MLDKFNTNAFISFGLGFILMWLSEATEAHMNYTAKPRVVLPPNYVKEIRP
PSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDI
FEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKT
VRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDSGV
TLNPELKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHL
IQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGADIPP
VAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRI
SNMEKGQCATVASWEGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQS
LLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPILLMKSS*

RH55021.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG12344-PC 449 CG12344-PC 1..449 1..449 2353 100 Plus
CG12344-PA 449 CG12344-PA 1..449 1..449 2353 100 Plus
CG12344-PD 445 CG12344-PD 1..445 1..449 2318 99.1 Plus
CG12344-PB 445 CG12344-PB 1..445 1..449 2318 99.1 Plus
HisCl1-PB 422 CG14723-PB 62..422 40..445 503 30.3 Plus